| Literature DB >> 33103544 |
Mingmei Xiong1, Meihua Guo2, Dongjian Huang1, Jing Li1, Yan Zhou1.
Abstract
COPD is a common chronic disease with genetic predisposition. TRPV1 is mainly expressed in peripheral neuron which widely exists in entire respiratory tract. In present study, we aimed to study the relationship between single nucleotide polymorphisms (SNPs) of transient receptor potential vanilloid-1 (TRPV1) and the risk of chronic obstructive pulmonary disease (COPD) or COPD combined with pulmonary hypertension (PH) in Chinese Han population. A total of 1019 individuals, including 506 healthy volunteers and 513 COPD patients (150 patients combined with PH among them) were recruited in this study. Genomic DNA were extracted and sequenced. Genotype and allele frequencies of the TRPV1 SNPs among COPD, COPD combined with PH and control groups were compared. Then, the association of TRPV1 SNPs and smoking status were analyzed. Genotype frequencies of SNP rs3744683 had a significant difference in COPD patients with PH patients compared with control (p = 0.006) or COPD patients without PH patients (p = 0.016). Likewise, SNP rs3744683 was remarkedly associated with the risk of COPD (p = 0.004) in current-smoker groups which phenomenon was not observed in nonsmoker or former-smoker groups. Compared with the control group, there was a significant difference for the distribution of SNP rs4790521 alleles in the COPD group (p = 0.041). For further, logical regression analysis showed that SNP rs3744683 genotype of "TC" was a protective factor for PH in COPD patients compared with the genotype of "TT" (OR = 0.364, 95%CI = 0.159-0.829, p = 0.016). Our findings firstly revealed the relevance between TRPV1 SNPs and the risk for COPD/COPD combined with PH.Entities:
Keywords: COPD; pulmonary hypertension; single nucleotide polymorphism (SNP); transient receptor potential vanilloid-1 (TRPV1)
Mesh:
Substances:
Year: 2020 PMID: 33103544 PMCID: PMC7714492 DOI: 10.1080/15384101.2020.1831246
Source DB: PubMed Journal: Cell Cycle ISSN: 1551-4005 Impact factor: 4.534
General and clinical information of the population recruited in the study
| Characteristics | Control | COPD | |
|---|---|---|---|
| Without PH | With PH | ||
| Case number | 506 | 363 | 150 |
| Gender (male/female) | 414/92 | 306/57 | 126/24 |
| Age (years) | 56.49 ± 9.43 | 67.19 ± 10.60 | 70.03 ± 12.37 |
| Smoking (no/yes) | 121/385 | 91/271 | 35/116 |
| Smoking index (pack-year) | 38.97 ± 25.18 | 42.68 ± 27.9 | 44.16 ± 26.67 |
| BMI (kg/m2) | 24.18 ± 2.48 | 23.57 ± 2.69 | 24.16 ± 2.27 |
| FEV1% (predicted) | 95.77 ± 12.98 | 37.23 ± 18.64 | 35.67 ± 16.10 |
| FEV1/FVC % | 0.81 ± 0.96 | 0.45 ± 0.26 | 0.43 ± 0.15 |
| PASP (mmHg) | 25.37 ± 5.73 | 49.64 ± 14.25 | |
Notes: # p < 0.05 represents significant difference, compared with control. * p < 0.05 represents significant difference, compared with COPD without PH.
Abbreviations: BMI, body mass index; COPD, Chronic obstructive pulmonary disease; FEV1,
forced expiratory volume in one second; FVC, forced vital capacity; PASP, pulmonary artery systolic pressure; PH, pulmonary hypertension.
