Literature DB >> 33140449

Transcriptomic responses from improved murine sepsis models can better mimic human surgical sepsis.

Philip A Efron1, Dijoia B Darden1, Zhongkai Wang2, Dina C Nacionales1, Maria-Cecilia Lopez3, Russell B Hawkins1, Michael C Cox1, Jaimar C Rincon1, Ricardo Ungaro1, Marvin L Dirain1, Gabriela L Ghita2, Tianmeng Chen4, Timothy R Billiar4, Matthew J Delano5, Christiaan Leeuwenburgh6, Azra Bihorac7, Scott C Brakenridge1, Frederick A Moore1, Alicia M Mohr1, Ronald G Tompkins8, Babette A Brumback2, Henry V Baker3, Gilbert R Upchurch1, Lyle L Moldawer1.   

Abstract

Historically, murine models of inflammation in biomedical research have been shown to minimally correlate with genomic expression patterns from blood leukocytes in humans. In 2019, our laboratory reported an improved surgical sepsis model of cecal ligation and puncture (CLP) that provides additional daily chronic stress (DCS), as well as adhering to the Minimum Quality Threshold in Pre-Clinical Sepsis Studies (MQTiPSS) guidelines. This model phenotypically recapitulates the persistent inflammation, immunosuppression, and catabolism syndrome observed in adult human surgical sepsis survivors. Whether these phenotypic similarities between septic humans and mice are replicated at the circulating blood leukocyte transcriptome has not been demonstrated. Our analysis, in contrast with previous findings, demonstrated that genome-wide expression in our new murine model more closely approximated human surgical sepsis patients, particularly in the more chronic phases of sepsis. Importantly, our new model of murine surgical sepsis with chronic stress did not reflect well gene expression patterns from humans with community-acquired sepsis. Our work indicates that improved preclinical murine sepsis modeling can better replicate both the phenotypic and transcriptomic responses to surgical sepsis, but cannot be extrapolated to other sepsis etiologies. Importantly, these improved models can be a useful adjunct to human-focused and artificial intelligence-based forms of research in order to improve septic patients' morbidity and mortality.
© 2020 Federation of American Societies for Experimental Biology.

Entities:  

Keywords:  inflammation; sepsis; transcriptome; translational medicine

Mesh:

Year:  2020        PMID: 33140449      PMCID: PMC7855423          DOI: 10.1096/fj.202002150R

Source DB:  PubMed          Journal:  FASEB J        ISSN: 0892-6638            Impact factor:   5.834


  57 in total

1.  Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.

Authors:  M Ashburner; C A Ball; J A Blake; D Botstein; H Butler; J M Cherry; A P Davis; K Dolinski; S S Dwight; J T Eppig; M A Harris; D P Hill; L Issel-Tarver; A Kasarskis; S Lewis; J C Matese; J E Richardson; M Ringwald; G M Rubin; G Sherlock
Journal:  Nat Genet       Date:  2000-05       Impact factor: 38.330

2.  Computer versus paper system for recognition and management of sepsis in surgical intensive care.

Authors:  Chasen A Croft; Frederick A Moore; Philip A Efron; Peggy S Marker; Andrea Gabrielli; Lynn S Westhoff; Lawrence Lottenberg; Janeen Jordan; Victoria Klink; R Matthew Sailors; Bruce A McKinley
Journal:  J Trauma Acute Care Surg       Date:  2014-02       Impact factor: 3.313

Review 3.  2001 SCCM/ESICM/ACCP/ATS/SIS International Sepsis Definitions Conference.

Authors:  Mitchell M Levy; Mitchell P Fink; John C Marshall; Edward Abraham; Derek Angus; Deborah Cook; Jonathan Cohen; Steven M Opal; Jean-Louis Vincent; Graham Ramsay
Journal:  Crit Care Med       Date:  2003-04       Impact factor: 7.598

4.  Serial evaluation of the SOFA score to predict outcome in critically ill patients.

Authors:  F L Ferreira; D P Bota; A Bross; C Mélot; J L Vincent
Journal:  JAMA       Date:  2001-10-10       Impact factor: 56.272

5.  PD-1/PD-L1 interactions contribute to functional T-cell impairment in patients who relapse with cancer after allogeneic stem cell transplantation.

