Literature DB >> 33142602

Transcriptome and co-expression network analysis reveal molecular mechanisms of mucilage formation during seed development in Artemisia sphaerocephala.

Xiaoxu Han1, Lijing Zhang2, Decao Niu1, Shuzhen Nan1, Xiumei Miao1, Xiaowei Hu1, Chengshuai Li1, Hua Fu1.   

Abstract

Seed mucilage has significant economic value. However, the identification of key regulatory genes in mucilage formation and their molecular regulatory mechanism remain unknown. Artemisia sphaerocephala seeds are rich in mucilage. In this study, A. sphaerocephala seeds in 10, 20, 30, 40, 50, 60 and 70 days after flowering were used as materials to reveal their molecular regulatory mechanism in mucilage formation by RNA-sequencing and weighted gene co-expression network analysis (WGCNA). 21 key regulatory genes for mucilage formation were identified, including AsKNAT7 and AsTTG1 genes, as well as AsNAM and AsAP2 gene families. From 10-30 days after flowering, both AsNAM and AsAP2 supported mucilage formation. From 40-70 days after flowering, promotion by AsNAM and AsAP2 was weakened and the up-regulation of AsKNAT7 inhibited mucilage formation, leading to no further increases in mucilage content. This in depth elucidation of seed mucilage formation lays the foundation for the application of mucilage.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Artemisia sphaerocephala; Mucilage formation; Seed development; Transcriptome; WGCNA

Mesh:

Substances:

Year:  2020        PMID: 33142602     DOI: 10.1016/j.carbpol.2020.117044

Source DB:  PubMed          Journal:  Carbohydr Polym        ISSN: 0144-8617            Impact factor:   9.381


  4 in total

1.  Integrative Analyses of Transcriptomes and Metabolomes Reveal Associated Genes and Metabolites with Flowering Regulation in Common Vetch (Vicia sativa L.).

Authors:  Qiang Zhou; Yue Cui; Rui Dong; Dong Luo; Longfa Fang; Zhibiao Nan; Zhipeng Liu
Journal:  Int J Mol Sci       Date:  2022-06-19       Impact factor: 6.208

2.  Key sunitinib-related biomarkers for renal cell carcinoma.

Authors:  Yun Peng; Shiqiang Dong; Yuxuan Song; Dingkun Hou; Lili Wang; Bowen Li; Haitao Wang
Journal:  Cancer Med       Date:  2021-08-17       Impact factor: 4.452

3.  Transcriptome and Coexpression Network Analyses Provide In-Sights into the Molecular Mechanisms of Hydrogen Cyanide Synthesis during Seed Development in Common Vetch (Vicia sativa L.).

Authors:  Mingyu Li; Lu Zhao; Qiang Zhou; Longfa Fang; Dong Luo; Wenxian Liu; Iain Robert Searle; Zhipeng Liu
Journal:  Int J Mol Sci       Date:  2022-02-18       Impact factor: 5.923

Review 4.  Nonconventional Hydrocolloids' Technological and Functional Potential for Food Applications.

Authors:  Sandra Viviana Medina-López; Carlos Mario Zuluaga-Domínguez; Juan Pablo Fernández-Trujillo; María Soledad Hernández-Gómez
Journal:  Foods       Date:  2022-01-30
  4 in total

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