Literature DB >> 33127469

Epigenetic regulators of neuronal ferroptosis identify novel therapeutics for neurological diseases: HDACs, transglutaminases, and HIF prolyl hydroxylases.

Orjon Rroji1, Amit Kumar1, Saravanan S Karuppagounder1, Rajiv R Ratan2.   

Abstract

A major thrust of our laboratory has been to identify how physiological stress is transduced into transcriptional responses that feed back to overcome the inciting stress or its consequences, thereby fostering survival and repair. To this end, we have adopted the use of an in vitro model of ferroptosis, a caspase-independent, but iron-dependent form of cell death (Dixon et al., 2012; Ratan, 2020). In this review, we highlight three distinct epigenetic targets that have evolved from our studies and which have been validated in vivo studies. In the first section, we discuss our studies of broad, pan-selective histone deacetylase (HDAC) inhibitors in ferroptosis and how these studies led to the validation of HDAC inhibitors as candidate therapeutics in a host of disease models. In the second section, we discuss our studies that revealed a role for transglutaminase as an epigenetic modulator of proferroptotic pathways and how these studies set the stage for recent elucidation of monoamines as post-translation modifiers of histone function. In the final section, we discuss our studies of iron-, 2-oxoglutarate-, and oxygen-dependent dioxygenases and the role of one family of these enzymes, the HIF prolyl hydroxylases, in mediating transcriptional events necessary for ferroptosis in vitro and for dysfunction in a host of neurological conditions. Overall, our studies highlight the importance of epigenetic proteins in mediating prodeath and prosurvival responses to ferroptosis. Pharmacological agents that target these epigenetic proteins are showing robust beneficial effects in diverse rodent models of stroke, Parkinson's disease, Huntington's disease, and Alzheimer's disease.
Copyright © 2020 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Epigenetics; Ferroptosis; HDAC; HIF prolyl hydroxylase; Transglutaminase

Mesh:

Substances:

Year:  2020        PMID: 33127469      PMCID: PMC7797188          DOI: 10.1016/j.nbd.2020.105145

Source DB:  PubMed          Journal:  Neurobiol Dis        ISSN: 0969-9961            Impact factor:   5.996


  60 in total

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Authors:  Hoon Ryu; Junghee Lee; Khalequz Zaman; James Kubilis; Robert J Ferrante; Brian D Ross; Rachael Neve; Rajiv R Ratan
Journal:  J Neurosci       Date:  2003-05-01       Impact factor: 6.167

Review 2.  Transglutaminase is a therapeutic target for oxidative stress, excitotoxicity and stroke: a new epigenetic kid on the CNS block.

Authors:  Manuela Basso; Rajiv R Ratan
Journal:  J Cereb Blood Flow Metab       Date:  2013-04-10       Impact factor: 6.200

3.  A conserved family of prolyl-4-hydroxylases that modify HIF.

Authors:  R K Bruick; S L McKnight
Journal:  Science       Date:  2001-10-11       Impact factor: 47.728

4.  Protection from oxidative stress-induced apoptosis in cortical neuronal cultures by iron chelators is associated with enhanced DNA binding of hypoxia-inducible factor-1 and ATF-1/CREB and increased expression of glycolytic enzymes, p21(waf1/cip1), and erythropoietin.

Authors:  K Zaman; H Ryu; D Hall; K O'Donovan; K I Lin; M P Miller; J C Marquis; J M Baraban; G L Semenza; R R Ratan
Journal:  J Neurosci       Date:  1999-11-15       Impact factor: 6.167

5.  Histone deacetylase inhibitors prevent oxidative neuronal death independent of expanded polyglutamine repeats via an Sp1-dependent pathway.

Authors:  Hoon Ryu; Junghee Lee; Beatrix A Olofsson; Aziza Mwidau; Alpaslan Dedeoglu; Maria Escudero; Erik Flemington; Jane Azizkhan-Clifford; Robert J Ferrante; Rajiv R Ratan; Alpaslan Deodoglu
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-14       Impact factor: 11.205

Review 6.  The Chemical Biology of Ferroptosis in the Central Nervous System.

