Literature DB >> 33166198

Reimagining T Staging Through Artificial Intelligence and Machine Learning Image Processing Approaches in Digital Pathology.

Kaustav Bera1,2, Ian Katz3, Anant Madabhushi1,4.   

Abstract

Tumor stage and grade, visually assessed by pathologists from evaluation of pathology images in conjunction with radiographic imaging techniques, have been linked to outcome, progression, and survival for a number of cancers. The gold standard of staging in oncology has been the TNM (tumor-node-metastasis) staging system. Though histopathological grading has shown prognostic significance, it is subjective and limited by interobserver variability even among experienced surgical pathologists. Recently, artificial intelligence (AI) approaches have been applied to pathology images toward diagnostic-, prognostic-, and treatment prediction-related tasks in cancer. AI approaches have the potential to overcome the limitations of conventional TNM staging and tumor grading approaches, providing a direct prognostic prediction of disease outcome independent of tumor stage and grade. Broadly speaking, these AI approaches involve extracting patterns from images that are then compared against previously defined disease signatures. These patterns are typically categorized as either (1) handcrafted, which involve domain-inspired attributes, such as nuclear shape, or (2) deep learning (DL)-based representations, which tend to be more abstract. DL approaches have particularly gained considerable popularity because of the minimal domain knowledge needed for training, mostly only requiring annotated examples corresponding to the categories of interest. In this article, we discuss AI approaches for digital pathology, especially as they relate to disease prognosis, prediction of genomic and molecular alterations in the tumor, and prediction of treatment response in oncology. We also discuss some of the potential challenges with validation, interpretability, and reimbursement that must be addressed before widespread clinical deployment. The article concludes with a brief discussion of potential future opportunities in the field of AI for digital pathology and oncology.

Entities:  

Year:  2020        PMID: 33166198      PMCID: PMC7713520          DOI: 10.1200/CCI.20.00110

Source DB:  PubMed          Journal:  JCO Clin Cancer Inform        ISSN: 2473-4276


  69 in total

1.  Artificial intelligence for diagnosis and grading of prostate cancer in biopsies: a population-based, diagnostic study.

Authors:  Peter Ström; Kimmo Kartasalo; Henrik Olsson; Leslie Solorzano; Brett Delahunt; Daniel M Berney; David G Bostwick; Andrew J Evans; David J Grignon; Peter A Humphrey; Kenneth A Iczkowski; James G Kench; Glen Kristiansen; Theodorus H van der Kwast; Katia R M Leite; Jesse K McKenney; Jon Oxley; Chin-Chen Pan; Hemamali Samaratunga; John R Srigley; Hiroyuki Takahashi; Toyonori Tsuzuki; Murali Varma; Ming Zhou; Johan Lindberg; Cecilia Lindskog; Pekka Ruusuvuori; Carolina Wählby; Henrik Grönberg; Mattias Rantalainen; Lars Egevad; Martin Eklund
Journal:  Lancet Oncol       Date:  2020-01-08       Impact factor: 41.316

2.  CT derived radiomic score for predicting the added benefit of adjuvant chemotherapy following surgery in Stage I, II resectable Non-Small Cell Lung Cancer: a retrospective multi-cohort study for outcome prediction.

Authors:  Pranjal Vaidya; Kaustav Bera; Amit Gupta; Xiangxue Wang; Germán Corredor; Pingfu Fu; Niha Beig; Prateek Prasanna; Pradnya Patil; Priya Velu; Prabhakar Rajiah; Robert Gilkeson; Michael Feldman; Humberto Choi; Vamsidhar Velcheti; Anant Madabhushi
Journal:  Lancet Digit Health       Date:  2020-02-13

3.  Fully convolutional networks in multimodal nonlinear microscopy images for automated detection of head and neck carcinoma: Pilot study.

