Literature DB >> 33106671

Spike mutation D614G alters SARS-CoV-2 fitness.

Jessica A Plante1,2,3, Yang Liu4, Jianying Liu2,3, Hongjie Xia4, Bryan A Johnson2, Kumari G Lokugamage3, Xianwen Zhang4, Antonio E Muruato2,3, Jing Zou4, Camila R Fontes-Garfias4, Divya Mirchandani1,2,3, Dionna Scharton1,2,3, John P Bilello5, Zhiqiang Ku6, Zhiqiang An6, Birte Kalveram7, Alexander N Freiberg2,7,8,9, Vineet D Menachery2,3, Xuping Xie10, Kenneth S Plante11,12,13, Scott C Weaver14,15,16,17,18,19,20, Pei-Yong Shi21,22,23,24,25,26.   

Abstract

The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike protein substitution D614G became dominant during the coronavirus disease 2019 (COVID-19) pandemic1,2. However, the effect of this variant on viral spread and vaccine efficacy remains to be defined. Here we engineered the spike D614G substitution in the USA-WA1/2020 SARS-CoV-2 strain, and found that it enhances viral replication in human lung epithelial cells and primary human airway tissues by increasing the infectivity and stability of virions. Hamsters infected with SARS-CoV-2 expressing spike(D614G) (G614 virus) produced higher infectious titres in nasal washes and the trachea, but not in the lungs, supporting clinical evidence showing that the mutation enhances viral loads in the upper respiratory tract of COVID-19 patients and may increase transmission. Sera from hamsters infected with D614 virus exhibit modestly higher neutralization titres against G614 virus than against D614 virus, suggesting that the mutation is unlikely to reduce the ability of vaccines in clinical trials to protect against COVID-19, and that therapeutic antibodies should be tested against the circulating G614 virus. Together with clinical findings, our work underscores the importance of this variant in viral spread and its implications for vaccine efficacy and antibody therapy.

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Year:  2020        PMID: 33106671     DOI: 10.1038/s41586-020-2895-3

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  577 in total

1.  Whole genome analysis of more than 10 000 SARS-CoV-2 virus unveils global genetic diversity and target region of NSP6.

Authors:  Indrajit Saha; Nimisha Ghosh; Ayan Pradhan; Nikhil Sharma; Debasree Maity; Kaushik Mitra
Journal:  Brief Bioinform       Date:  2021-03-22       Impact factor: 11.622

2.  Could new COVID variants undermine vaccines? Labs scramble to find out.

Authors:  Ewen Callaway
Journal:  Nature       Date:  2021-01       Impact factor: 49.962

3.  Genetic Characteristics and Phylogeny of 969-bp S Gene Sequence of SARS-CoV-2 from Hawai'i Reveals the Worldwide Emerging P681H Mutation.

Authors:  David P Maison; Lauren L Ching; Cecilia M Shikuma; Vivek R Nerurkar
Journal:  Hawaii J Health Soc Welf       Date:  2021-03-01

4.  Monitoring of SARS-CoV-2 infection in mustelids.

Authors:  Anette Boklund; Christian Gortázar; Paolo Pasquali; Helen Roberts; Søren Saxmose Nielsen; Karl Stahl; Arjan Stegeman; Francesca Baldinelli; Alessandro Broglia; Yves Van Der Stede; Cornelia Adlhoch; Erik Alm; Angeliki Melidou; Grazina Mirinaviciute
Journal:  EFSA J       Date:  2021-03-03

5.  Fundamental evolution of all Orthocoronavirinae including three deadly lineages descendent from Chiroptera-hosted coronaviruses: SARS-CoV, MERS-CoV and SARS-CoV-2.

Authors:  Denis Jacob Machado; Rachel Scott; Sayal Guirales; Daniel A Janies
Journal:  Cladistics       Date:  2021-04-26       Impact factor: 5.254

6.  COVIDOUTCOME-estimating COVID severity based on mutation signatures in the SARS-CoV-2 genome.

Authors:  Ádám Nagy; Balázs Ligeti; János Szebeni; Sándor Pongor; Balázs Gyrffy
Journal:  Database (Oxford)       Date:  2021-05-08       Impact factor: 3.451

7.  Evolution and Epidemiology of SARS-CoV-2 Virus.

Authors:  Yu-Nong Gong; Kuo-Ming Lee; Shin-Ru Shih
Journal:  Methods Mol Biol       Date:  2022

8.  Genomic epidemiology of SARS-CoV-2 in Esteio, Rio Grande do Sul, Brazil.

Authors:  Vinícius Bonetti Franceschi; Gabriel Dickin Caldana; Amanda de Menezes Mayer; Gabriela Bettella Cybis; Carla Andretta Moreira Neves; Patrícia Aline Gröhs Ferrareze; Meriane Demoliner; Paula Rodrigues de Almeida; Juliana Schons Gularte; Alana Witt Hansen; Matheus Nunes Weber; Juliane Deise Fleck; Ricardo Ariel Zimerman; Lívia Kmetzsch; Fernando Rosado Spilki; Claudia Elizabeth Thompson
Journal:  BMC Genomics       Date:  2021-05-20       Impact factor: 3.969

Review 9.  Making sense of spike D614G in SARS-CoV-2 transmission.

Authors:  Aria C Shi; Xuping Xie
Journal:  Sci China Life Sci       Date:  2021-02-04       Impact factor: 6.038

10.  SARS-CoV-2 mRNA vaccines induce persistent human germinal centre responses.

Authors:  Jackson S Turner; Jane A O'Halloran; Elizaveta Kalaidina; Wooseob Kim; Aaron J Schmitz; Julian Q Zhou; Tingting Lei; Mahima Thapa; Rita E Chen; James Brett Case; Fatima Amanat; Adriana M Rauseo; Alem Haile; Xuping Xie; Michael K Klebert; Teresa Suessen; William D Middleton; Pei-Yong Shi; Florian Krammer; Sharlene A Teefey; Michael S Diamond; Rachel M Presti; Ali H Ellebedy
Journal:  Nature       Date:  2021-06-28       Impact factor: 49.962

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