Genotype and allele frequencies of the SNPs in different population groups
| SNPs | Genotypes | Control (n = 506) | COPD (n = 513) | COPD with PH (n = 150) | ||
|---|---|---|---|---|---|---|
| rs465563 | G/G | 43 (8.5) | 47 (9.11) | 0.854 | 13 (8.67) | 0.91 |
| A/A | 242 (47.83) | 245 (47.48) | 73 (48.67) | |||
| G/A | 209 (41.3) | 202 (39.15) | 58 (38.67) | |||
| G:A | 295:693 | 296:692 | 1 | 84:204 | 0.879 | |
| rs3744683 | T/T | 438 (86.56) | 454 (87.98) | 0.118 | 141 (94) | 0.006 |
| C/C | 0 | 2 (0.39) | 1 (0.67) | |||
| T/C | 67 (13.24) | 50 (9.69) | 7 (4.67) | |||
| T:C | 943:67 | 958:54 | 0.256 | 289:9 | 0.028 | |
| rs224495 | G/G | 313 (61.86) | 305 (59.11) | 0.704 | 85 (56.67) | 0.297 |
| A/A | 18 (3.56) | 22 (3.93) | 9 (6) | |||
| G/A | 172 (33.99) | 179 (34.69) | 55 (36.67) | |||
| G:A | 798:208 | 789:223 | 0.49 | 225:73 | 0.184 | |
| rs4790521 | T/T | 293 (57.91) | 270 (52.33) | 0.11 | 80 (53.33) | 0.353 |
| C/C | 21 (4.15) | 31 (6) | 10 (6.67) | |||
| T/C | 160 (31.62) | 184 (35.66) | 50 (33.33) | |||
| T:C | 746:202 | 724:246 | 0.041 | 210:70 | 0.221 |
Notes: a P-value were calculated by χ2 test, COPD group compared with control. b P-value were calculated by χ2 test, COPD combined with PH group compared with control. The ratio of alleles(A:B) were calculated as: AB+2*AA: AB+2*BB.
Abbreviations: SNP, single nucleotide polymorphism; COPD, Chronic obstructive pulmonary disease; PH, pulmonary hypertension.
Analysis of the association between genotypes of TRPV1 SNP rs3744683 and rs4790521 and the COPD risk
| SNPs | Model | Genotypes | Control (n = 506) | COPD (n = 513) | Without adjustment | With adjustment | ||
|---|---|---|---|---|---|---|---|---|
| OR (95% CI) | OR (95% CI) | |||||||
| rs3744683 | Codominant | TT | 438 (86.56) | 454 (87.98) | 1 | 1 | ||
| TC | 67 (13.24) | 50 (9.69) | 0.72 (0.488–1.062) | 0.118 | 0.787(0.51–1.214) | 0.278 | ||
| CC | 0 | 2 (0.39) | 4.82 (0.231–100.8) | 0.5 | - | - | ||
| Dominant | TT | 438 (86.56) | 454 (87.98) | 1 | 1 | |||
| TC-CC | 67 (13.24) | 52 (10.08) | 0.749 (0.509–1.1) | 0.141 | 0.841(0.547–1.292) | 0.429 | ||
| Recessive | CC | 0 | 2 (0.39) | 1 | ||||
| TC-TT | 505 (99.8) | 504 (97.67) | 5 (0.24–104.6) | 0.5 | - | - | ||
| Over-dominant | TT-CC | 438 (86.56) | 456 (88.37) | 1 | 1 | |||
| TC | 67 (13.24) | 50 (9.69) | 0.717 (0.486–1.06) | 0.093 | 0.78(0.506–1.203) | 0.26 | ||
| rs4790521 | Codominant | CC | 21 (4.15) | 31 (6) | 1 | 1 | ||
| TC | 160 (31.62) | 184 (35.66) | 0.779 (0.431–1.41) | 0.409 | 0.841(0.437–1.616) | 0.603 | ||
| TT | 293 (57.91) | 270 (52.33) | 0.624 (0.35–1.113) | 0.11 | 0.715(0.378–1.352) | 0.301 | ||
| Dominant | CC | 21 (4.15) | 31 (6) | 1 | 1 | |||
| TC-TT | 453 (89.53) | 454 (87.98) | 0.679 (0.384–1.2) | 0.182 | 0.76(0.406–1.423) | 0.392 | ||
| Recessive | TT | 293 (57.91) | 270 (52.33) | 1 | 1 | |||
| TC-CC | 181 (35.77) | 215 (41.67) | 1.289 (1–1.668) | 0.062 | 1.203(0.945–1.6) | 0.204 | ||
| Over-dominant | TT-CC | 314 (62.06) | 301 (58.33) | 1 | 1 | |||
| TC | 160 (31.62) | 184 (35.66) | 1.2 (0.921–1.563) | 0.179 | 1.144(0.853–1.532) | 0.369 | ||
Notes: p < 0.05 represents significant difference. a P-value were analyzed by χ2 test or Fisher’s exact tests. b P-value were analyzed by logical regression adjusted for age and smoking status. p < 0.05 represents significant difference.