Authors:  Erik Rodner; Thomas Bocklitz; Ferdinand von Eggeling; Günther Ernst; Olga Chernavskaia; Jürgen Popp; Joachim Denzler; Orlando Guntinas-Lichius
Journal:  Head Neck       Date:  2018-12-12       Impact factor: 3.147

Review 4.  Gleason grading and prognostic factors in carcinoma of the prostate.

Authors:  Peter A Humphrey
Journal:  Mod Pathol       Date:  2004-03       Impact factor: 7.842

5.  Prognostic significance of Nottingham histologic grade in invasive breast carcinoma.

Authors:  Emad A Rakha; Maysa E El-Sayed; Andrew H S Lee; Christopher W Elston; Matthew J Grainge; Zsolt Hodi; Roger W Blamey; Ian O Ellis
Journal:  J Clin Oncol       Date:  2008-05-19       Impact factor: 44.544

6.  Nuclear fractal dimension as a prognostic factor in oral squamous cell carcinoma.

Authors:  L Goutzanis; N Papadogeorgakis; P M Pavlopoulos; K Katti; V Petsinis; I Plochoras; C Pantelidaki; N Kavantzas; E Patsouris; C Alexandridis
Journal:  Oral Oncol       Date:  2007-08-09       Impact factor: 5.337

7.  Stain Normalization using Sparse AutoEncoders (StaNoSA): Application to digital pathology.

Authors:  Andrew Janowczyk; Ajay Basavanhally; Anant Madabhushi
Journal:  Comput Med Imaging Graph       Date:  2016-05-16       Impact factor: 4.790

8.  Geospatial immune variability illuminates differential evolution of lung adenocarcinoma.

Authors:  Khalid AbdulJabbar; Shan E Ahmed Raza; Rachel Rosenthal; Mariam Jamal-Hanjani; Selvaraju Veeriah; Ayse Akarca; Tom Lund; David A Moore; Roberto Salgado; Maise Al Bakir; Luis Zapata; Crispin T Hiley; Leah Officer; Marco Sereno; Claire Rachel Smith; Sherene Loi; Allan Hackshaw; Teresa Marafioti; Sergio A Quezada; Nicholas McGranahan; John Le Quesne; Charles Swanton; Yinyin Yuan
Journal:  Nat Med       Date:  2020-05-27       Impact factor: 53.440

9.  Computational pathology of pre-treatment biopsies identifies lymphocyte density as a predictor of response to neoadjuvant chemotherapy in breast cancer.

Authors:  H Raza Ali; Aliakbar Dariush; Elena Provenzano; Helen Bardwell; Jean E Abraham; Mahesh Iddawela; Anne-Laure Vallier; Louise Hiller; Janet A Dunn; Sarah J Bowden; Tamas Hickish; Karen McAdam; Stephen Houston; Mike J Irwin; Paul D P Pharoah; James D Brenton; Nicholas A Walton; Helena M Earl; Carlos Caldas
Journal:  Breast Cancer Res       Date:  2016-02-16       Impact factor: 6.466

10.  Identification of Histological Correlates of Overall Survival in Lower Grade Gliomas Using a Bag-of-words Paradigm: A Preliminary Analysis Based on Hematoxylin & Eosin Stained Slides from the Lower Grade Glioma Cohort of The Cancer Genome Atlas.

Authors:  Reid Trenton Powell; Adriana Olar; Shivali Narang; Ganesh Rao; Erik Sulman; Gregory N Fuller; Arvind Rao
Journal:  J Pathol Inform       Date:  2017-03-10
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  2 in total

Review 1.  History of the SPIE Medical Imaging Digital Pathology Conference.

Authors:  Anant Madabhushi; Metin N Gurcan
Journal:  J Med Imaging (Bellingham)       Date:  2022-02-18

Review 2.  The Role of Artificial Intelligence in Early Cancer Diagnosis.

Authors:  Benjamin Hunter; Sumeet Hindocha; Richard W Lee
Journal:  Cancers (Basel)       Date:  2022-03-16       Impact factor: 6.639

  2 in total

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