| Literature DB >> 33176719 |
Seung Hun Lee1, Na-Ri Shin1, Choon-Mee Kim2, Sungdo Park3, Na Ra Yun4, Dong-Min Kim5, Dong Sik Jung6.
Abstract
BACKGROUND: Human granulocytic anaplasmosis (HGA) is a tick-borne infectious disease caused by Anaplasma phagocytophilum. To date, there have been no reported cases of A. phagocytophilum infection found in both the biting tick and the patient following a tick bite. CASEEntities:
Keywords: Anaplasma phagocytophilum; Human granulocytic anaplasmosis; Ixodes nipponensis; Tick bites
Mesh:
Substances:
Year: 2020 PMID: 33176719 PMCID: PMC7656494 DOI: 10.1186/s12879-020-05522-5
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Fig. 1Gross findings of the tick removed from the right neck area of the patient. Dorsal view (a) and ventral view (b) of the tick. Identification of Ixodes nipponensis from the phylogenetic tree analysis based on the 16S rRNA gene of the tick of 367-bp amplicons produced from the conventional polymerase chain reaction (c)
Fig. 2Site of the tick bite (right neck area) (a). Suspected morulae in the peripheral blood smear (thick arrow) (b). Diff-Quik stained-peripheral blood smear showing neutrophils with intracellular inclusions (narrow arrows). Original magnification, 1000x (c, d)
Conditions and primers used for PCR, amplified product base pair size, and references used for PCR in this study
| PCR assay | Name of primer seq (5′-3′) | PCR conditions | Product Size (bp) | Reference | |||
|---|---|---|---|---|---|---|---|
| Denaturation | Annealing | Extension | Cycles | ||||
| (°C/sec) | (°C/sec) | (°C/sec) | |||||
| 16 s rRNA PCR for tick identification | 16S - 1-F (CTGCTCAATGAATATTTAAATTGC) | 95/45 | 55/60 | 72/90 | 40 | 450 | ( |
| 16S-1-R (CGGTCTAAACTCAGATCATGTAGG) | |||||||
| ANK-F1 (GAAGAAATTACAACTCCTGAAG) | 95/30 | 53/30 | 72/60 | 35 | 705 | [ | |
| ANK-R1 (CAGCCAGATGCAGTAACGTG) | |||||||
| ANK-F2 (TTGACCGCTGAAGCACTAAC) | 95/30 | 52/30 | 72/60 | 5 | 664 | ||
| ANK-R2 (ACCATTTGCTTCTTGAGGAG) | 95/30 | 54/30 | 72/60 | 25 | |||
| HS1 TGGGCTGGTA(A/C)TGAAAT | 94/60 | 48/120 | 70/90 | 3 | 1300 | [ | |
| HS6 CCICCIGGIACIA(C/T)ACCTTC | 88/60 | 52/120 | 70/90 | 37 | |||
| HS43 AT(A/T)GC(A/T)AA(G/A)GAAGCATAGTC | 94/60 | 48/120 | 70/90 | 3 | 528 | ||
| HS45 ACTTCACG(C/T)(C/T)TCATAGAC | 88/60 | 55/120 | 70/90 | 37 | |||
| R190.70F (ATGGCGAATATTTCTCCAAAAA) | 94/30 | 50/30 | 72/60 | 40 | 634 | [ | |
| RR190.701R (GTTCCGTTAATGGCAGCATCT) | |||||||
| R190.70F (ATGGCGAATATTTCTCCAAAAA) | 94/30 | 51/30 | 72/30 | 5 | 535 | ||
| RR190.602R (AGTGCAGCATTCGCTCCCCCT) | 94/30 | 55/30 | 72/30 | 30 | |||
| 56 kDa N-PCR for | 56BO-144F (YGYAGAATCTRCTCGCTTGG) | 94/60 | 60/60 | 72/60 | 35 | 1250 | In this study |