Abbreviations: SNP, single nucleotide polymorphism; COPD, Chronic obstructive pulmonary disease; CI, confidence interval; OR, odds ratio.
Analysis of the association between genotypes of TRPV1 SNP rs3744683 and rs4790521 and the risk of COPD combined with PH
| SNPs | Model | Genotypes | COPD without PH (n = 363) | COPD with PH (n = 150) | Without adjustment | With adjustment | ||
|---|---|---|---|---|---|---|---|---|
| OR (95% CI) | OR (95% CI) | |||||||
| rs3744683 | Codominant | TT | 313 (90.9) | 141 (94) | 1 | 1 | ||
| TC | 43 (11.85) | 7 (4.67) | 0.37 (0.162–0.844) | 0.033 | 0.364 (0.159–0.829) | 0.016 | ||
| CC | 1 (0.28) | 1 (0.67) | 2.22 (0.138–35.745) | 0.574 | 3.255 (0.196–54.041) | 0.41 | ||
| Dominant | TT | 313 (90.9) | 141 (94) | 1 | 1 | |||
| TC-CC | 44 (12.12) | 8 (5.33) | 0.404 (0.185–0.88) | 0.029 | 0.411 (0.188–0.897) | 0.026 | ||
| Recessive | CC | 1 (0.28) | 1 (0.67) | 1 | 1 | |||
| TC-TT | 356 (98.07) | 148 (98.67) | 0.416 (0.026–6.691) | 0.503 | 0.282 (0.017–4.484) | 0.378 | ||
| Over-dominant | TT-CC | 314 (86.5) | 142 (94.67) | 1 | 1 | |||
| TC | 43 (11.85) | 7 (4.67) | 0.36 (0.158–0.82) | 0.018 | 0.362 (0.159–0.825) | 0.016 | ||
| rs4790521 | Codominant | CC | 21 (5.79) | 10 (6.67) | 1 | |||
| TC | 134 (36.91) | 51 (34) | 0.784 (0.345–1.779) | 0.56 | 0.814 (0.357–1.852) | 0.623 | ||
| TT | 190 (52.34) | 80 (53.33) | 0.884 (0.399–1.962) | 0.765 | 0.923 (0.415–2.054) | 0.844 | ||
| Dominant | CC | 21 (5.79) | 10 (6.67) | 1 | 1 | |||
| TC-TT | 324 (89.26) | 131 (87.33) | 0.843 (0.386–1.838) | 0.67 | 0.877 (0.401–1.919) | 0.743 | ||
| Recessive | TT | 190 (52.34) | 80 (53.33) | 1 | 1 | |||
| TC-CC | 155 (42.7) | 61 (40.67) | 0.919 (0.619–1.366) | 0.678 | 0.91 (0.611–1.354) | 0.614 | ||
| Over-dominant | TT-CC | 211 (58.13) | 90 (60) | 1 | 1 | |||
| TC | 134 (36.91) | 51 (34) | 0.875 (0.582–1.315) | 0.52 | 0.874 (0.581–1.361) | 0.519 | ||
Notes: a P-value were analyzed by χ2 test or Fisher’s exact tests. b P-value were analyzed by logical regression adjusted for age and smoking status. p < 0.05 represents significant difference.
