| Literature DB >> 33178604 |
Yanpeng Chu1,2, Jie Li1, Zhaoping Zeng1, Bin Huang3, Jiaojiao Zhao1, Qin Liu1, Huaping Wu1, Jiangping Fu4, Yin Zhang4, Yefan Zhang5, Jianqiang Cai5, Fanxin Zeng1,6.
Abstract
Introduction: Prognosis prediction is essential to improve therapeutic strategies and to achieve better clinical outcomes in colorectal cancer (CRC) patients. Radiomics based on high-throughput mining of quantitative medical imaging is an emerging field in recent years. However, the relationship among prognosis, radiomics features, and gene expression remains unknown.Entities:
Keywords: CXCL8; colorectal cancer; prognosis; radiomics; transcriptomics
Year: 2020 PMID: 33178604 PMCID: PMC7592598 DOI: 10.3389/fonc.2020.575422
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Characteristics of patients in three studies.
| Age (mean ± SD) | 60.73 ±11.99 | 63.28 ± 10.38 | 63.94 ± 10.02 | 0.082 |
| Sex, No. (%) | 0.974 | |||
| Male | 87 (58.95) | 27 (60.00) | 95 (58.28) | |
| Female | 60 (41.05) | 18 (40.00) | 68 (41.72) | |
| Tumor stage, No. (%) | 0.202 | |||
| 0 | 4 (2.72) | 0 (0.00) | 0 (0.00) | |
| I | 38 (25.85) | 14 (31.11) | 39 (23.93) | |
| II | 40 (27.21) | 10 (22.22) | 59 (36.20) | |
| III | 53 (36.05) | 16 (35.56) | 55 (33.74) | |
| IV | 12 (8.16) | 5 (11.11) | 10 (6.14) | |
| Tumor sites, No. (%) | 0.984 | |||
| Rectum | 100 (68.03) | 31 (68.89) | 109 (66.87) | |
| Right colon | 24 (16.33) | 7 (15.56) | 23 (14.11) | |
| Left colon | 21 (14.29) | 6 (13.33) | 28 (17.18) | |
| Multiple tumors | 2 (1.36) | 1 (2.22) | 3 (1.84) |
The P-value of age: Kruskal-Wallis rank test. The P value of sex, tumor stage, tumor sites: chi-square test.
Figure 1Workflow of the study. IHC, immunohistochemistry; CRC, colorectal cancer.
Figure 2The effect of CXCL8 expression level on the prognosis of colorectal cancer (CRC) patients. (A) Overall survival of melanoma patients with low CXCL8 and high CXCL8 expression (CheckMate 067). (B) Overall survival of renal cell carcinoma patients with low CXCL8 and high CXCL8 expression (CheckMate 025). (C) Volcano plot of differentially expressed genes (DEGs) between low CXCL8 and high CXCL8 groups. (D) Heatmap analysis of DEGs between low CXCL8 and high CXCL8 groups. (E,F) Gene Ontology (GO) analysis of DEGs. (G,H) Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis of DEGs.
Figure 3Development, validation, and performance of radiomics model for assessing CXCL8 expression in the training and testing cohorts. (A) Tuning parameter selection (λ) with 8-fold cross validation in the Least absolute shrinkage and selection operator (LASSO) model. The area under the curve (AUC) of receiver operating characteristic (ROC) curve is plotted against log (λ). The dotted vertical lines represent the optimal values by minimum criteria and the 1 standard error of the minimum (1-SE) criteria. (B) LASSO coefficient profiles of the 87 radiomics features. (C,D) Kolmogorov–Smirnov (KS) curve and ROC curve of radiomics model in assessing CXCL8 expression in the training cohort (N = 99). (E,F) KS curve and ROC curve of radiomics model in assessing CXCL8 expression in the testing cohort (N = 42). (G,H) Calibration belt of the radiomics model for CXCL8 expression assessment in the training and testing cohorts.
Figure 4Performance of radiomics model for CXCL8 assessment in the immunohistochemical testing cohort. (A,B) Kolmogorov–Smirnov (KS) curve and receiver operating characteristic (ROC) curve of the radiomics model for assessing the CXCL8 expression in the immunohistochemical testing cohort (N = 45). KS > 0.2 means that the model has a good prediction accuracy. (C,D) Two typical cases of patients with high and low CXCL8 in tumor tissues by immunohistochemistry and their radiomics score according to the radiomics model.
Figure 5Performance of the combined radiomics model for predicting prognosis in the prognostic testing cohort. (A) Nomogram of the CXCL8-derived combined radiomics model for prognosis prediction. (B) Receiver operating characteristic (ROC) curve comparison of the clinical model, CXCL8-derived radiomics model, and CXCL8-derived combined radiomics model for prognosis prediction in the prognostic testing cohort (N = 163). (C) The decision curve analysis for the above three models. (D) Kaplan–Meier analysis of the overall survival probability in CRC patients stratified by the CXCL8-derived combined radiomics model (High risk vs. Low risk). CRC, colorectal cancer.