Authors:  Rajiv R Ratan
Journal:  Cell Chem Biol       Date:  2020-04-02       Impact factor: 8.116

7.  Up-regulation of mitogen-activated protein kinases ERK1/2 and MEK1/2 is associated with the progression of neurofibrillary degeneration in Alzheimer's disease.

Authors:  Jin-Jing Pei; Heiko Braak; Wen-Lin An; Bengt Winblad; Richard F Cowburn; Khalid Iqbal; Inge Grundke-Iqbal
Journal:  Brain Res Mol Brain Res       Date:  2002-12-30

8.  RAS-RAF-MEK-dependent oxidative cell death involving voltage-dependent anion channels.

Authors:  Nicholas Yagoda; Moritz von Rechenberg; Elma Zaganjor; Andras J Bauer; Wan Seok Yang; Daniel J Fridman; Adam J Wolpaw; Inese Smukste; John M Peltier; J Jay Boniface; Richard Smith; Stephen L Lessnick; Sudhir Sahasrabudhe; Brent R Stockwell
Journal:  Nature       Date:  2007-06-14       Impact factor: 49.962

9.  Calmodulin regulates transglutaminase 2 cross-linking of huntingtin.

Authors:  Gina M Zainelli; Christopher A Ross; Juan C Troncoso; John K Fitzgerald; Nancy A Muma
Journal:  J Neurosci       Date:  2004-02-25       Impact factor: 6.167

10.  Therapeutic targeting of oxygen-sensing prolyl hydroxylases abrogates ATF4-dependent neuronal death and improves outcomes after brain hemorrhage in several rodent models.

Authors:  Saravanan S Karuppagounder; Ishraq Alim; Soah J Khim; Megan W Bourassa; Sama F Sleiman; Roseleen John; Cyrille C Thinnes; Tzu-Lan Yeh; Marina Demetriades; Sandra Neitemeier; Dana Cruz; Irina Gazaryan; David W Killilea; Lewis Morgenstern; Guohua Xi; Richard F Keep; Timothy Schallert; Ryan V Tappero; Jian Zhong; Sunghee Cho; Frederick R Maxfield; Theodore R Holman; Carsten Culmsee; Guo-Hua Fong; Yijing Su; Guo-li Ming; Hongjun Song; John W Cave; Christopher J Schofield; Frederick Colbourne; Giovanni Coppola; Rajiv R Ratan
Journal:  Sci Transl Med       Date:  2016-03-02       Impact factor: 17.956

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  6 in total

1.  Novel Histone Deacetylase Inhibitors for Treating HIV Infection.

Authors:  Ram W Sabnis
Journal:  ACS Med Chem Lett       Date:  2021-07-02       Impact factor: 4.632

2.  Novel Histone Deacetylase 6 Inhibitors for Treating Alzheimer's Disease and Cancer.

Authors:  Ram W Sabnis
Journal:  ACS Med Chem Lett       Date:  2021-07-02       Impact factor: 4.632

Review 3.  Iron Transporters and Ferroptosis in Malignant Brain Tumors.

Authors:  Jingyu Zhao; Yaqi Wang; Lei Tao; Ligong Chen
Journal:  Front Oncol       Date:  2022-04-21       Impact factor: 5.738

Review 4.  Ways into Understanding HIF Inhibition.

Authors:  Tina Schönberger; Joachim Fandrey; Katrin Prost-Fingerle
Journal:  Cancers (Basel)       Date:  2021-01-05       Impact factor: 6.639

5.  Ferroptosis Induction in Multiple Myeloma Cells Triggers DNA Methylation and Histone Modification Changes Associated with Cellular Senescence.

Authors:  Emilie Logie; Bart Van Puyvelde; Bart Cuypers; Anne Schepers; Herald Berghmans; Jelle Verdonck; Kris Laukens; Lode Godderis; Maarten Dhaenens; Dieter Deforce; Wim Vanden Berghe
Journal:  Int J Mol Sci       Date:  2021-11-12       Impact factor: 5.923

6.  Comprehensive analysis of histone deacetylases genes in the prognosis and immune infiltration of glioma patients.

Authors:  Lin Shen; Yanyan Li; Na Li; Liangfang Shen; Zhanzhan Li
Journal:  Aging (Albany NY)       Date:  2022-05-11       Impact factor: 5.955

  6 in total

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