Literature DB >> 33151287

DrugCentral 2021 supports drug discovery and repositioning.

Sorin Avram1, Cristian G Bologa2,3, Jayme Holmes2, Giovanni Bocci2, Thomas B Wilson4, Dac-Trung Nguyen5, Ramona Curpan1, Liliana Halip1, Alina Bora1, Jeremy J Yang2, Jeffrey Knockel6, Suman Sirimulla7, Oleg Ursu8, Tudor I Oprea2,8,9,10.   

Abstract

DrugCentral is a public resource (http://drugcentral.org) that serves the scientific community by providing up-to-date drug information, as described in previous papers. The current release includes 109 newly approved (October 2018 through March 2020) active pharmaceutical ingredients in the US, Europe, Japan and other countries; and two molecular entities (e.g. mefuparib) of interest for COVID19. New additions include a set of pharmacokinetic properties for ∼1000 drugs, and a sex-based separation of side effects, processed from FAERS (FDA Adverse Event Reporting System); as well as a drug repositioning prioritization scheme based on the market availability and intellectual property rights forFDA approved drugs. In the context of the COVID19 pandemic, we also incorporated REDIAL-2020, a machine learning platform that estimates anti-SARS-CoV-2 activities, as well as the 'drugs in news' feature offers a brief enumeration of the most interesting drugs at the present moment. The full database dump and data files are available for download from the DrugCentral web portal.
© The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research.

Entities:  

Year:  2021        PMID: 33151287     DOI: 10.1093/nar/gkaa997

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  19 in total

1.  Supervised learning with word embeddings derived from PubMed captures latent knowledge about protein kinases and cancer.

Authors:  Vida Ravanmehr; Hannah Blau; Luca Cappelletti; Tommaso Fontana; Leigh Carmody; Ben Coleman; Joshy George; Justin Reese; Marcin Joachimiak; Giovanni Bocci; Peter Hansen; Carol Bult; Jens Rueter; Elena Casiraghi; Giorgio Valentini; Christopher Mungall; Tudor I Oprea; Peter N Robinson
Journal:  NAR Genom Bioinform       Date:  2021-12-08

2.  InContext: curation of medical context for drug indications.

Authors:  Kody Moodley; Linda Rieswijk; Tudor I Oprea; Michel Dumontier
Journal:  J Biomed Semantics       Date:  2021-02-12

3.  Chemoinformatic Analysis of Psychotropic and Antihistaminic Drugs in the Light of Experimental Anti-SARS-CoV-2 Activities.

Authors:  Bruno O Villoutreix; Rajagopal Krishnamoorthy; Ryad Tamouza; Marion Leboyer; Philippe Beaune
Journal:  Adv Appl Bioinform Chem       Date:  2021-04-12

4.  Therapeutic target database update 2022: facilitating drug discovery with enriched comparative data of targeted agents.

Authors:  Ying Zhou; Yintao Zhang; Xichen Lian; Fengcheng Li; Chaoxin Wang; Feng Zhu; Yunqing Qiu; Yuzong Chen
Journal:  Nucleic Acids Res       Date:  2022-01-07       Impact factor: 16.971

5.  Knowledge graph analytics platform with LINCS and IDG for Parkinson's disease target illumination.

Authors:  Jeremy J Yang; Christopher R Gessner; Joel L Duerksen; Daniel Biber; Jessica L Binder; Murat Ozturk; Brian Foote; Robin McEntire; Kyle Stirling; Ying Ding; David J Wild
Journal:  BMC Bioinformatics       Date:  2022-01-12       Impact factor: 3.169

6.  COVID19db: a comprehensive database platform to discover potential drugs and targets of COVID-19 at whole transcriptomic scale.

Authors:  Wenliang Zhang; Yan Zhang; Zhuochao Min; Jing Mo; Zhen Ju; Wen Guan; Binghui Zeng; Yang Liu; Jianliang Chen; Qianshen Zhang; Hanguang Li; Chunxia Zeng; Yanjie Wei; Godfrey Chi-Fung Chan
Journal:  Nucleic Acids Res       Date:  2022-01-07       Impact factor: 16.971

7.  The IUPHAR/BPS guide to PHARMACOLOGY in 2022: curating pharmacology for COVID-19, malaria and antibacterials.

Authors:  Simon D Harding; Jane F Armstrong; Elena Faccenda; Christopher Southan; Stephen P H Alexander; Anthony P Davenport; Adam J Pawson; Michael Spedding; Jamie A Davies
Journal:  Nucleic Acids Res       Date:  2022-01-07       Impact factor: 16.971

8.  COVIDrugNet: a network-based web tool to investigate the drugs currently in clinical trial to contrast COVID-19.

Authors:  Luca Menestrina; Chiara Cabrelle; Maurizio Recanatini
Journal:  Sci Rep       Date:  2021-09-30       Impact factor: 4.379

9.  PhenCards: a data resource linking human phenotype information to biomedical knowledge.

Authors:  James M Havrilla; Cong Liu; Xiangchen Dong; Chunhua Weng; Kai Wang
Journal:  Genome Med       Date:  2021-05-25       Impact factor: 11.117

10.  BioDWH2: an automated graph-based data warehouse and mapping tool.

Authors:  Marcel Friedrichs
Journal:  J Integr Bioinform       Date:  2021-02-22
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