Literature DB >> 33155174

Muricauda brasiliensis sp. nov., isolated from a mat-forming cyanobacterial culture.

Carla Simone Vizzotto1,2, Julianna Peixoto1, Stefan Joshua Green3, Fabyano Alvares C Lopes1,4, Marcelo Henrique S Ramada5,6, Osmindo R Pires Júnior7, Otávio Henrique B Pinto1, Marcos Rogério Tótola8, Fabiano Lopes Thompson9, Ricardo Henrique Krüger10.   

Abstract

Strain K001 was isolated from a cyanobacterial culture derived from Abrolhos, a reef bank microbial mat (South Atlantic Ocean-Brazil). Cells of K001 are Gram stain-negative, catalase and oxidase-positive, non-motile, rod-shaped, and with or without appendages. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain K001 belongs to the genus Muricauda. The highest strain K001 16S rRNA gene identity, ANI, and dDDH, respectively, are with M. aquimarina (98.90%, 79.23, 21.60%), M. ruestringensis (98.20%, 80.82, 23.40%), and M. lutimaris (97.86%, 79.23, 22.70%). The strain grows at 15-37 °C and between 0.5 and 10% NaCl. The major fatty acids of strain K001 are iso-C15:0, iso-C15:1 G, iso-C17:0 3-OH, and summed feature 3 (C16:1 ω6c and/or C16:1 ω7c). The polar lipids are represented by phosphatidylethanolamine, three unidentified aminolipids, and three unidentified polar lipids. The major respiratory quinone is MK-6. The G+C content of the DNA of strain K001 is 41.62 mol%. Based on polyphasic analysis of strain K001, it was identified as a novel representative of the genus Muricauda and was named Muricauda brasiliensis sp. nov. The type strain is K001 (=CBMAI 2315T = CBAS 752T).

Entities:  

Keywords:  Abrolhos reef bank; Cyanobacterial culture; Flavobacteriaceae; Muricauda brasiliensis

Year:  2020        PMID: 33155174      PMCID: PMC7966608          DOI: 10.1007/s42770-020-00400-3

Source DB:  PubMed          Journal:  Braz J Microbiol        ISSN: 1517-8382            Impact factor:   2.476


  43 in total

1.  A rapid method of total lipid extraction and purification.

Authors:  E G BLIGH; W J DYER
Journal:  Can J Biochem Physiol       Date:  1959-08

2.  16S ribosomal DNA amplification for phylogenetic study.

Authors:  W G Weisburg; S M Barns; D A Pelletier; D J Lane
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

Review 3.  Integrating genomics into the taxonomy and systematics of the Bacteria and Archaea.

Authors:  Jongsik Chun; Fred A Rainey
Journal:  Int J Syst Evol Microbiol       Date:  2014-02       Impact factor: 2.747

4.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

5.  Muricauda taeanensis sp. nov., isolated from a marine tidal flat.

Authors:  Jeong Myeong Kim; Hyun Mi Jin; Che Ok Jeon
Journal:  Int J Syst Evol Microbiol       Date:  2013-01-04       Impact factor: 2.747

6.  A large-scale evaluation of algorithms to calculate average nucleotide identity.

Authors:  Seok-Hwan Yoon; Sung-Min Ha; Jeongmin Lim; Soonjae Kwon; Jongsik Chun
Journal:  Antonie Van Leeuwenhoek       Date:  2017-02-15       Impact factor: 2.271

7.  Zeaxanthin biosynthesis by members of the genus Muricauda.

Authors:  Sudharshan Prabhu; P D Rekha; A B Arun
Journal:  Pol J Microbiol       Date:  2014

8.  Muricauda lutimaris sp. nov., isolated from a tidal flat of the Yellow Sea.

Authors:  Jung-Hoon Yoon; So-Jung Kang; Yong-Taek Jung; Tae-Kwang Oh
Journal:  Int J Syst Evol Microbiol       Date:  2008-07       Impact factor: 2.747

9.  Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies.

Authors:  Seok-Hwan Yoon; Sung-Min Ha; Soonjae Kwon; Jeongmin Lim; Yeseul Kim; Hyungseok Seo; Jongsik Chun
Journal:  Int J Syst Evol Microbiol       Date:  2017-05-30       Impact factor: 2.747

10.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

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