| Literature DB >> 33170163 |
Sandro Michelini1, Marina Cestari2, Serena Michelini3, Giorgio Camilleri4, Luca De Antoni5, Willy Nelson Sonna6, Matteo Bertelli7.
Abstract
Malformations in the lymphatic vasculature, injury, surgery, trauma or toxic damage may lead to swelling of the limbs caused by inefficient lymphatic uptake and flow (lymphedema). Lymphedema can be congenital or acquired. Primary lymphedema is rare and caused by mutations in single genes, secondary lymphedema is more common and caused by a trauma in association with a genetic predisposition. We decided to develop a genetic test that would determine the genetic predisposition to the onset of lymphedema and to predict the course of the disease by analyzing polymorphisms involved in leukotriene B4 (LTB4) synthetic pathway, and variants involved in the onset of secondary lymphedema. There are not many compounds available for the treatment of the negative effects of lymph accumulation, we therefore designed a food supplement based on the hydroxytyrosol, that has anti-oxidant, anti-bacterial and anti-inflammatory activities.Entities:
Year: 2020 PMID: 33170163 PMCID: PMC8023136 DOI: 10.23750/abm.v91i13-S.10658
Source DB: PubMed Journal: Acta Biomed ISSN: 0392-4203
Polymorphisms that can predispose to secondary lymphedema and/or modulated the clinical course of lymphedema
| Chemotaxis mediation of granulocytes and macrophages | rs1950504, A/G | Enhanced ROS generation/AKT phosphorylation under LTB4 low-dose conditions. Enhanced cell motility under low-dose ligand stimulation | 6 | |
| Catalyzes the first step in leukotriene biosynthesis and has a role in inflammatory processes | rs4987105, C/T | Lower 25(OH)D3 and 1,25(OH)2D3, and higher C-reactive protein levels in homozygote CC carriers. This may indicate a chronic inflammatory profile. It modulates the response to the leukotriene antagonist montelukast | 7 | |
| rs59439148, del(GGGGGC)4/3/2/del(G)5C/dup(G)5C/dup(GGGGGC)2/3 | Determination of the expression levels of ALOX5. Two copies of a minor variant of the ALOX5 promoter SP1 tandem repeat polymorphism is associated with increased cysteinyl leukotriene production | 8 | ||
| rs4769874, G/A | GG genotype is associated with modest increase in body mass index. The A-allele potentiates the expression of ALOX5 and/or the function of FLAP | 9 | ||
| Epoxide hydrolase that catalyzes the final step in the biosynthesis of leukotriene B4 | rs17525495, C/T | T allele associated with lower levels of LTA4H. The presence of the T allele significantly increased the proportion of Crohn’s patients requiring glucocorticoids | 10 | |
| rs1978331, C/T | ||||
| Metalloproteinase involved in remodeling of the vasculature, angiogenesis, tissue repair, inflammation | rs1030868, G/A | A allele, higher risk of secondary lymphedema | 11 | |
| rs2241145, G/C | C, higher risk of secondary lymphedema | 11 | ||
| Cell-cell adhesion molecule with roles in angiogenesis, modulation of immune response. Inflammasome activity reduction. Blood vessel remodeling through endothelial cell differentiation and migration. Vascular permeability regulation | rs8110904, G/A | A, higher risk of secondary lymphedema | 11 | |
| rs8111171, G/T | T, higher risk of secondary lymphedema | 11 | ||
| Transcriptional activator. Involved in the mesenchymal tissue formation | rs199772307, G/A | AA genotype more frequent in lymphatic filariasis patients, influence on the severity of lymphedema | 12 | |
| rs34221221, A/G | G allele, increased expression | 13 | ||
| Cellular responses to cytokines and stress. It regulates the immunological response to infections | rs1800629, G/A | High percentage of TNFa homozygotes GG in patients with dermato-lymphangio-adenitis in obstructive lymphedema of lower limbs | 14 | |
| Key role in the innate immune system. It is expressed in macrophages, B lymphocytes, mast cells | rs121917864, C/T | Low percentage of CT heterozygotes and TT homozygotes in patients with dermato-lymphangio-adenitis in obstructive lymphedema of lower limbs | ||
