Literature DB >> 33175503

Heterochirality and Halogenation Control Phe-Phe Hierarchical Assembly.

Slavko Kralj1,2, Ottavia Bellotto1, Evelina Parisi1, Ana M Garcia1, Daniel Iglesias1, Sabrina Semeraro1, Caterina Deganutti1, Paola D'Andrea3, Attilio V Vargiu4, Silvano Geremia1, Rita De Zorzi1, Silvia Marchesan1.   

Abstract

Diphenylalanine is an amyloidogenic building block that can form a versatile array of supramolecular materials. Its shortcomings, however, include the uncontrolled hierarchical assembly into microtubes of heterogeneous size distribution and well-known cytotoxicity. This study rationalized heterochirality as a successful strategy to address both of these pitfalls and it provided an unprotected heterochiral dipeptide that self-organized into a homogeneous and optically clear hydrogel with excellent ability to sustain fibroblast cell proliferation and viability. Substitution of one l-amino acid with its d-enantiomer preserved the ability of the dipeptide to self-organize into nanotubes, as shown by single-crystal XRD analysis, whereby the pattern of electrostatic and hydrogen bonding interactions of the backbone was unaltered. The effect of heterochirality was manifested in subtle changes in the positioning of the aromatic side chains, which resulted in weaker intermolecular interactions between nanotubes. As a result, d-Phe-l-Phe self-organized into homogeneous nanofibrils with a diameter of 4 nm, corresponding to two layers of peptides around a water channel, and yielded a transparent hydrogel. In contrast with homochiral Phe-Phe stereoisomer, it formed stable hydrogels thermoreversibly. d-Phe-l-Phe displayed no amyloid toxicity in cell cultures with fibroblast cells proliferating in high numbers and viability on this biomaterial, marking it as a preferred substrate over tissue-culture plastic. Halogenation also enabled the tailoring of d-Phe-l-Phe self-organization. Fluorination allowed analogous supramolecular packing as confirmed by XRD, thus nanotube formation, and gave intermediate levels of bundling. In contrast, iodination was the most effective strategy to augment the stability of the resulting hydrogel, although at the expense of optical transparency and biocompatibility. Interestingly, iodine presence hindered the supramolecular packing into nanotubes, resulting instead into amphipathic layers of stacked peptides without the occurrence of halogen bonding. By unravelling fine details to control these materials at the meso- and macro-scale, this study significantly advanced our understanding of these systems.

Entities:  

Keywords:  chirality; d-amino acids; halogenation; hydrogels; peptides; phenylalanine; self-assembly

Year:  2020        PMID: 33175503     DOI: 10.1021/acsnano.0c06041

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  12 in total

Review 1.  Self-Assembled Peptide Nanostructures for ECM Biomimicry.

Authors:  Davide Marin; Silvia Marchesan
Journal:  Nanomaterials (Basel)       Date:  2022-06-22       Impact factor: 5.719

2.  Fluorine Effect in the Gelation Ability of Low Molecular Weight Gelators.

Authors:  Paolo Ravarino; Nadia Di Domenico; Marianna Barbalinardo; Davide Faccio; Giuseppe Falini; Demetra Giuri; Claudia Tomasini
Journal:  Gels       Date:  2022-02-08

3.  Self-Assembly of Unprotected Dipeptides into Hydrogels: Water-Channels Make the Difference.

Authors:  Ottavia Bellotto; Slavko Kralj; Michele Melchionna; Paolo Pengo; Matic Kisovec; Marjetka Podobnik; Rita De Zorzi; Silvia Marchesan
Journal:  Chembiochem       Date:  2021-11-26       Impact factor: 3.461

Review 4.  Peptide-Protein Interactions: From Drug Design to Supramolecular Biomaterials.

Authors:  Andrea Caporale; Simone Adorinni; Doriano Lamba; Michele Saviano
Journal:  Molecules       Date:  2021-02-25       Impact factor: 4.411

5.  Nanoscale Assembly of Functional Peptides with Divergent Programming Elements.

Authors:  Ana M Garcia; Michele Melchionna; Ottavia Bellotto; Slavko Kralj; Sabrina Semeraro; Evelina Parisi; Daniel Iglesias; Paola D'Andrea; Rita De Zorzi; Attilio V Vargiu; Silvia Marchesan
Journal:  ACS Nano       Date:  2021-02-12       Impact factor: 15.881

Review 6.  Amyloids as Building Blocks for Macroscopic Functional Materials: Designs, Applications and Challenges.

Authors:  Jingyao Li; Fuzhong Zhang
Journal:  Int J Mol Sci       Date:  2021-10-02       Impact factor: 6.208

Review 7.  Polymer Conjugates of Antimicrobial Peptides (AMPs) with d-Amino Acids (d-aa): State of the Art and Future Opportunities.

Authors:  Ottavia Bellotto; Sabrina Semeraro; Antonella Bandiera; Federica Tramer; Nicola Pavan; Silvia Marchesan
Journal:  Pharmaceutics       Date:  2022-02-19       Impact factor: 6.321

8.  A mixed chirality α-helix in a stapled bicyclic and a linear antimicrobial peptide revealed by X-ray crystallography.

Authors:  Stéphane Baeriswyl; Hippolyte Personne; Ivan Di Bonaventura; Thilo Köhler; Christian van Delden; Achim Stocker; Sacha Javor; Jean-Louis Reymond
Journal:  RSC Chem Biol       Date:  2021-08-20

Review 9.  Diketopiperazine Gels: New Horizons from the Self-Assembly of Cyclic Dipeptides.

Authors:  Marco Scarel; Silvia Marchesan
Journal:  Molecules       Date:  2021-06-03       Impact factor: 4.411

10.  Quantitative Assessment of Chirality of Protein Secondary Structures and Phenylalanine Peptide Nanotubes.

Authors:  Alla Sidorova; Vladimir Bystrov; Aleksey Lutsenko; Denis Shpigun; Ekaterina Belova; Ilya Likhachev
Journal:  Nanomaterials (Basel)       Date:  2021-12-05       Impact factor: 5.076

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