Abbreviations: SNP, single nucleotide polymorphism; PH, pulmonary hypertension; COPD, Chronic obstructive pulmonary disease; CI, confidence interval; OR, odds ratio.
Stratified analysis of association between TRPV1 SNPs (rs465563, rs3744683, rs224495 and rs4790521) and smoking status
| SNPs | Genotypes | Nonsmokers (n = 247) | Former-smokers (n = 454) | Current-smokers (n = 318) | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Control (n = 121) | COPD (n = 126) | Control (n = 240) | COPD (n = 214) | Control (n = 145) | COPD (n = 173) | |||||
| rs465563 | G/G | 11 (9.09) | 8 (6.35) | 21 (8.75) | 23 (10.75) | 11 (7.59) | 16 (9.25) | |||
| A/A | 61 (50.41) | 69 (54.76) | 0.779 | 109 (45.42) | 90 (42.06) | 0.119 | 72 (49.66) | 86 (49.71) | 0.58 | |
| G/A | 45 (37.19) | 43 (34.13) | 0.87 | 105 (43.75) | 92 (43) | 0.2 | 59 (40.69) | 67 (38.73) | 0.576 | |
| G:A | 67:167 | 59:181 | 0.372 | 147:323 | 138:272 | 0.471 | 81:203 | 99:239 | 0.859 | |
| rs3744683 | T/T | 107 (88.43) | 111 (88.1) | 207 (86.25) | 181 (84.58) | 124 (85.52) | 162 (93.64) | |||
| C/C | 0 | 1 (0.79) | 0.993 | 0 | 1 (0.47) | 0.993 | 0 | 0 | - | |
| T/C | 14 (11.57) | 11 (8.73) | 0.43 | 33 (13.75) | 28 (13.08) | 0.442 | 20 (13.79) | 11 (6.36) | 0.031 | |
| T:C | 228:14 | 233:13 | 0.845 | 447:33 | 390:30 | 0.896 | 268:20 | 335:11 | 0.04 | |
| rs224495 | G/G | 74 (61.16) | 85 (67.46) | 143 (59.58) | 117 (54.67) | 96 (66.21) | 103 (59.54) | |||
| A/A | 3 (2.48) | 3 (2.38) | 0.982 | 10 (4.17) | 8 (3.74) | 0.933 | 5 (3.45) | 11 (6.36) | 0.127 | |
| G/A | 43 (35.54) | 35 (27.78) | 0.399 | 86 (35.83) | 85 (39.72) | 0.276 | 43 (29.66) | 59 (34.1) | 0.274 | |
| G:A | 191:49 | 205:41 | 0.296 | 368:106 | 319:101 | 0.579 | 235:53 | 265:81 | 0.143 | |
| rs4790521 | T/T | 71 (58.68) | 63 (50) | 140 (58.33) | 113 (52.8) | 82 (57.75) | 94 (54.34) | |||
| C/C | 4 (3.31) | 5 (3.97) | 0.845 | 8 (3.33) | 13 (6.07) | 0.281 | 9 (6.21) | 13 (7.51) | 0.773 | |
| T/C | 35 (28.93) | 48 (38.1) | 0.183 | 77 (32.08) | 75 (35.05) | 0.605 | 48 (33.1) | 61 (35.26) | 0.85 | |
| T:C | 177:43 | 174:58 | 0.176 | 357:93 | 301:101 | 0.141 | 212:66 | 249:87 | 0.574 | |
Notes: p < 0.05 represents significant difference. P-values for genotypes were calculated by logistic regression adjusted for age and sex. P-values for allele were calculated by χ2 test or Fisher’s exact tests.
Abbreviations: SNP, single nucleotide polymorphism; COPD, Chronic obstructive pulmonary disease.