Literature DB >> 33166392

LitCovid: an open database of COVID-19 literature.

Qingyu Chen1, Alexis Allot1, Zhiyong Lu1.   

Abstract

Since the outbreak of the current pandemic in 2020, there has been a rapid growth of published articles on COVID-19 and SARS-CoV-2, with about 10 000 new articles added each month. This is causing an increasingly serious information overload, making it difficult for scientists, healthcare professionals and the general public to remain up to date on the latest SARS-CoV-2 and COVID-19 research. Hence, we developed LitCovid (https://www.ncbi.nlm.nih.gov/research/coronavirus/), a curated literature hub, to track up-to-date scientific information in PubMed. LitCovid is updated daily with newly identified relevant articles organized into curated categories. To support manual curation, advanced machine-learning and deep-learning algorithms have been developed, evaluated and integrated into the curation workflow. To the best of our knowledge, LitCovid is the first-of-its-kind COVID-19-specific literature resource, with all of its collected articles and curated data freely available. Since its release, LitCovid has been widely used, with millions of accesses by users worldwide for various information needs, such as evidence synthesis, drug discovery and text and data mining, among others. Published by Oxford University Press on behalf of Nucleic Acids Research 2020.

Entities:  

Year:  2020        PMID: 33166392     DOI: 10.1093/nar/gkaa952

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  46 in total

1.  LitSuggest: a web-based system for literature recommendation and curation using machine learning.

Authors:  Alexis Allot; Kyubum Lee; Qingyu Chen; Ling Luo; Zhiyong Lu
Journal:  Nucleic Acids Res       Date:  2021-07-02       Impact factor: 16.971

2.  Parsing Immune Correlates of Protection Against SARS-CoV-2 from Biomedical Literature.

Authors:  Sydney L Foote; Sara Jones; Jane Lockmuller; Liliana Brown; Joseph Breen; Anupama Gururaj
Journal:  AMIA Annu Symp Proc       Date:  2022-02-21

3.  A BERT-based ensemble learning approach for the BioCreative VII challenges: full-text chemical identification and multi-label classification in PubMed articles.

Authors:  Sheng-Jie Lin; Wen-Chao Yeh; Yu-Wen Chiu; Yung-Chun Chang; Min-Huei Hsu; Yi-Shin Chen; Wen-Lian Hsu
Journal:  Database (Oxford)       Date:  2022-07-15       Impact factor: 4.462

4.  Continuous development of the semantic search engine preVIEW: from COVID-19 to long COVID.

Authors:  Lisa Langnickel; Johannes Darms; Katharina Heldt; Denise Ducks; Juliane Fluck
Journal:  Database (Oxford)       Date:  2022-07-01       Impact factor: 4.462

5.  Assigning species information to corresponding genes by a sequence labeling framework.

Authors:  Ling Luo; Chih-Hsuan Wei; Po-Ting Lai; Qingyu Chen; Rezarta Islamaj; Zhiyong Lu
Journal:  Database (Oxford)       Date:  2022-10-13       Impact factor: 4.462

6.  Structure-based drug repurposing against COVID-19 and emerging infectious diseases: methods, resources and discoveries.

Authors:  Yosef Masoudi-Sobhanzadeh; Aysan Salemi; Mohammad M Pourseif; Behzad Jafari; Yadollah Omidi; Ali Masoudi-Nejad
Journal:  Brief Bioinform       Date:  2021-11-05       Impact factor: 11.622

7.  Microbial Science Research in the Post-COVID Environment.

Authors:  Nguyen K Nguyen; Carey-Ann D Burnham; Arturo Casadevall; Mary K Estes; Rebecca V Ferrell; Suzanne M J Fleiszig
Journal:  mBio       Date:  2021-05-28       Impact factor: 7.867

8.  Online Interactive Platform for COVID-19 Literature Visual Analytics: Platform Development Study.

Authors:  Addy Moran; Shawn Hampton; Scott Dowson; John Dagdelen; Amalie Trewartha; Gerbrand Ceder; Kristin Persson; Elise Saxon; Andrew Barker; Lauren Charles; Bobbie-Jo Webb-Robertson
Journal:  J Med Internet Res       Date:  2021-07-16       Impact factor: 5.428

9.  Full-Length Computational Model of the SARS-CoV-2 Spike Protein and Its Implications for a Viral Membrane Fusion Mechanism.

Authors:  Wataru Nishima; Marta Kulik
Journal:  Viruses       Date:  2021-06-11       Impact factor: 5.048

10.  A critical analysis of COVID-19 research literature: Text mining approach.

Authors:  Ferhat D Zengul; Ayse G Zengul; Michael J Mugavero; Nurettin Oner; Bunyamin Ozaydin; Dursun Delen; James H Willig; Kierstin C Kennedy; James Cimino
Journal:  Intell Based Med       Date:  2021-06-17
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