| Literature DB >> 33156891 |
Jéssica Rodrigues da Silva1, Ana Karolina Leite Pais2, Greecy Mirian Rodrigues Albuquerque2, Adriano Márcio Freire Silva3, Wilson José Silva Junior4, Valdir de Queiroz Balbino4, Maria Esther Noronha Fonseca5, Marco Aurélio Siqueira da Gama2, Elineide Barbosa de Souza6, Rosa de Lima Ramos Mariano2.
Abstract
Ralstonia solanacearum is the causal agent of Moko disease in bananas, which in the state of Sergipe in northeastern Brazil causes "Sergipe facies". This disease induces atypical symptoms similar to those of Bugtok disease in the Philippines. This study was conducted to sequence, assemble, and annotate the genomes of the Sergipe facies-causing isolates SFC and IBSBF2570 (sequevar IIA-53) and compare their genomes with two representative isolates causing Bugtok disease. The genomes were sequenced and assembled, resulting in lengths of 5.58 Mb (SFC) and 5.46 Mb (IBSBF2570) in 185 and 174 contigs, respectively. The isolates of Sergipe facies and Bugtok disease showed similarities in their gene contents. We identified 5,668 information clusters, 3,752 of which were shared by all genomes (core genes). Moreover, 3,585 single-copy genes were identified. Isolates causing Bugtok disease exclusively shared 266 more information clusters than the isolates causing Sergipe facies. These results suggest that Sergipe facies and Bugtok disease isolates show high genomic similarity. However, the similarity is even greater between the Bugtok disease isolates. This may be because of their longer period of interaction compared to Sergipe facies isolates.Entities:
Year: 2020 PMID: 33156891 PMCID: PMC7783953 DOI: 10.1590/1678-4685-GMB-2020-0155
Source DB: PubMed Journal: Genet Mol Biol ISSN: 1415-4757 Impact factor: 1.771