| Literature DB >> 33102968 |
Yuemiao Zhang1,2,3,4, Ling Guo1,2,3,4, Zi Wang1,2,3,4, Jinwei Wang1,2,3,4, Lee Er5, Sean J Barbour5,6, Hernan Trimarchi7, Jicheng Lv1,2,3,4, Hong Zhang1,2,3,4.
Abstract
INTRODUCTION: Two prediction models for IgA nephropathy (IgAN) using clinical variables and the Oxford MEST scores were developed and validated in 2 multiethnic cohorts. Additional external validation is required.Entities:
Keywords: IgA nephropathy; calibration; discrimination; external validation; prediction models
Year: 2020 PMID: 33102968 PMCID: PMC7572322 DOI: 10.1016/j.ekir.2020.07.036
Source DB: PubMed Journal: Kidney Int Rep ISSN: 2468-0249
Definitions and units of predictors and outcome
| Variables | Reported cohorts | Current cohort |
|---|---|---|
| Proteinuria, g per 24 h | Proteinuria was estimated from 24-h urine collections within 6 mo of renal biopsy; if not available, the value was estimated from spot urine protein:creatine ratios | Proteinuria was estimated from 24-h urine collections within 2 wk before or after renal biopsy |
| MAP, mm Hg | Blood pressure was taken within 6 mo of renal biopsy. MAP was calculated as 1/3 × SBP + 2/3 × DBP | The blood pressure was measured within 2 weeks of renal biopsy, and MAP was calculated as 1/3 × SBP + 2/3 × DBP |
| eGFR, ml/min per 1.73 m2 | eGFR calculated by CKD-EPI formula using variants collected within 6 months of renal biopsy | eGFR was calculated by CKD-EPI formula, based on variants collected within 2 wk of renal biopsy |
| Age, yr | Age of patient at time of renal biopsy | Same as reported |
| RASB use (0/1) | Use of RASBs (ACE inhibitors or ARBs) before or at the time of renal biopsy | Same as reported |
| Immunosuppressant use (0/1) | Use of immunosuppressive therapy (included but not limited to corticosteroids, azathioprine, mycophenolate mofetil, etc.) before or at time of renal biopsy | Same as reported |
| M | M0: mesangial score <0.5; M1: mesangial score >0.5 | Same as reported |
| E | E1, presence of endothelial hypercellularity | Same as reported |
| S | S1, present of segmental glomerular sclerosis; presence or absence of podocyte hypertrophy/tip lesions | Same as reported |
| T | T0, <25% tubular atrophy or interstitial fibrosis; T1, ∼25%–50% tubular atrophy or interstitial fibrosis; T2, ≥50% tubular atrophy or interstitial fibrosis | Same as reported |
| Outcome | ||
| 50% decline of eGFR | First occurrence of eGFR <50% of baseline eGFR at renal biopsy | Same as reported |
| ESRD | eGFR was <15 ml/min per 1.73 m2, or the start of renal replacement therapy (dialysis or kidney transplant) | Same as reported |
ACE, angiotensin-converting enzyme; ARB, aldosterone receptor blocker; CKD-EPI, Chronic Kidney Disease Epidemiology Collaboration; DBP, diastolic blood pressure; eGFR, estimated glomerular filtration rate; ESRD, end-stage renal disease; MAP, mean arterial pressure; MEST, M = mesangial hypercellularity, E = endothelial hypercellularity, S = segmental sclerosis, T = tubular atrophy or interstitial fibrosis; RASB, renin-angiotensin system blocker; SBP, systolic blood pressure.
Figure 1(a) Enrollment flowchart and (b) cumulative incidence of the primary outcome in the current cohort. Overall, 1275 of the original 1476 patients remained in the final cohort, including 1169 Chinese patients and 106 Argentinian patients. Among the excluded patients, 92 had other forms of glomerulopathy, 59 were <18 years old, 12 had end-stage renal disease at the time of renal biopsy, 22 were without available MEST score, and 16 lacked medication information. ESRD, end-stage renal disease; MEST, M = mesangial hypercellularity, E = endothelial hypercellularity, S = segmental sclerosis, T = tubular atrophy and interstitial fibrosis; RASB, renin-angiotensin system blocker.
