| Literature DB >> 33122891 |
Ashraf Atef Hatamleh1, Dunia Al Farraj1, Sarah Salah Al-Saif1, SathishKumar Chidambaram2, Surendrakumar Radhakrishnan2, Idhayadhulla Akbar2.
Abstract
PURPOSE: A new series of tetrazole derivatives, which are renowned antimicrobials possessing a five-membered aromatic heterocyclic group, are synthesized herein and subjected to antimicrobial and cytotoxicity screening.Entities:
Keywords: N-Mannich base; antibacterial; antifungal; cytotoxic; molecular docking; ultrasonication
Mesh:
Substances:
Year: 2020 PMID: 33122891 PMCID: PMC7591006 DOI: 10.2147/DDDT.S270896
Source DB: PubMed Journal: Drug Des Devel Ther ISSN: 1177-8881 Impact factor: 4.162
Figure 1Tetrazole bioactive compounds.
Scheme 1Synthesis of tetrazole derivatives 1a–e, 2a–e, 3a–e, and 4a–e via ultrasonication.
Effect of Various Solvents on the Product Yield of 1a, 2a, 3a, and 4a
| Compounds | Solvent | Ultrasonication | Conventional Method | ||
|---|---|---|---|---|---|
| Time (Min) | Yield (%) | Time (Hrs) | Yield (%) | ||
| 1a | H2O | – | – | – | – |
| MeOH | 6 | 72 | 4 | 40 | |
| H2O–Ethanol | 5 | 79 | 4 | 47 | |
| EtOH | 3 | 96 | 2 | 66 | |
| 2a | H2O | – | – | ||
| MeOH | 12 | 58 | 5 | 22 | |
| H2O–Ethanol | 10 | 66 | 4 | 35 | |
| EtOH | 6 | 78 | 3 | 65 | |
| 3a | H2O | – | – | – | – |
| MeOH | 18 | 69 | 5 | 28 | |
| H2O–Ethanol | 15 | 73 | 4 | 39 | |
| EtOH | 7 | 88 | 2 | 76 | |
| 4a | H2O | – | – | – | – |
| MeOH | 12 | 58 | 2 | 34 | |
| H2O–Ethanol | 10 | 76 | 3 | 48 | |
| EtOH | 8 | 81 | 3 | 56 | |
Effect of Using Ethanol as the Solvent on the Product Yield
| Entry | Ultrasonication | Conventional Method | ||
|---|---|---|---|---|
| Time (Min) | Yield (%) | Time (Hrs) | Yield (%) | |
| 1b | 4 | 80 | 2 | 55 |
| 1c | 4 | 83 | 3 | 63 |
| 1d | 4 | 89 | 2 | 52 |
| 1e | 5 | 76 | 3 | 60 |
| 2b | 3 | 79 | 2 | 55 |
| 2c | 5 | 88 | 2 | 59 |
| 2d | 4 | 83 | 2 | 60 |
| 2e | 3 | 89 | 2 | 63 |
| 3b | 5 | 80 | 2 | 68 |
| 3c | 4 | 84 | 2 | 66 |
| 3d | 4 | 86 | 2 | 68 |
| 3e | 3 | 89 | 2 | 63 |
| 4b | 3 | 86 | 3 | 59 |
| 4c | 4 | 88 | 2 | 58 |
| 4d | 3 | 79 | 2 | 69 |
| 4e | 4 | 81 | 3 | 72 |
Antibacterial Effects Measured by the Zone of Inhibition (Mm)
| Compound | Concentration 100 µg/mL | ||||
|---|---|---|---|---|---|
| 1a | 10 | 12 | – | – | 14 |
| 1b | 12 | 19 | 22 | 16 | 18 |
| 1c | 20 | 10 | 17 | 10 | 08 |
| 1d | 12 | 09 | 13 | 15 | 11 |
| 1e | 15 | – | 12 | 14 | 08 |
| 2a | 14 | 17 | 10 | 10 | 16 |
| 2b | 17 | 22 | 10 | 12 | 18 |
| 2c | 10 | 13 | 10 | 19 | 10 |
| 2d | 12 | 15 | 14 | 11 | 09 |
| 2e | 10 | 11 | 13 | 12 | 11 |
| 3a | 09 | 16 | 11 | 10 | 10 |
| 3b | 13 | 10 | 12 | 09 | – |
| 3c | 15 | – | 13 | – | 11 |
| 3d | 14 | 12 | – | 12 | 10 |
