Literature DB >> 33161466

Genetic diversity of N-fixing and plant growth-promoting bacterial community in different sugarcane genotypes, association habitat and phenological phase of the crop.

Danubia Ramos Moreira de Lima1, Isaneli Batista Dos Santos2, João Tiago Correia Oliveira3, Diogo Paes da Costa4, João Victor Jansen de Queiroz1, Emiliana Manesco Romagnoli2, Fernando Dini Andreote2, Fernando José Freire5, Júlia Kuklinsky-Sobral4.   

Abstract

This study aimed to evaluate the genetic diversity of bacterial community associated to different sugarcane genotypes, association habitat and phenological phase of the culture, as well as to isolate, to identify and to characterize your potential for plant growth-promoting. Root and rhizospheric soil samples from RB 92579 and RB 867515 varieties were collected at 120 and 300 days after regrowth (DAR). The diversity of bacterial was evaluated through of the 16S rRNA and nifH genes. We found greater genetic diversity in the root endophytic habitat at 120 DAR. We identify the genera Burkholderia sp., Pantoea sp., Erwinia sp., Stenotrophomonas sp., Enterobacter sp. and Pseudomonas sp. The genera Bacillus sp. and Dyella sp. were only identified in the variety RB 92579. We found indices above 50% for biological nitrogen fixation, production of indole acetic acid and phosphate solubilization, showing that the use of these bacteria in biotechnological products is very promising.

Entities:  

Keywords:  BOX-PCR; Biological N fixation; DGGE; Phosphate solubilization; Production of indole acetic acid

Year:  2020        PMID: 33161466     DOI: 10.1007/s00203-020-02103-7

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  8 in total

1.  Comparison of nifH gene pools in soils and soil microenvironments with contrasting properties.

Authors:  F Poly; L Ranjard; S Nazaret; F Gourbière; L J Monrozier
Journal:  Appl Environ Microbiol       Date:  2001-05       Impact factor: 4.792

2.  Diversity of free-living nitrogen-fixing microorganisms in the rhizosphere and non-rhizosphere of pioneer plants growing on wastelands of copper mine tailings.

Authors:  Jing Zhan; Qingye Sun
Journal:  Microbiol Res       Date:  2011-06-12       Impact factor: 5.415

3.  Diversity of endophytic bacteria in Brazilian sugarcane.

Authors:  G S Magnani; C M Didonet; L M Cruz; C F Picheth; F O Pedrosa; E M Souza
Journal:  Genet Mol Res       Date:  2010-02-09

4.  The core root microbiome of sugarcanes cultivated under varying nitrogen fertilizer application.

Authors:  Yun Kit Yeoh; Chanyarat Paungfoo-Lonhienne; Paul G Dennis; Nicole Robinson; Mark A Ragan; Susanne Schmidt; Philip Hugenholtz
Journal:  Environ Microbiol       Date:  2015-07-30       Impact factor: 5.491

5.  Plant growth-promoting rhizobacteria associated with ancient clones of creosote bush (Larrea tridentata).

Authors:  Milko A Jorquera; Baby Shaharoona; Sajid M Nadeem; María de la Luz Mora; David E Crowley
Journal:  Microb Ecol       Date:  2012-05-26       Impact factor: 4.552

6.  Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis.

Authors:  U Nübel; B Engelen; A Felske; J Snaidr; A Wieshuber; R I Amann; W Ludwig; H Backhaus
Journal:  J Bacteriol       Date:  1996-10       Impact factor: 3.490

Review 7.  Plant Growth-Promoting Rhizobacteria: Context, Mechanisms of Action, and Roadmap to Commercialization of Biostimulants for Sustainable Agriculture.

Authors:  Rachel Backer; J Stefan Rokem; Gayathri Ilangumaran; John Lamont; Dana Praslickova; Emily Ricci; Sowmyalakshmi Subramanian; Donald L Smith
Journal:  Front Plant Sci       Date:  2018-10-23       Impact factor: 5.753

Review 8.  A review on the plant microbiome: Ecology, functions, and emerging trends in microbial application.

Authors:  Stéphane Compant; Abdul Samad; Hanna Faist; Angela Sessitsch
Journal:  J Adv Res       Date:  2019-03-20       Impact factor: 10.479

  8 in total
  1 in total

1.  Rapid detection of human origin colistin-resistance genes mcr-1, mcr-3, mcr-8, mcr-10 in clinical fecal samples.

Authors:  Shuangfang Hu; Ziquan Lv; Yang Wang; Jianzhong Shen; Yuebin Ke
Journal:  Arch Microbiol       Date:  2021-06-14       Impact factor: 2.552

  1 in total

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