Literature DB >> 33168591

Fiji plugin for annotating movies with custom arrows.

Stephan Daetwyler1, Carl D Modes2,3,4, Reto Fiolka5,6.   

Abstract

Annotation of time-lapse data provides an important tool to highlight dynamic processes. Particularly, arrows, circles and arrowheads are useful to pinpoint a specific process, stationary or evolving over time. Here, we describe a user-friendly Fiji plugin to facilitate annotation of movies with arrows, arrowheads and circles. The plugin also enables saving and loading of annotated tracks.This article has an associated First Person interview with the first author of the paper.
© 2020. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  Annotation; Arrow; Arrowhead; Fiji plugin; Movie; Time-lapse data

Year:  2020        PMID： 33168591     DOI： 10.1242/bio.056200

Source DB:  PubMed          Journal:  Biol Open        ISSN： 2046-6390            Impact factor:   2.422


  8 in total

1.  Zebrafish fin regeneration involves generic and regeneration-specific osteoblast injury responses.

Authors:  Ivonne Sehring; Hossein Falah Mohammadi; Melanie Haffner-Luntzer; Anita Ignatius; Markus Huber-Lang; Gilbert Weidinger
Journal:  Elife       Date:  2022-06-24       Impact factor: 8.713

2.  Cd59 and inflammation regulate Schwann cell development.

Authors:  Ashtyn T Wiltbank; Emma R Steinson; Stacey J Criswell; Melanie Piller; Sarah Kucenas
Journal:  Elife       Date:  2022-06-24       Impact factor: 8.713

3.  Wnt11 acts on dermomyotome cells to guide epaxial myotome morphogenesis.

Authors:  Ann Kathrin Heilig; Ryohei Nakamura; Atsuko Shimada; Yuka Hashimoto; Yuta Nakamura; Joachim Wittbrodt; Hiroyuki Takeda; Toru Kawanishi
Journal:  Elife       Date:  2022-05-06       Impact factor: 8.713

4.  Hand2 delineates mesothelium progenitors and is reactivated in mesothelioma.

Authors:  Karin D Prummel; Helena L Crowell; Susan Nieuwenhuize; Eline C Brombacher; Stephan Daetwyler; Charlotte Soneson; Jelena Kresoja-Rakic; Agnese Kocere; Manuel Ronner; Alexander Ernst; Zahra Labbaf; David E Clouthier; Anthony B Firulli; Héctor Sánchez-Iranzo; Sundar R Naganathan; Rebecca O'Rourke; Erez Raz; Nadia Mercader; Alexa Burger; Emanuela Felley-Bosco; Jan Huisken; Mark D Robinson; Christian Mosimann
Journal:  Nat Commun       Date:  2022-03-30       Impact factor: 14.919

5.  KRas-transformed epithelia cells invade and partially dedifferentiate by basal cell extrusion.

Authors:  John Fadul; Teresa Zulueta-Coarasa; Gloria M Slattum; Nadja M Redd; Mauricio Franco Jin; Michael J Redd; Stephan Daetwyler; Danielle Hedeen; Jan Huisken; Jody Rosenblatt
Journal:  Nat Commun       Date:  2021-12-10       Impact factor: 14.919

6.  Invadopodia enable cooperative invasion and metastasis of breast cancer cells.

Authors:  Louisiane Perrin; Elizaveta Belova; Battuya Bayarmagnai; Erkan Tüzel; Bojana Gligorijevic
Journal:  Commun Biol       Date:  2022-08-01

7.  Revealing spatio-temporal dynamics with long-term trypanosomatid live-cell imaging.

Authors:  Richard S Muniz; Paul C Campbell; Thomas E Sladewski; Lars D Renner; Christopher L de Graffenried
Journal:  PLoS Pathog       Date:  2022-01-18       Impact factor: 6.823

8.  Liquid-to-solid phase transition of oskar ribonucleoprotein granules is essential for their function in Drosophila embryonic development.

Authors:  Mainak Bose; Marko Lampe; Julia Mahamid; Anne Ephrussi
Journal:  Cell       Date:  2022-03-23       Impact factor: 66.850
  8 in total

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