Authors:  Wieger J Norde; Frans Maas; Willemijn Hobo; Alan Korman; Michael Quigley; Michel G D Kester; Konnie Hebeda; J H Frederik Falkenburg; Nicolaas Schaap; Theo M de Witte; Robbert van der Voort; Harry Dolstra
Journal:  Cancer Res       Date:  2011-06-09       Impact factor: 12.701

6.  Premise for Standardized Sepsis Models.

Authors:  Daniel G Remick; Alfred Ayala; Irshad H Chaudry; Craig M Coopersmith; Clifford Deutschman; Judith Hellman; Lyle Moldawer; Marcin F Osuchowski
Journal:  Shock       Date:  2019-01       Impact factor: 3.454

7.  Genomic responses in mouse models greatly mimic human inflammatory diseases.

Authors:  Keizo Takao; Tsuyoshi Miyakawa
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-04       Impact factor: 11.205

8.  Evidence for Persistent Immune Suppression in Patients Who Develop Chronic Critical Illness After Sepsis.

Authors:  Julie A Stortz; Tyler J Murphy; Steven L Raymond; Juan C Mira; Ricardo Ungaro; Marvin L Dirain; Dina C Nacionales; Tyler J Loftus; Zhongkai Wang; Tezcan Ozrazgat-Baslanti; Gabriela L Ghita; Babette A Brumback; Alicia M Mohr; Azra Bihorac; Philip A Efron; Lyle L Moldawer; Frederick A Moore; Scott C Brakenridge
Journal:  Shock       Date:  2018-03       Impact factor: 3.454

Review 9.  Sepsis and septic shock.

Authors:  Maurizio Cecconi; Laura Evans; Mitchell Levy; Andrew Rhodes
Journal:  Lancet       Date:  2018-06-21       Impact factor: 79.321

10.  Advanced age is associated with worsened outcomes and a unique genomic response in severely injured patients with hemorrhagic shock.

Authors:  Erin L Vanzant; Rachael E Hilton; Cecilia M Lopez; Jianyi Zhang; Ricardo F Ungaro; Lori F Gentile; Benjamin E Szpila; Ronald V Maier; Joseph Cuschieri; Azra Bihorac; Christiaan Leeuwenburgh; Frederick A Moore; Henry V Baker; Lyle L Moldawer; Scott C Brakenridge; Philip A Efron
Journal:  Crit Care       Date:  2015-03-04       Impact factor: 9.097

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  4 in total

1.  Beneficial Effects of O-GlcNAc Stimulation in a Young Rat Model of Sepsis: Beyond Modulation of Gene Expression.

Authors:  Thomas Dupas; Antoine Persello; Angélique Blangy-Letheule; Manon Denis; Angélique Erraud; Virginie Aillerie; Aurélia A Leroux; Matthieu Rivière; Jacques Lebreton; Arnaud Tessier; Bertrand Rozec; Benjamin Lauzier
Journal:  Int J Mol Sci       Date:  2022-06-09       Impact factor: 6.208

2.  Influence of age and sex on microRNA response and recovery in the hippocampus following sepsis.

Authors:  Asha Rani; Jolie Barter; Ashok Kumar; Julie A Stortz; McKenzie Hollen; Dina Nacionales; Lyle L Moldawer; Philip A Efron; Thomas C Foster
Journal:  Aging (Albany NY)       Date:  2022-01-30       Impact factor: 5.682

Review 3.  Of mice and men: Laboratory murine models for recapitulating the immunosuppression of human sepsis.

Authors:  Ning Wang; Yongling Lu; Jiang Zheng; Xin Liu
Journal:  Front Immunol       Date:  2022-08-05       Impact factor: 8.786

4.  Sex differences associate with late microbiome alterations after murine surgical sepsis.

Authors:  Philip Alexander Efron; Dijoia B Darden; Eric C Li; Jennifer Munley; Lauren Kelly; Brittany Fenner; Dina C Nacionales; Ricardo F Ungaro; Marvin L Dirain; Jaimar Rincon; Robert T Mankowski; Christiaan Leeuwenburgh; Fredrick A Moore; Scott C Brakenridge; Thomas C Foster; Orlando Laitano; Gemma Casadesus; Lyle L Moldawer; Alicia M Mohr; Ryan M Thomas
Journal:  J Trauma Acute Care Surg       Date:  2022-03-24       Impact factor: 3.697

  4 in total

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