| Literature DB >> 33121054 |
Elmer Jeto Gomes Ataide1,2, Nikhila Ponugoti2, Alfredo Illanes2, Simone Schenke1, Michael Kreissl1, Michael Friebe2,3.
Abstract
The classification of thyroid nodules using ultrasound (US) imaging is done using the Thyroid Imaging Reporting and Data System (TIRADS) guidelines that classify nodules based on visual and textural characteristics. These are composition, shape, size, echogenicity, calcifications, margins, and vascularity. This work aims to reduce subjectivity in the current diagnostic process by using geometric and morphological (G-M) features that represent the visual characteristics of thyroid nodules to provide physicians with decision support. A total of 27 G-M features were extracted from images obtained from an open-access US thyroid nodule image database. 11 significant features in accordance with TIRADS were selected from this global feature set. Each feature was labeled (0 = benign and 1 = malignant) and the performance of the selected features was evaluated using machine learning (ML). G-M features together with ML resulted in the classification of thyroid nodules with a high accuracy, sensitivity and specificity. The results obtained here were compared against state-of the-art methods and perform significantly well in comparison. Furthermore, this method can act as a computer aided diagnostic (CAD) system for physicians by providing them with a validation of the TIRADS visual characteristics used for the classification of thyroid nodules in US images.Entities:
Keywords: TIRADS; classification; computer aided diagnosis; feature extraction; machine learning; thyroid nodules; ultrasound imaging
Mesh:
Year: 2020 PMID: 33121054 PMCID: PMC7663034 DOI: 10.3390/s20216110
Source DB: PubMed Journal: Sensors (Basel) ISSN: 1424-8220 Impact factor: 3.576
Figure 1Workflow diagram.
Figure 2Examples of ultrasound images of thyroid nodules (a1) malignant nodule, (a2) its ground truth, (b1) benign nodule and (b2) its ground truth [19].
Overview of 27 extracted geometric and morphological (G-M) features.
| Sr. No. | Features | Type |
|---|---|---|
| 1 | Convex Hull |
|
| 2 | Convexity | |
| 3 | Solidity | |
| 4 | Elongation | |
| 5 | Compactness | |
| 6 | Rectangularity | |
| 7 | Orientation | |
| 8 | Roundness | |
| 9 | Major Axis Length | |
| 10 | Minor Axis Length | |
| 11 | Eccentricity | |
| 12 | Circular Variance | |
| 13 | Elliptic Variance | |
| 14 | Ratio of Major Axis Length to Minor Axis Length | |
| 15 | Bounding Box | |
| 16 | Centroid | |
| 17 | Convex Area | |
| 18 | Filled Area | |
| 19 | Convex Perimeter | |
| 20 | Area |
|
| 21 | Perimeter | |
| 22 | Aspect Ratio | |
| 23 | Area Perimeter (AP)Ratio | |
| 24 | Object Perimeter to Ellipse Perimeter (TEP) Ratio | |
| 25 | TEP Difference | |
| 26 | Object Perimeter to Circular Perimeter (TCP) Ratio | |
| 27 | TCP Difference |
Figure 3Visual depiction of geometric and morphological features. (a) Convexity, (b) elongation, (c) major and minor axes, (d) bounding box, (e1,e2) different instances of eccentricity, (f) orientation, (g) filled area, (h) convex area, (i) circular variance and (j) elliptical variance.
Performance metrics of selected features versus global and discounted features.
| Method | Accuracy (%) | Sensitivity (%) | Specificity (%) |
|---|---|---|---|
| Global | 70.18 | 48.07 | 92.29 |
| Discounted | 61.55 | 31.65 | 91.45 |
| G-M | 99.33 | 99.39 | 99.25 |
Selected random forest classifier (RFC) parameters.
| Parameter | Value |
|---|---|
| Number of Decision Trees | 400 |
| Criterion | Entropy |
| Bootstrap | True |
Eleven most significant features selected from the global feature list of 27.
| Sr. No. | Features | Type |
|---|---|---|
| 1 | Solidity |
|
| 2 | Orientation | |
| 3 | Roundness | |
| 4 | Major Axis Length | |
| 5 | Minor Axis Length | |
| 6 | Bounding Box | |
| 7 | Convex Area | |
| 8 | Area |
|
| 9 | Perimeter | |
| 10 | Aspect Ratio | |
| 11 | AP Ratio |
Feature evaluation using RFC compared to the performance of the related approaches using the same dataset.
| Method | Accuracy (%) | Sensitivity (%) | Specificity (%) |
|---|---|---|---|
| MBCNN [ | 96.13 | 97.18 | - |
| FDCNN [ | 98.29 | 99.10 | 93.90 |
| LBPV (SVM) [ | 94.5 | 97.25 | 94.50 |
| G-M (RFC) | 99.33 | 99.39 | 99.25 |
Feature evaluation using RFC compared to the performance of shape-based features found in related studies using different datasets.
| Method | Accuracy (%) | Sensitivity (%) | Specificity (%) |
|---|---|---|---|
| Margin Features [ | 91.52 | 91.80 | 91.35 |
| Margin Features [ | 92.30 | 91.88 | 92.73 |
| G-M | 99.33 | 99.39 | 99.25 |