| 56BO-1395R (agctaMccctRcaccaaBac) | |||||||
| 56BO-406F (CCWCCTCARCCTACTAtrTGC) | 94/30 | 61/30 | 72/45 | 30 | 680 | ||
| 56BO-1088R (gcWgctgctRctgcttcttg) | |||||||
| pyrG-1F (ATTGCAAGTTCTGAGAATA) | 94/20 | 45/30 | 72/30 | 30 | 801 | [ | |
| pyrg-1R (CAAACATTACGAGCAAATTC) | |||||||
| pyrG-2F (GATATGGAAAATATTTTATTTATTG) | 95/30 | 45/30 | 72/30 | 5 | 707 | ||
| pyrg-2R (AAACCAAGACAAATTCCAAG) | 95/30 | 47/30 | 72/30 | 5 | |||
| 95/30 | 49/30 | 72/30 | 25 | ||||
| RT-PCR for SFTSV | MF3 (GATGAGATGGTCCATGCTGATTCT) | 95/20 | 58/40 | 72/30 | 35 | 560 | [ |
| MR2 (CTCATGGGGTGGAATGTCCTCAC) | |||||||
Fig. 3Phylogenetic tree analysis, following groEL and ankA gene-targeted PCR of the patient’s buffy coat at the time of admission and of the tick (a, groEL; b, ankA)
Fig. 4Transmission electron microscopy showing the infection stages of isolated A. phagocytophilum KZ_A3-infected HL-60 cells. Adhesion, replication, invasion, and release stages of the isolated A. phagocytophilum within HL-60 cells (a-d). Representative images of dense-cored cells and reticulate cells; the large arrow indicates a dense nucleoid and a ruffled outer membrane, and the spheroid indicates individual dense-cored cells surrounded by a membranous projection (c). Scanning electron micrograph of a cluster of isolated A. phagocytophilum KZ_A3 within HL-60 cells (e, f) A. phagocytophilum KZ_A3 were observed to replicate in a large vesicle inside the cell. Here, the vesicle has ruptured, revealing A. phagocytophilum (c–d, 20000x)
PCR and antibody test results of the patient
| Sample collection day | PCR | IFA | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56-kDa | SFTS | |||||||||||
| IgG | IgM | IgG | IgM | IgG | IgM | IgG | IgM | |||||
| 2017-05-30 | – | – | – | 1:2048 | < 1:16 | 1:64 | < 1:16 | < 1:80 | < 1:16 | < 1:16 | < 1:16 | |
| 2017-06-02 | 1:1024 | < 1:16 | 1:64 | < 1:16 | ||||||||
| 2017-06-05 | – | – | 1:160 | 1:64 | 1:16 | < 1:16 | ||||||
| 2017-06-07 | 1:512 | < 1:16 | 1:64 | < 1:16 | ||||||||
| 2017-06-20 | – | – | 1:256 | < 1:16 | 1:512 | < 1:16 | 1:640 | 1:64 | 1:32 | < 1:16 | ||
| 2017-06-26 | – | – | 1:512 | < 1:16 | 1:512 | < 1:16 | 1:640 | 1:256 | 1:16 | < 1:16 | ||
| 2017-07-03 | 1:512 | 1:16 | 1:512 | < 1:16 | 1:640 | 1:64 | 1:16 WB+ | 1:16 WB+ | ||||
| 2017-07-20 | 1:512 | < 1:16 | 1:512 | < 1:16 | 1:640 | 1:512 | 1:32 WB+ | 1:16 WB+ | ||||
| 2017-08-04 | 1:512 | < 1:16 | 1:512 | < 1:16 | 1:640 | 1:256 | 1:16 WB+ | 1:16 WB+ | ||||
PCR polymerase chain reaction; IFA indirect immunofluorescence assay; nPCR nested PCR; SFTS severe fever with thrombocytopenia syndrome; C-PCR conventional PCR; WB western blot (Positive means more than 7 antigen bands were detected using the Microgen diagnostic kit)