Literature DB >> 33178426

Association between H3K36me3 modification and methylation of LINE-1 and MGMT in peripheral blood lymphocytes of PAH-exposed workers.

Xiumei Xing1, Zhini He1, Ziwei Wang1, Ziying Mo1, Liping Chen1, Boyi Yang1, Zhengbao Zhang1, Shen Chen1, Lizhu Ye1, Rui Zhang1, Yuxin Zheng2, Wen Chen1, Daochuan Li1.   

Abstract

To explore the epigenetic alterations in response to DNA damage following polycyclic aromatic hydrocarbons (PAHs) exposure and the crosstalk between different epigenetic regulations, we examined trimethylated Lys 36 of histone H3 (H3K36me3) and methylation of 'long interspersed element-1 (LINE-1)' and 'O 6-methylguanine-DNA methyltransferase (MGMT)' in peripheral blood lymphocytes (PBLCs) of 173 coke oven workers (PAH-exposed group) and 94 non-exposed workers (control group). The PAH-exposed group showed higher internal PAH exposure level, enhanced DNA damage and increased MGMT expression (all P < 0.001). Notably, the methylation of LINE-1 and MGMT decreased by 3.9 and 40.8%, respectively, while H3K36me3 level was 1.7 times higher in PBLCs of PAH-exposed group compared to control group (all P < 0.001). These three epigenetic marks were significantly associated with DNA damage degree (all P < 0.001) and PAH exposure level in a dose-response manner (all P < 0.001). LINE-1 hypomethylation is correlated with enhanced H3K36me3 modification (β = -0.198, P = 0.002), indicating a synergistic effect between histone modification and DNA methylation at the whole genome level. In addition, MGMT expression was positively correlated with H3K36me3 modification (r = 0.253, P < 0.001), but not negatively correlated with MGMT methylation (r = 0.202, P < 0.05). The in vitro study using human bronchial epithelial cells treated with the organic extract of coke oven emissions confirmed that H3K36me3 is important for MGMT expression following PAH exposure. In summary, our study indicates that histone modification and DNA methylation might have synergistic effects on DNA damage induced by PAH exposure at the whole genome level and H3K36me3 is more essential for MGMT expression during the course.
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Entities:  

Keywords:  DNA damage; H3K36me3; LINE-1 methylation; MGMT methylation; occupational PAH exposure

Year:  2020        PMID: 33178426      PMCID: PMC7640917          DOI: 10.1093/toxres/tfaa074

Source DB:  PubMed          Journal:  Toxicol Res (Camb)        ISSN: 2045-452X            Impact factor:   3.524


  45 in total

1.  Genetic damage induced by organic extract of coke oven emissions on human bronchial epithelial cells.

Authors:  Qingfeng Zhai; Huawei Duan; Yadong Wang; Chuanfeng Huang; Yong Niu; Yufei Dai; Ping Bin; Qingjun Liu; Wen Chen; Junxiang Ma; Yuxin Zheng
Journal:  Toxicol In Vitro       Date:  2012-04-11       Impact factor: 3.500

Review 2.  Functions of DNA methylation: islands, start sites, gene bodies and beyond.

Authors:  Peter A Jones
Journal:  Nat Rev Genet       Date:  2012-05-29       Impact factor: 53.242

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Authors:  Howard Cedar; Yehudit Bergman
Journal:  Nat Rev Genet       Date:  2009-05       Impact factor: 53.242

4.  Enhanced H3K4me3 modifications are involved in the transactivation of DNA damage responsive genes in workers exposed to low-level benzene.

Authors:  Jie Li; Xiumei Xing; Xinjie Zhang; Boxuan Liang; Zhini He; Chen Gao; Shan Wang; Fangping Wang; Haiyan Zhang; Shan Zeng; Junling Fan; Liping Chen; Zhengbao Zhang; Bo Zhang; Caixia Liu; Qing Wang; Weiwei Lin; Guanghui Dong; Huanwen Tang; Wen Chen; Yongmei Xiao; Daochuan Li
Journal:  Environ Pollut       Date:  2017-11-22       Impact factor: 8.071

5.  Structural insight into autoinhibition and histone H3-induced activation of DNMT3A.

Authors:  Xue Guo; Ling Wang; Jie Li; Zhanyu Ding; Jianxiong Xiao; Xiaotong Yin; Shuang He; Pan Shi; Liping Dong; Guohong Li; Changlin Tian; Jiawei Wang; Yao Cong; Yanhui Xu
Journal:  Nature       Date:  2014-11-10       Impact factor: 49.962

6.  Silencing effect of CpG island hypermethylation and histone modifications on O6-methylguanine-DNA methyltransferase (MGMT) gene expression in human cancer.

