Literature DB >> 33180199

Genetic polymorphism investigation of 16 X-STR loci in the Bai ethnic minority in Yunnan Province, Southwest China.

Lili Qing1, Yi Li2, Linlin Liu1, Dengyong Chen1, Jianli Han2, Yuchao Shi3, Renwu Huang4, Xiufeng Zhang5,6, Shengjie Nie7,8, Liping Hu9,10.   

Abstract

To investigate the genetic variation and forensic efficiency of 16 X-chromosomal short tandem repeat (X-STR) loci (DX6795, DXS9902, DXS8378, HPRTB, GATA165B12, DXS7132, DXS7424, DXS6807, DXS6803, GATA172D05, DXS6800, DXS10134, GATA31E08, DXS10159, DXS6789, and DXS6810) in the Bai minority, we calculated allele frequencies, forensic parameters, and haplotype frequencies in 424 (202 males and 222 females) unrelated, healthy Bai individuals from Dali Bai Autonomous Prefecture in Yunnan Province, China. We observed a total of 132 alleles; 5-19 alleles were detected in each locus, and the corresponding allele frequencies ranged from 0.0016 to 0.7589. All of the loci detected were highly polymorphic in the Bai population in Yunnan Province, except DXS6800. The values for the combined power of discrimination in females (PDf) and males (PDm) were 0.999999999999996 and 0.999999997487061, respectively. According to a phylogenetic tree, neighboring populations and different nationalities in the same area appeared to have relatively close evolutionary relationships. This study provides and complements X-chromosome genetic polymorphism data for the Bai people in Yunnan Province, Southwest China, and enriches the available reference materials for this Chinese minority population.
© 2020. Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Bai ethnicity,; Forensic parameters,; Genetic polymorphisms,; X-STR,; Yunnan Province

Mesh:

Year:  2020        PMID: 33180199     DOI: 10.1007/s00414-020-02454-2

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.791


  6 in total

1.  Phylogenetic analysis using PHYLIP.

Authors:  J D Retief
Journal:  Methods Mol Biol       Date:  2000

2.  A new Web site compiling forensic chromosome X research is now online.

Authors:  Reinhard Szibor; Sandra Hering; Jeanett Edelmann
Journal:  Int J Legal Med       Date:  2005-08-25       Impact factor: 2.686

3.  Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material.

Authors:  P S Walsh; D A Metzger; R Higuchi
Journal:  Biotechniques       Date:  1991-04       Impact factor: 1.993

4.  [Genetic structure of X-STR loci in Bai, Dai and Yi ethnic groups and their affinity with five major populations of China].

Authors:  Shu-Guang Wei; Li Yang; Hai-Bo Zheng; Liang Shen; Jiang-Hua Lai
Journal:  Yi Chuan       Date:  2009-02

5.  Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows.

Authors:  Laurent Excoffier; Heidi E L Lischer
Journal:  Mol Ecol Resour       Date:  2010-03-01       Impact factor: 7.090

6.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2016-03-22       Impact factor: 16.240

  6 in total
  2 in total

1.  Development of a multiplex methylation-sensitive restriction enzyme-based SNP typing system for deconvolution of semen-containing mixtures.

Authors:  Zeqin Li; Jintao Li; Yidan Li; Na Liu; Feng Liu; Jianbo Ren; Keming Yun; Jiangwei Yan; Gengqian Zhang
Journal:  Int J Legal Med       Date:  2021-04-04       Impact factor: 2.686

2.  Genetic polymorphisms of 16 X-STR loci in the Hani population from Southwest China.

Authors:  Linlin Liu; Jinyong Yao; Yangzhi Huang; Lei Gao; Jiameng Dai; Xiaokun Yuan; Xiufeng Zhang; Shengjie Nie; Liping Hu
Journal:  Forensic Sci Res       Date:  2021-06-16
  2 in total

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