Literature DB >> 33123961

Structure elucidation of small organic molecules by contemporary computational chemistry methods.

Chung Sub Kim1, Joonseok Oh2,3, Tae Hyun Lee4.   

Abstract

Small molecules derived from natural sources such as plants, fungi, bacteria, or synthetic materials have served as promising drug candidates for a long time. Unambiguous determination of chemical structures of these natural/synthetic molecules is a prerequisite for their development into new drugs. Despite the significant development of modern analytical tools it is still challenging to accomplish full structural assignment. In the last decades, computational chemistry methods using quantum mechanics and molecular mechanics theories followed by sophisticated statistical approaches have been rapidly developed. Such in silico platforms have widely and successfully been used to characterize and revise the structures of natural/synthetic products. In this review, we summarize contemporary computational approaches coupled with statistical methods for structure elucidation of small organic molecules. Among these approaches available, we opted for several relevant case studies in which the stereochemistry/structures of natural products were elucidated using these combinatorial methods.

Keywords:  Computational chemistry; Natural products; Nuclear magnetic resonance (NMR); Quantum mechanics (QM); Statistical analysis; Stereochemistry; Structure elucidation

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Year:  2020        PMID: 33123961     DOI: 10.1007/s12272-020-01277-4

Source DB:  PubMed          Journal:  Arch Pharm Res        ISSN: 0253-6269            Impact factor:   4.946


  4 in total

1.  Terpenoids from Glechoma hederacea var. longituba and their biological activities.

Authors:  Dong Hyun Kim; Song Lim Ham; Zahra Khan; Sun Yeou Kim; Sang Un Choi; Chung Sub Kim; Kang Ro Lee
Journal:  Beilstein J Org Chem       Date:  2022-05-17       Impact factor: 2.544

Review 2.  Approaches to Configuration Determinations of Flexible Marine Natural Products: Advances and Prospects.

Authors:  Zong-Qing Huo; Feng Zhu; Xing-Wang Zhang; Xiao Zhang; Hong-Bao Liang; Jing-Chun Yao; Zhong Liu; Gui-Min Zhang; Qing-Qiang Yao; Guo-Fei Qin
Journal:  Mar Drugs       Date:  2022-05-19       Impact factor: 6.085

3.  The DP5 probability, quantification and visualisation of structural uncertainty in single molecules.

Authors:  Alexander Howarth; Jonathan M Goodman
Journal:  Chem Sci       Date:  2022-02-25       Impact factor: 9.825

Review 4.  Recent Achievements in Total Synthesis for Integral Structural Revisions of Marine Natural Products.

Authors:  Min Woo Ha; Jonghoon Kim; Seung-Mann Paek
Journal:  Mar Drugs       Date:  2022-02-25       Impact factor: 5.118

  4 in total

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