Authors:  Tetsuji Nakagawachi; Hidenobu Soejima; Takeshi Urano; Wei Zhao; Ken Higashimoto; Yuji Satoh; Shiroh Matsukura; Shinichi Kudo; Yoshihiko Kitajima; Haruhito Harada; Koichi Furukawa; Hideki Matsuzaki; Mitsuru Emi; Yusaku Nakabeppu; Kohji Miyazaki; Mutsuo Sekiguchi; Tsunehiro Mukai
Journal:  Oncogene       Date:  2003-12-04       Impact factor: 9.867

7.  High-throughput data integration of RNA-miRNA-circRNA reveals novel insights into mechanisms of benzo[a]pyrene-induced carcinogenicity.

Authors:  Florian Caiment; Stan Gaj; Sandra Claessen; Jos Kleinjans
Journal:  Nucleic Acids Res       Date:  2015-02-17       Impact factor: 16.971

Review 8.  Regulation of expression of O6-methylguanine-DNA methyltransferase and the treatment of glioblastoma (Review).

Authors:  Giulio Cabrini; Enrica Fabbri; Cristiana Lo Nigro; Maria Cristina Dechecchi; Roberto Gambari
Journal:  Int J Oncol       Date:  2015-05-29       Impact factor: 5.650

9.  piRNA pathway targets active LINE1 elements to establish the repressive H3K9me3 mark in germ cells.

Authors:  Dubravka Pezic; Sergei A Manakov; Ravi Sachidanandam; Alexei A Aravin
Journal:  Genes Dev       Date:  2014-06-17       Impact factor: 11.361

10.  Integrative analysis of 111 reference human epigenomes.

Authors:  Anshul Kundaje; Wouter Meuleman; Jason Ernst; Misha Bilenky; Angela Yen; Alireza Heravi-Moussavi; Pouya Kheradpour; Zhizhuo Zhang; Jianrong Wang; Michael J Ziller; Viren Amin; John W Whitaker; Matthew D Schultz; Lucas D Ward; Abhishek Sarkar; Gerald Quon; Richard S Sandstrom; Matthew L Eaton; Yi-Chieh Wu; Andreas R Pfenning; Xinchen Wang; Melina Claussnitzer; Yaping Liu; Cristian Coarfa; R Alan Harris; Noam Shoresh; Charles B Epstein; Elizabeta Gjoneska; Danny Leung; Wei Xie; R David Hawkins; Ryan Lister; Chibo Hong; Philippe Gascard; Andrew J Mungall; Richard Moore; Eric Chuah; Angela Tam; Theresa K Canfield; R Scott Hansen; Rajinder Kaul; Peter J Sabo; Mukul S Bansal; Annaick Carles; Jesse R Dixon; Kai-How Farh; Soheil Feizi; Rosa Karlic; Ah-Ram Kim; Ashwinikumar Kulkarni; Daofeng Li; Rebecca Lowdon; GiNell Elliott; Tim R Mercer; Shane J Neph; Vitor Onuchic; Paz Polak; Nisha Rajagopal; Pradipta Ray; Richard C Sallari; Kyle T Siebenthall; Nicholas A Sinnott-Armstrong; Michael Stevens; Robert E Thurman; Jie Wu; Bo Zhang; Xin Zhou; Arthur E Beaudet; Laurie A Boyer; Philip L De Jager; Peggy J Farnham; Susan J Fisher; David Haussler; Steven J M Jones; Wei Li; Marco A Marra; Michael T McManus; Shamil Sunyaev; James A Thomson; Thea D Tlsty; Li-Huei Tsai; Wei Wang; Robert A Waterland; Michael Q Zhang; Lisa H Chadwick; Bradley E Bernstein; Joseph F Costello; Joseph R Ecker; Martin Hirst; Alexander Meissner; Aleksandar Milosavljevic; Bing Ren; John A Stamatoyannopoulos; Ting Wang; Manolis Kellis
Journal:  Nature       Date:  2015-02-19       Impact factor: 69.504

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  1 in total

Review 1.  Epigenetic alterations induced by genotoxic occupational and environmental human chemical carcinogens: An update of a systematic literature review.

Authors:  Samantha Goodman; Grace Chappell; Kathryn Z Guyton; Igor P Pogribny; Ivan Rusyn
Journal:  Mutat Res Rev Mutat Res       Date:  2021-12-09       Impact factor: 7.015

  1 in total

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