| 3e | 08 | 08 | 11 | 10 | 13 |
| 4a | 11 | – | 10 | 15 | 09 |
| 4b | 10 | 08 | 06 | 12 | 07 |
| 4c | 08 | 15 | – | 16 | – |
| 4d | 16 | 12 | 11 | 10 | 09 |
| 4e | 12 | 18 | 13 | 21 | 10 |
| Cefazolin | 30 | 20 | 10 | 12 | 10 |
Antifungal Effects Measured by Zone of Inhibition (Mm)
| Compound | Concentration 100 µg/mL | |||
|---|---|---|---|---|
| 1a | 12 | 10 | – | – |
| 1b | 18 | 26 | 16 | 10 |
| 1c | 15 | 10 | – | 12 |
| 1d | – | – | 12 | 15 |
| 1e | 12 | 10 | 10 | 28 |
| 2a | – | 16 | – | – |
| 2b | 15 | 12 | 16 | 12 |
| 2c | 13 | 11 | 12 | 11 |
| 2d | 10 | 09 | 10 | 15 |
| 2e | 19 | 13 | 11 | 11 |
| 3a | 17 | 10 | 09 | 10 |
| 3b | – | 07 | 10 | 16 |
| 3c | 12 | 11 | – | 09 |
| 3d | 11 | 15 | 11 | – |
| 3e | 14 | 11 | 13 | 15 |
| 4a | 12 | – | 10 | 12 |
| 4b | 11 | 14 | 11 | – |
| 4c | 08 | 09 | 13 | – |
| 4d | 14 | 05 | 09 | 13 |
| 4e | 10 | 13 | – | 09 |
| Clotrimazole | 22 | 24 | 25 | 26 |
The Minimal Inhibitory Concentrations (MIC; µg/mL) of 1a – e, 2a – e, 3a – e, and 4a –e
| Compound | Antibacterial Activity | Antifungal Activity | |||||||
|---|---|---|---|---|---|---|---|---|---|
| 1a | 64 | 64 | >100 | >100 | 32 | 64 | 64 | >100 | >100 |
| 1b | 64 | 8 | 8 | 32 | 4 | 8 | 0.25 | 32 | >100 |
| 1c | 4 | 32 | 16 | 64 | >100 | >100 | >100 | >100 | 64 |
| 1d | 64 | >100 | 64 | 32 | >100 | >100 | >100 | 64 | 32 |
| 1e | >100 | >100 | >100 | 64 | >100 | 64 | >100 | >100 | 1 |
| 2a | 64 | 64 | >100 | 64 | 8 | >100 | 32 | >100 | >100 |
| 2b | 32 | 8 | >100 | 64 | 4 | 32 | 64 | 32 | 64 |
| 2c | >100 | 64 | >100 | 32 | >100 | 64 | >100 | >100 | >100 |
| 2d | >100 | 64 | >100 | >100 | >100 | >100 | >100 | >100 | 64 |
| 2e | >100 | >100 | >100 | >100 | >100 | 16 | >100 | >100 | >100 |
| 3a | >100 | 64 | >100 | >100 | >100 | 32 | >100 | >100 | >100 |
| 3b | >100 | >100 | >100 | >100 | >100 | >100 | >100 | >100 | 64 |
| 3c | 32 | >100 | 16 | >100 | >100 | >100 | >100 | >100 | >100 |
| 3d | 64 | >100 | >100 | >100 | >100 | >100 | 32 | >100 | >100 |
| 3e | >100 | >100 | >100 | >100 | >100 | 64 | >100 | 64 | 64 |
| 4a | >100 | >100 | >100 | >100 | >100 | >100 | >100 | >100 | >100 |
| 4b | >100 | >100 | >100 | >100 | >100 | >100 | 64 | >100 | >100 |
| 4c | >100 | 64 | >100 | 64 | >100 | >100 | >100 | 64 | 64 |
| 4d | 64 | >100 | >100 | >100 | >100 | 64 | >100 | >100 | 64 |
| 4e | >100 | 64 | 16 | 32 | 64 | 64 | 64 | >100 | >100 |
| Cefazolin | 0.12 | 32 | >100 | 64 | > 100 | – | – | – | – |
| /Clotrimazole | – | – | – | – | – | 1 | 0.5 | 4 | 2 |
Cytotoxic Effects of 1a – e, 2a – e, 3a – e, and 4a – e
| Compounds | HepG2 | MCF-7 | HeLa | ||||||
|---|---|---|---|---|---|---|---|---|---|
| GI50 | TGI | LC50 | GI50 | TGI | LC50 | GI50 | TGI | LC50 | |
