Literature DB >> 33123759

Population Structure of Phytophthora infestans from a Single Location in Poland Over a Long Period of Time in Context of Weather Conditions.

M Janiszewska1, S Sobkowiak2, E Stefańczyk2, J Śliwka2.   

Abstract

Phytophthora infestans (Mont.) de Bary is a destructive potato pathogen. Changing weather conditions are among the factors that influence the pathogen population structure. In this study, 237 P. infestans isolates were collected from a single unprotected experimental field in an area with high late-blight pressure located in Boguchwała in the southeastern part of Poland during 15 growing seasons (2000-2014). The isolates were assessed for mating type, mitochondrial haplotype, resistance to metalaxyl, virulence, and polymorphism of 14 single-sequence repeat markers (SSRs). The results revealed 89 unique genotypes among the 237 P. infestans isolates. Eighty-seven isolates belonged to genotype 34_A1, which was detected in all the years of research except 2012. Isolates of P. infestans from individual years were very similar to each other, as shown by Nei's genetic identity based on 14 SSR markers. The obtained results on isolate characteristics were analyzed in terms of meteorological data (air temperature and precipitation) and indicated that frost, long winters, and hot, dry summers did not directly affect the P. infestans population structure. We described the variability in metalaxyl resistance and virulence among isolates of the P. infestans genotype 34_A1.

Entities:  

Keywords:  Late blight; Metalaxyl; Microsatellite markers; Potato; SSR; Solanum tuberosum

Year:  2020        PMID: 33123759      PMCID: PMC7982385          DOI: 10.1007/s00248-020-01630-6

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  25 in total

1.  The population genetics of phytophthora.

Authors:  S B Goodwin
Journal:  Phytopathology       Date:  1997-04       Impact factor: 4.025

2.  The 2009 Late Blight Pandemic in the Eastern United States - Causes and Results.

Authors:  W E Fry; M T McGrath; A Seaman; T A Zitter; A McLeod; G Danies; I M Small; K Myers; K Everts; A J Gevens; B K Gugino; S B Johnson; H Judelson; J Ristaino; P Roberts; G Secor; K Seebold; K Snover-Clift; A Wyenandt; N J Grünwald; C D Smart
Journal:  Plant Dis       Date:  2013-03       Impact factor: 4.438

3.  Can weed hosts increase aggressiveness of Phytophthora infestans on potato?

Authors:  L Grönberg; B Andersson; J Yuen
Journal:  Phytopathology       Date:  2012-04       Impact factor: 4.025

4.  Genetic analysis of Phytophthora infestans populations in the Nordic European countries reveals high genetic variability.

Authors:  May Bente Brurberg; Abdelhameed Elameen; Vinh Hong Le; Ragnhild Naerstad; Arne Hermansen; Ari Lehtinen; Asko Hannukkala; Bent Nielsen; Jens Hansen; Björn Andersson; Jonathan Yuen
Journal:  Fungal Biol       Date:  2011-01-25

5.  Evaluation of late blight foliar resistance of potato cultivars in northern Baltic conditions.

Authors:  Eve Runno-Paurson; Merili Hansen; Katrin Kotkas; Ingrid H Williams; Ülo Niinemets; Ants Einola
Journal:  Zemdirbyste       Date:  2019       Impact factor: 1.083

6.  GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update.

Authors:  Rod Peakall; Peter E Smouse
Journal:  Bioinformatics       Date:  2012-07-20       Impact factor: 6.937

7.  The rise and fall of the Phytophthora infestans lineage that triggered the Irish potato famine.

Authors:  Kentaro Yoshida; Verena J Schuenemann; Liliana M Cano; Marina Pais; Bagdevi Mishra; Rahul Sharma; Chirsta Lanz; Frank N Martin; Sophien Kamoun; Johannes Krause; Marco Thines; Detlef Weigel; Hernán A Burbano
Journal:  Elife       Date:  2013-05-28       Impact factor: 8.140

8.  Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen.

Authors:  David E L Cooke; Liliana M Cano; Sylvain Raffaele; Ruairidh A Bain; Louise R Cooke; Graham J Etherington; Kenneth L Deahl; Rhys A Farrer; Eleanor M Gilroy; Erica M Goss; Niklaus J Grünwald; Ingo Hein; Daniel MacLean; James W McNicol; Eva Randall; Ricardo F Oliva; Mathieu A Pel; David S Shaw; Julie N Squires; Moray C Taylor; Vivianne G A A Vleeshouwers; Paul R J Birch; Alison K Lees; Sophien Kamoun
Journal:  PLoS Pathog       Date:  2012-10-04       Impact factor: 6.823

9.  Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction.

Authors:  Zhian N Kamvar; Javier F Tabima; Niklaus J Grünwald
Journal:  PeerJ       Date:  2014-03-04       Impact factor: 2.984

Review 10.  Five Reasons to Consider Phytophthora infestans a Reemerging Pathogen.

Authors:  W E Fry; P R J Birch; H S Judelson; N J Grünwald; G Danies; K L Everts; A J Gevens; B K Gugino; D A Johnson; S B Johnson; M T McGrath; K L Myers; J B Ristaino; P D Roberts; G Secor; C D Smart
Journal:  Phytopathology       Date:  2015-06-26       Impact factor: 4.025

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  2 in total

1.  Late Blight Resistance Conferred by Rpi-Smira2/R8 in Potato Genotypes In Vitro Depends on the Genetic Background.

Authors:  Eva Blatnik; Marinka Horvat; Sabina Berne; Miha Humar; Peter Dolničar; Vladimir Meglič
Journal:  Plants (Basel)       Date:  2022-05-16

2.  Highly Diverse Phytophthora infestans Populations Infecting Potato Crops in Pskov Region, North-West Russia.

Authors:  Eve Runno-Paurson; Collins A Agho; Nadezda Zoteyeva; Mati Koppel; Merili Hansen; Tiit Hallikma; David E L Cooke; Helina Nassar; Ülo Niinemets
Journal:  J Fungi (Basel)       Date:  2022-04-30
  2 in total

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