Literature DB >> 33139572

Spatial and temporal diversity of glycome expression in mammalian brain.

Jua Lee1,2, Seungshin Ha3, Minsoo Kim3, Seong-Wook Kim3, Jaekyung Yun1,2, Sureyya Ozcan4,5, Heeyoun Hwang6, In Jung Ji1,2, Dongtan Yin1,2, Maree J Webster7, Cynthia Shannon Weickert8,9,10, Jae-Han Kim11, Jong Shin Yoo1,6, Rudolf Grimm1,12, Sabine Bahn4, Hee-Sup Shin13, Hyun Joo An14,2.   

Abstract

Mammalian brain glycome remains a relatively poorly understood area compared to other large-scale "omics" studies, such as genomics and transcriptomics due to the inherent complexity and heterogeneity of glycan structure and properties. Here, we first performed spatial and temporal analysis of glycome expression patterns in the mammalian brain using a cutting-edge experimental tool based on liquid chromatography-mass spectrometry, with the ultimate aim to yield valuable implications on molecular events regarding brain functions and development. We observed an apparent diversity in the glycome expression patterns, which is spatially well-preserved among nine different brain regions in mouse. Next, we explored whether the glycome expression pattern changes temporally during postnatal brain development by examining the prefrontal cortex (PFC) at different time point across six postnatal stages in mouse. We found that glycan expression profiles were dynamically regulated during postnatal developments. A similar result was obtained in PFC samples from humans ranging in age from 39 d to 49 y. Novel glycans unique to the brain were also identified. Interestingly, changes primarily attributed to sialylated and fucosylated glycans were extensively observed during PFC development. Finally, based on the vast heterogeneity of glycans, we constructed a core glyco-synthesis map to delineate the glycosylation pathway responsible for the glycan diversity during the PFC development. Our findings reveal high levels of diversity in a glycosylation program underlying brain region specificity and age dependency, and may lead to new studies exploring the role of glycans in spatiotemporally diverse brain functions.

Entities:  

Keywords:  LC-MS; brain; glycosylation; mammalian; spatiotemporal

Mesh:

Substances:

Year:  2020        PMID: 33139572      PMCID: PMC7682437          DOI: 10.1073/pnas.2014207117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  47 in total

1.  The extracellular matrix molecule tenascin-R and its HNK-1 carbohydrate modulate perisomatic inhibition and long-term potentiation in the CA1 region of the hippocampus.

Authors:  A K Saghatelyan; S Gorissen; M Albert; B Hertlein; M Schachner; A Dityatev
Journal:  Eur J Neurosci       Date:  2000-09       Impact factor: 3.386

Review 2.  Metabolomics of human brain aging and age-related neurodegenerative diseases.

Authors:  Mariona Jové; Manuel Portero-Otín; Alba Naudí; Isidre Ferrer; Reinald Pamplona
Journal:  J Neuropathol Exp Neurol       Date:  2014-07       Impact factor: 3.685

3.  The expanding beta 4-galactosyltransferase gene family: messages from the databanks.

Authors:  N W Lo; J H Shaper; J Pevsner; N L Shaper
Journal:  Glycobiology       Date:  1998-05       Impact factor: 4.313

Review 4.  Glycosphingolipids in cellular interaction, differentiation, and oncogenesis.

Authors:  S Hakomori
Journal:  Annu Rev Biochem       Date:  1981       Impact factor: 23.643

5.  Alpha-mannosidase-II deficiency results in dyserythropoiesis and unveils an alternate pathway in oligosaccharide biosynthesis.

Authors:  D Chui; M Oh-Eda; Y F Liao; K Panneerselvam; A Lal; K W Marek; H H Freeze; K W Moremen; M N Fukuda; J D Marth
Journal:  Cell       Date:  1997-07-11       Impact factor: 41.582

6.  Designation of fingerprint glycopeptides for targeted glycoproteomic analysis of serum haptoglobin: insights into gastric cancer biomarker discovery.

Authors:  Jua Lee; Serenus Hua; Sung Hyeon Lee; Myung Jin Oh; Jaekyung Yun; Jin Young Kim; Jae-Han Kim; Jung Hoe Kim; Hyun Joo An
Journal:  Anal Bioanal Chem       Date:  2017-12-29       Impact factor: 4.142

7.  Conversion of brain-specific complex type sugar chains by N-acetyl-beta-D-hexosaminidase B.

Authors:  Y Okamoto; K Omichi; S Yamanaka; K Ikenaka; S Hase
Journal:  J Biochem       Date:  1999-03       Impact factor: 3.387

Review 8.  Why Is N-Glycolylneuraminic Acid Rare in the Vertebrate Brain?

