Literature DB >> 33112224

Tabrizicola oligotrophica sp. nov. and Rhodobacter tardus sp. nov., two new species of bacteria belonging to the family Rhodobacteraceae.

Ceshing Sheu1, Zhi-Hao Li2, Shih-Yi Sheu3, Che-Chia Yang3, Wen-Ming Chen2.   

Abstract

Two Gram-stain-negative, aerobic, non-motile bacteria, designated KMS-5T and CYK-10T, were isolated from freshwater environments. 16S rRNA gene sequence similarity results indicated that these two novel strains belong to the family Rhodobacteraceae. Strain KMS-5T is closely related to species within the genus Tabrizicola (96.1-96.8 % sequence similarity) and Cypionkella (96.5-97.0 %). Strain CYK-10T is closest to Rhodobacter thermarum YIM 73036T with 96.6 % sequence similarity. Phylogenetic analyses based on 16S rRNA gene sequences and an up-to-date bacterial core gene set showed that strain KMS-5T is affiliated with species in the genus Tabrizicola and strain CYK-10T is placed in a distinct clade with Rhodobacter blasticus ATCC 33485T, Rhodobacter thermarum YIM 73036T and Rhodobacter flagellatus SYSU G03088T. These two strains shared common chemotaxonomic features comprising Q-10 as the major quinone, phosphatidylethanolamine, phosphatidylglycerol and phosphatidylcholine as the principal polar lipids, and C18 : 1  ω7c as the main fatty acid. The average nucleotide identity, average amino acid identity and digital DNA-DNA hybridization values between these two novel isolates and their closest relatives were below the cut-off values of 95-96, 90 and 70 %, respectively, used for species demarcation. The obtained polyphasic taxonomic data suggested that strain KMS-5T represents a novel species within the genus Tabrizicola, for which the name Tabrizicola oligotrophica sp. nov. is proposed with KMS-5T (=BCRC 81196T=LMG 31337T) as the type strain, and strain CYK-10T should represent a novel species of the genus Rhodobacter, for which the name Rhodobacter tardus sp. nov. is proposed with CYK-10T (=BCRC 81191T=LMG 31336T) as the type strain.

Entities:  

Keywords:  Alphaproteobacteria; Rhodobacter tardus sp. nov.; Rhodobacteraceae; Rhodobacterales; Tabrizicola oligotrophica sp. nov.; polyphasic taxonomy

Year:  2020        PMID: 33112224     DOI: 10.1099/ijsem.0.004526

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

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Journal:  Antonie Van Leeuwenhoek       Date:  2022-04-05       Impact factor: 2.271

2.  Reclassification of 11 Members of the Family Rhodobacteraceae at Genus and Species Levels and Proposal of Pseudogemmobacter hezensis sp. nov.

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Journal:  Front Microbiol       Date:  2022-04-13       Impact factor: 6.064

3.  Diversity of Aerobic Anoxygenic Phototrophs and Rhodopsin-Containing Bacteria in the Surface Microlayer, Water Column and Epilithic Biofilms of Lake Baikal.

Authors:  Agnia Dmitrievna Galachyants; Andrey Yurjevich Krasnopeev; Galina Vladimirovna Podlesnaya; Sergey Anatoljevich Potapov; Elena Viktorovna Sukhanova; Irina Vasiljevna Tikhonova; Ekaterina Andreevna Zimens; Marsel Rasimovich Kabilov; Natalia Albertovna Zhuchenko; Anna Sergeevna Gorshkova; Maria Yurjevna Suslova; Olga Ivanovna Belykh
Journal:  Microorganisms       Date:  2021-04-14

4.  Genome Sequence and Characterization of a Xanthorhodopsin-Containing, Aerobic Anoxygenic Phototrophic Rhodobacter Species, Isolated from Mesophilic Conditions at Yellowstone National Park.

Authors:  John A Kyndt; Sydney Robertson; Isabella B Shoffstall; Robert F Ramaley; Terrance E Meyer
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  4 in total

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