Literature DB >> 33169211

Proactive Construction of an Annotated Imaging Database for Artificial Intelligence Training.

Caroline Bivik Stadler1,2, Martin Lindvall3,4, Claes Lundström5,3,4, Anna Bodén5,6,7, Karin Lindman5,6,7, Jeronimo Rose5, Darren Treanor5,6,7,8,9, Johan Blomma10, Karin Stacke3,4, Nicolas Pinchaud11, Martin Hedlund11, Filip Landgren10, Mischa Woisetschläger5,10, Daniel Forsberg3.   

Abstract

Artificial intelligence (AI) holds much promise for enabling highly desired imaging diagnostics improvements. One of the most limiting bottlenecks for the development of useful clinical-grade AI models is the lack of training data. One aspect is the large amount of cases needed and another is the necessity of high-quality ground truth annotation. The aim of the project was to establish and describe the construction of a database with substantial amounts of detail-annotated oncology imaging data from pathology and radiology. A specific objective was to be proactive, that is, to support undefined subsequent AI training across a wide range of tasks, such as detection, quantification, segmentation, and classification, which puts particular focus on the quality and generality of the annotations. The main outcome of this project was the database as such, with a collection of labeled image data from breast, ovary, skin, colon, skeleton, and liver. In addition, this effort also served as an exploration of best practices for further scalability of high-quality image collections, and a main contribution of the study was generic lessons learned regarding how to successfully organize efforts to construct medical imaging databases for AI training, summarized as eight guiding principles covering team, process, and execution aspects.

Entities:  

Keywords:  Annotation; Artificial intelligence; Case collection; Pathology; Radiology

Year:  2020        PMID: 33169211     DOI: 10.1007/s10278-020-00384-4

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.056


  3 in total

1.  Unleashing the potential of digital pathology data by training computer-aided diagnosis models without human annotations.

Authors:  Niccolò Marini; Stefano Marchesin; Sebastian Otálora; Marek Wodzinski; Alessandro Caputo; Mart van Rijthoven; Witali Aswolinskiy; John-Melle Bokhorst; Damian Podareanu; Edyta Petters; Svetla Boytcheva; Genziana Buttafuoco; Simona Vatrano; Filippo Fraggetta; Jeroen van der Laak; Maristella Agosti; Francesco Ciompi; Gianmaria Silvello; Henning Muller; Manfredo Atzori
Journal:  NPJ Digit Med       Date:  2022-07-22

2.  Integrating Biological and Radiological Data in a Structured Repository: a Data Model Applied to the COSMOS Case Study.

Authors:  Noemi Garau; Alessandro Orro; Paul Summers; Lorenza De Maria; Raffaella Bertolotti; Danny Bassis; Marta Minotti; Elvio De Fiori; Guido Baroni; Chiara Paganelli; Cristiano Rampinelli
Journal:  J Digit Imaging       Date:  2022-03-16       Impact factor: 4.903

3.  Pan-tumor CAnine cuTaneous Cancer Histology (CATCH) dataset.

Authors:  Frauke Wilm; Marco Fragoso; Christian Marzahl; Jingna Qiu; Chloé Puget; Laura Diehl; Christof A Bertram; Robert Klopfleisch; Andreas Maier; Katharina Breininger; Marc Aubreville
Journal:  Sci Data       Date:  2022-09-27       Impact factor: 8.501

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.