Authors:  Leela R L Davies; Ajit Varki
Journal:  Top Curr Chem       Date:  2015

9.  A comprehensive transcriptional map of primate brain development.

Authors:  Trygve E Bakken; Jeremy A Miller; Song-Lin Ding; Susan M Sunkin; Kimberly A Smith; Lydia Ng; Aaron Szafer; Rachel A Dalley; Joshua J Royall; Tracy Lemon; Sheila Shapouri; Kaylynn Aiona; James Arnold; Jeffrey L Bennett; Darren Bertagnolli; Kristopher Bickley; Andrew Boe; Krissy Brouner; Stephanie Butler; Emi Byrnes; Shiella Caldejon; Anita Carey; Shelby Cate; Mike Chapin; Jefferey Chen; Nick Dee; Tsega Desta; Tim A Dolbeare; Nadia Dotson; Amanda Ebbert; Erich Fulfs; Garrett Gee; Terri L Gilbert; Jeff Goldy; Lindsey Gourley; Ben Gregor; Guangyu Gu; Jon Hall; Zeb Haradon; David R Haynor; Nika Hejazinia; Anna Hoerder-Suabedissen; Robert Howard; Jay Jochim; Marty Kinnunen; Ali Kriedberg; Chihchau L Kuan; Christopher Lau; Chang-Kyu Lee; Felix Lee; Lon Luong; Naveed Mastan; Ryan May; Jose Melchor; Nerick Mosqueda; Erika Mott; Kiet Ngo; Julie Nyhus; Aaron Oldre; Eric Olson; Jody Parente; Patrick D Parker; Sheana Parry; Julie Pendergraft; Lydia Potekhina; Melissa Reding; Zackery L Riley; Tyson Roberts; Brandon Rogers; Kate Roll; David Rosen; David Sandman; Melaine Sarreal; Nadiya Shapovalova; Shu Shi; Nathan Sjoquist; Andy J Sodt; Robbie Townsend; Lissette Velasquez; Udi Wagley; Wayne B Wakeman; Cassandra White; Crissa Bennett; Jennifer Wu; Rob Young; Brian L Youngstrom; Paul Wohnoutka; Richard A Gibbs; Jeffrey Rogers; John G Hohmann; Michael J Hawrylycz; Robert F Hevner; Zoltán Molnár; John W Phillips; Chinh Dang; Allan R Jones; David G Amaral; Amy Bernard; Ed S Lein
Journal:  Nature       Date:  2016-07-13       Impact factor: 49.962

10.  Microfluidic Chip-LC/MS-based Glycomic Analysis Revealed Distinct N-glycan Profile of Rat Serum.

Authors:  Wei-Na Gao; Lee-Fong Yau; Liang Liu; Xing Zeng; Da-Can Chen; Min Jiang; Ju Liu; Jing-Rong Wang; Zhi-Hong Jiang
Journal:  Sci Rep       Date:  2015-08-07       Impact factor: 4.379

View more
  17 in total

1.  Glycomic profiling and the mammalian brain.

Authors:  Jennyfer Tena; Carlito B Lebrilla
Journal:  Proc Natl Acad Sci U S A       Date:  2021-01-05       Impact factor: 11.205

2.  Glycosylation and Aging.

Authors:  Ana Cindrić; Jasminka Krištić; Marina Martinić Kavur; Marija Pezer
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 3.650

3.  Post-Translational Modifications During Brain Development.

Authors:  Bradley J Smith; Victor Corasolla Carregari
Journal:  Adv Exp Med Biol       Date:  2022       Impact factor: 3.650

4.  Exploring serum glycome patterns after moderate to severe traumatic brain injury: A prospective pilot study.

Authors:  Stefania Mondello; Viktor Sandner; Mona Goli; Endre Czeiter; Krisztina Amrein; Patrick M Kochanek; Sakshi Gautam; Byeong Gwan Cho; Ryan Morgan; Ali Nehme; Giacomo Fiumara; Ali H Eid; Chloe Barsa; Muhammad Ali Haidar; Andras Buki; Firas H Kobeissy; Yehia Mechref
Journal:  EClinicalMedicine       Date:  2022-06-17

5.  An Integrated Mass Spectrometry-Based Glycomics-Driven Glycoproteomics Analytical Platform to Functionally Characterize Glycosylation Inhibitors.

Authors:  Michael Russelle S Alvarez; Qingwen Zhou; Sheryl Joyce B Grijaldo; Carlito B Lebrilla; Ruel C Nacario; Francisco M Heralde; Jomar F Rabajante; Gladys C Completo
Journal:  Molecules       Date:  2022-06-14       Impact factor: 4.927

6.  Complete spatial characterisation of N-glycosylation upon striatal neuroinflammation in the rodent brain.

Authors:  Ana Lúcia Rebelo; Francesco Gubinelli; Pauline Roost; Caroline Jan; Emmanuel Brouillet; Nadja Van Camp; Richard R Drake; Radka Saldova; Abhay Pandit
Journal:  J Neuroinflammation       Date:  2021-05-16       Impact factor: 8.322

Review 7.  Spatiotemporal diversity and regulation of glycosaminoglycans in cell homeostasis and human disease.

Authors:  Amrita Basu; Neil G Patel; Elijah D Nicholson; Ryan J Weiss
Journal:  Am J Physiol Cell Physiol       Date:  2022-03-16       Impact factor: 5.282

8.  Mammalian brain glycoproteins exhibit diminished glycan complexity compared to other tissues.

Authors:  Sarah E Williams; Maxence Noel; Sylvain Lehoux; Murat Cetinbas; Ramnik J Xavier; Ruslan I Sadreyev; Edward M Scolnick; Jordan W Smoller; Richard D Cummings; Robert G Mealer
Journal:  Nat Commun       Date:  2022-01-12       Impact factor: 17.694

Review 9.  Glycosylation in Axonal Guidance.

Authors:  Sampada P Mutalik; Stephanie L Gupton
Journal:  Int J Mol Sci       Date:  2021-05-13       Impact factor: 5.923

10.  Towards Mapping of the Human Brain N-Glycome with Standardized Graphitic Carbon Chromatography.

Authors:  Johannes Helm; Lena Hirtler; Friedrich Altmann
Journal:  Biomolecules       Date:  2022-01-06
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.