| Key role in the innate immune system. It is expressed in macrophages, B lymphocytes, mast cells | rs4986791, C/T | High percentage of CT heterozygotes and TT homozygotes in patients with dermato-lymphangio-adenitis in obstructive lymphedema of lower limbs | ||
| Growth factor active in angiogenesis, vasculogenesis and endothelial cell growth. Induces endothelial cell proliferation, promotes cell migration, inhibits apoptosis and induces permeabilization of blood vessels | rs699947, C/A | -2578C>A Lower or higher expression | 15 | |
| -1154G>A | A allele, lower expression | 15 | ||
| -460C>T | T allele, increased promoter activity | 15 | ||
| +405G>C | C allele, lower or higher expression | 15 | ||
| +936C>T | T allele, lower expression | 15 | ||
| Role in angiogenesis, tumorigenesis, tissue regeneration | rs5745652, C/T | CC genotype is associated with lower serum HGF levels | 16 | |
| rs2074725, C/A | CA and AA genotypes are associated with lower serum HGF levels | 16 | ||
| Involved in the metabolism of retinoic acid | rs2241057, A/G | G allele associated with higher levels of retinoic acid catabolism and reduced retinoid availability | 17 | |
| Critical role in neurogenesis, development of the heart, eye lens, liver, pancreas and lymphatic system | rs340874, T/C | CC genotype is associated with higher nonesterified fatty acids levels, lower glucose oxidation, higher accumulation of visceral fat | 18 | |
| Essential for lymphoid organogenesis | rs11801866, A/T | T allele, higher risk of secondary lymphedema, might affect transcription factor binding sites | 19 | |
| rs12128071, G/A | It might affect transcription factor binding sites | 19 | ||
| rs12045886, A/G | G allele, secondary lymphedema predisposition after breast cancer surgery | 19 | ||
| T-cell antigen receptor mediated signaling | rs572192, C/T | T allele, secondary lymphedema predisposition after breast cancer surgery | 20 | |
| rs6866733, C/G,T | T allele, secondary lymphedema predisposition after breast cancer surgery | 20 | ||
| rs315721, A/G | AG and GG genotype are associated with a 50% decrease in the odds of developing secondary lymphedema | 20 | ||
| It binds interacts with vascular endothelial growth factor (VEGF) | rs849530, G/T | TT and TG genotype are associated with 62% decrease in the odds of developing secondary lymphedema | 20 | |
| rs849563, T/A,G | G allele, secondary lymphedema predisposition after breast cancer surgery | 20 | ||
| rs16837641, G/A,C,T | A allele, secondary lymphedema predisposition after breast cancer surgery | 20 | ||
| Regulation of innate and adaptive immunity, vascular development. Plays a crucial role in the innate immune response to fungal, bacterial and viral pathogens. Activates the inflammasome and NF-kappa-B-mediated transcription of chemokines and cytokines in presence of pathogens. It is involved in vascular development where it may regulate blood and lymphatic vascular separation | rs158689, T/A | AA and AT genotypes are associated with 3.43-fold increase in the odds of developing secondary lymphedema | 20 | |
| Pathophysiologic role in immune responses and leukocyte emigration to sites of inflammation | rs3176861, C/T | CT and TT genotypes are associated with a 45.0% decrease in the odds of developing secondary lymphedema | 20 | |
| miR-499 gene targets are involved in remodeling and inflammation-related signaling pathways; including fibrogenic and immune-modulator pathways | rs3746444, A/C,G | Associated with inflammatory arthritis susceptibility. The A allele creates an altered target gene set. Disruption of 667 genes of the miR-499a targets and creation of new 763 genes | 21 | |
| Interacts with polycomb repressive complex-1 and -2, leading to epigenetic silencing | rs1333048, A/C,G | AA genotype is associated with elevated C-reactive protein plasma levels | 22 | |
| Receptor for calcitonin-gene-related peptide together with RAMP1 and receptor for adrenomedullin together with RAMP3 and RAMP2 | rs185008808, C/T | Common colds susceptibility | 23 | |
| rs61739909, A/G | Waist-hip ratio | 23 | ||