| 1a | 16.2 | 29.1 | >100 | 22.9 | 46.8 | >100 | 21.6 | 49.4 | 81.2 |
| 1b | 23.3 | 54.8 | 81.2 | 20.1 | 45.1 | >100 | 41.0 | 87.2 | >100 |
| 1c | 18.2 | 58.1 | 90.1 | 8.2 | 16.1 | 57.2 | 20.2 | 48.1 | 84.1 |
| 1d | 32.9 | 61.6 | >100 | 25.9 | 57.4 | 90.8 | 22.9 | 52.5 | 87.9 |
| 1e | 35.9 | 63.9 | >100 | 21.9 | 47.6 | 87.0 | 39.8 | 61.0 | >100 |
| 2a | 6.3 | 15.3 | 51.2 | 5.2 | 20.1 | >100 | 8.1 | 17.1 | 65.3 |
| 2b | 5.4 | 12.5 | 62.5 | 13.5 | 26.9 | 83.5 | 16.8 | 34.7 | 92.8 |
| 2c | 31.7 | 62.1 | >100 | 22.6 | 52.5 | 88.4 | 29.8 | 52.6 | >100 |
| 2d | 37.9 | 57.9 | 92.9 | 40.7 | 67.9 | >100 | 19.7 | 43.2 | 86.9 |
| 2e | 34.8 | 65.8 | >100 | 46.2 | 66.4 | >100 | 43.8 | 72.4 | >100 |
| 3a | 51.0 | 72.1 | 91.8 | 34.9 | 64.9 | 95.7 | 51.7 | 78.9 | >100 |
| 3b | 61.6 | 84.8 | >100 | 41.6 | 65.0 | 93.8 | 42.8 | 61.0 | 93.5 |
| 3c | 18.6 | 30.3 | 81.9 | 21.7 | 44.8 | 64.9 | 27.9 | 41.0 | 86.9 |
| 3d | 47.9 | 64.8 | >100 | 41.8 | 63.8 | >100 | 42.8 | 64.9 | >100 |
| 3e | 45.9 | 61.9 | >100 | 27.6 | 58.9 | >100 | 38.9 | 61.9 | >100 |
| 4a | 46.7 | 61.0 | >100 | 28.3 | 50.2 | >100 | 43.3 | 66.0 | >100 |
| 4b | 64.2 | 76.8 | >100 | 35.6 | 59.3 | 92.3 | 53.2 | 62.0 | >100 |
| 4c | 56.0 | 78.6 | 92.0 | 39.3 | 45.2 | 39.0 | 45.3 | 69.2 | 92.0 |
| 4d | 46.3 | 63.0 | 95.0 | 55.0 | 65.0 | 42.3 | 52.0 | 66.3 | 93.0 |
| 4e | 52.3 | 66.0 | >100 | 40.2 | 61.3 | 90.2 | 43.0 | 64.5 | 85.3 |
| Fluorouracil | 43.2 | 62.3 | >100 | 2.5 | 12.9 | 45.0 | 0.3 | 3.6 | 11.5 |
Figure 2Structure–activity relationship.
Figure 3Molecular docking of compound 2b binding site of 4OR7. (A) Docked complex. (B) Molecular surface. (C) 3D. (D) 2D.
Figure 4Molecular docking of cefazolin binding site of 4OR7. (A) Docked complex. (B) Molecular surface. (C) 3D. (D) 2D.
Figure 5Molecular docking of compound 1b binding site of 1AI9. (A) Docked complex. (B) Molecular surface. (C) 3D. (D) 2D.
Figure 6Molecular docking of clotrimazole binding site of 1AI9. (A) Docked complex. (B) Molecular surface. (C) 3D. (D) 2D.
Figure 7Molecular docking of compound 2a binding site of 4FM9. (A) Docked complex. (B) Molecular surface. (C) 3D. (D) 2D.
Figure 8Molecular docking of fluorouracil binding site of 4FM9. (A) Docked complex. (B) Molecular surface. (C) 3D. (D) 2D.
Molecular Docking Interactions of 2b, 1b, and 2a with 4OR7, 1AI9, and 4FM9
| Proteins | Compound | Binding Affinity (kcal/mol) | No. of H Bonds | H Bonding Residues |
|---|---|---|---|---|
| 4OR7 | 2b | −7.8 | 2 | Thr46 |
| Cefazolin | −7.2 | 6 | Arg44, Leu45 | |
| 1AI9 | 1b | −6.5 | 5 | Ala111, Ile112, Tyr118 |
| Clotrimazole | −6.8 | – | – | |
| 4FM9 | 2a | −7.1 | – | – |
| Fluorouracil | −5.4 | 3 | Gln542, Tyr590, Leu685 |