| rs10177093, G/C,T | Waist-hip ratio | 23 | ||
| Growth factor active in angiogenesis of veins and lymphatics, endothelial cell growth, stimulating their proliferation, migration, permeability of blood vessels | rs2333496, C/T | T allele, waist-hip ratio increase | 24 | |
| rs7664413, C/T | T allele, secondary lymphedema predisposition after breast cancer surgery | 20 | ||
| Regulation of cell adhesion and migration, angiogenesis, blood vessel remodeling, permeability | rs314313, T/A,C,G | G allele, Crohn’s disease/ulcerative colitis/inflammatory bowel disease susceptibility | 25 | |
| rs314311, T/G | T allele, low density lipoprotein cholesterol levels decrease | |||
| Hydrolyzes arachidonyl phospholipids for releasing arachidonic acid. Implicated in the initiation of the inflammatory response. | rs10798069, G/T | G allele, Crohn’s disease/Inflammatory bowel disease | 26 | |
| Mediator involved in cytokine-induced immune and inflammatory responses. | rs949963, C/T | A allele, secondary lymphedema predisposition after breast cancer surgery | 27 | |
| B-cell activation, DNA synthesis stimulation, expression induction of MHC-II on resting B-cells, secretion enhancement and cell surface expression of IgE, IgG, expression regulation CD23 IgE receptor on lymphocytes and monocytes, expression induction of IL31RA in macrophages, autophagy stimulation in dendritic cells | rs2227284, T/C,G | A allele, secondary lymphedema predisposition after breast cancer surgery | 27 | |
| Inducer of the acute phase response, final differentiation of B cells into Ig-secreting cells, lymphocyte and monocyte differentiation, generation of Th17 cells, myokine, increase the breakdown of fats, improve insulin resistance | rs2066992, G/A,C,T | T allele, secondary lymphedema predisposition after breast cancer surgery | 27 | |
| Cytokine produced by monocytes, lymphocytes, pleiotropic effects in immunoregulation, inflammation, down-regulation of Th1 cytokines expression, MHC-II, stimulator of macrophages, B cell survival enhancement, proliferation, antibody production | rs1518111, T/C | T allele, secondary lymphedema predisposition after breast cancer surgery | 27 | |
| rs1518110, A/C,G,T | A allele, secondary lymphedema predisposition after breast cancer surgery | |||
| Pleiotropic transcription factor ubiquitously expressed involved in inflammation, immunity, differentiation, cell growth, tumorigenesis, apoptosis | rs1056890, G/A,C | A allele, secondary lymphedema predisposition after breast cancer surgery | 27 | |
| Endothelial cell migration and proliferation | rs6990020, C/A,T | C allele, secondary lymphedema predisposition after breast cancer surgery | 20 | |
| Embryonic vascular development, postnatal angiogenesis | rs12541742, C/G,T | T allele, secondary lymphedema predisposition after breast cancer surgery | 20 | |
| Lymphangiogenesis and maintenance of the lymphatic endothelium | rs75614493, C/T | C, higher risk of secondary lymphedema | 11 | |
| rs10464063, A/G | G allele, secondary lymphedema predisposition after breast cancer surgery | 19 | ||
| rs307814, G/A | A allele, secondary lymphedema predisposition after breast cancer surgery | |||
| rs307811, C/T | T allele, secondary lymphedema predisposition after breast cancer surgery | |||
| rs11960332, C/T | T allele, secondary lymphedema predisposition after breast cancer surgery | |||
| rs11739214, G/C | C allele, secondary lymphedema predisposition after breast cancer surgery | |||
| Endothelial proliferation, survival, migration, tubular morphogenesis, sprouting. | rs2239702, G/A | A allele, secondary lymphedema predisposition after breast cancer surgery | 19 | |
| rs4576072, A/G | G allele, secondary lymphedema predisposition after breast cancer surgery | |||
| rs10020464, C/A,T | T allele, secondary lymphedema predisposition after breast cancer surgery | 20 | ||
| rs11133360, C/T | C allele, secondary lymphedema predisposition after breast cancer surgery | |||
| High coumarin 7-hydroxylase activity | rs1801272, T/A | A allele, significant reduction of coumarin metabolism | 28 |