Description and comparison of the current and reported cohorts
| Characteristics | Reported derivation cohort | Reported validation cohort | Our validation cohort |
|---|---|---|---|
| Number of patients | 2781 | 1146 | 1275 |
| Follow-up time, median (IQR), yr | 4.8 (3.0–7.6) | 5.8 (3.4–8.5) | 3.8 (2.1–6.9) |
| Year of biopsy, median (IQR) | 2006 (2004–2008) | 1998 (1993–2003) | 2010 (2006–2013) |
| Age, median (IQR), yr | 35.6 (28.2–45.4) | 34.8 (26.9–45.0) | 34 (27–42) |
| Male, | 1608 (57.8) | 565 (49.3) | 638 (50.0) |
| Race, | |||
| Caucasian | 1167 (42.0) | 176 (15.5) | 106 (8.3) |
| Chinese | 1021 (36.7) | 292 (25.8) | 1169 (91.7) |
| Japanese | 569 (20.5) | 616 (54.4) | — |
| Other | 22 (0.8) | 49 (4.3) | — |
| SCr at biopsy, median (IQR), μmol/l | 92.0 (70.7–123.8) | 84.0 (66.2–111.4) | 90.20 (71.3–120.2) |
| eGFR at biopsy, median (IQR), ml/min per 1.73 m2 | 83.0 (56.7–108.0) | 89.7 (65.3–112.7) | 82.8 (59.9–104.6) |
| <30, | 142 (5.1) | 37 (3.2) | 44 (3.5) |
| ∼30–60, | 657 (23.6) | 191 (16.7) | 276 (21.6) |
| ∼60–90, | 800 (28.%) | 350 (30.5) | 417 (32.7) |
| ≥90 | 1182 (42.5) | 568 (49.6) | 538 (42.2) |
| MAP at biopsy, median (IQR), mm Hg | 96.7 (88.7–106.3) | 93.3 (85.0–103.3) | 93.3 (86.7–100.0) |
| Proteinuria at biopsy, median (IQR), g/d | 1.2 (0.7–2.2) | 1.3 (0.6–2.4) | 1.2 (0.7–2.3) |
| <0.5, | 383 (13.9) | 221 (19.4) | 217 (17.0) |
| ∼0.5–1, | 772 (28.1) | 209 (18.3) | 306 (24.0) |
| ∼1–2, | 817 (29.7) | 352 (30.8) | 370 (29.0) |
| ∼2–3, | 360 (13.1) | 145 (12.7) | 158 (12.4) |
| ≥3, | 415 (15.1) | 215 (18.8) | 224 (17.6) |
| MEST histologic score, | |||
| M1 | 1054 (38.0) | 481 (42.0) | 570 (44.7) |
| E1 | 478 (17.3) | 476 (41.5) | 385 (30.2) |
| S1 | 2137 (77.0) | 912 (79.6) | 768 (60.2) |
| T1 | 686 (24.7) | 207 (18.1) | 306 (24.0) |
| T2 | 128 (4.6) | 122 (10.6) | 112 (8.8) |
| RASB use, | |||
| At biopsy | 862 (32.4) | 320 (30.0) | 926 (72.6) |
| After biopsy | 2400 (86.7) | 708 (66.4) | 1164 (91.3) |
| Immunosuppressant use, | |||
| At biopsy | 252 (9.1) | 81 (7.1) | 142 (11.1) |
| After biopsy | 1209 (43.5) | 359 (31.3) | 432 (33.9) |
| Primary outcome | |||
| 50% decline in eGFR | 420 (15.1) | 210 (18.3) | 173 (13.5) |
| ESRD | 372 (13.4) | 155 (13.5) | 110 (8.6) |
| Total primary outcomes | 492 (17.7) | 213 (18.6) | 181 (14.2) |
eGFR, estimated glomerular filtration rate; ESRD, end-stage renal disease; IQR, interquantile range; MAP, mean arterial pressure; MEST, M = mesangial hypercellularity, E = endothelial hypercellularity, S = segmental sclerosis, T = tubular atrophy or interstitial fibrosis; RASB, renin-angiotensin system blocker; SCr, serum creatinine.
Total primary outcomes defined as the first event of either 50% decline in eGFR or ESRD.
Discrimination measures in the current and reported cohorts
| Group | Regression slope on linear prediction | C-statistic | R2D (%) |
|---|---|---|---|
| Full model without race | |||
| Reported derivation cohort | — | 0.81 (0.80–0.81) | 25.3 |
| Reported validation cohort | 1.19 | 0.81 (0.80–0.82) | 35.3 |
| Our validation cohort | 0.87 (0.73–1.00) | 0.81 (0.80–0.81) | 37.6 |
| Full model with race | |||
| Reported derivation cohort | — | 0.82 (0.81–0.82) | 26.3 |
| Reported validation cohort | 1.12 | 0.82 (0.81–0.83) | 35.3 |
| Our validation cohort | 0.89 (0.75–1.03) | 0.81 (0.81–0.82) | 42.2 |
Figure 2Kaplan-Meier curves for survival probability of primary outcome in 4 risk groups based on percentile of the linear predictor. Full model without race (a). Full model with race (b). The 4 risk groups were defined as <16th (low risk), ∼16th to <50th (intermediate risk), ∼50th to <84th (higher risk), and ≥84th (the highest risk) percentiles of the linear predictor from the full model without and with race, respectively.
Hazard ratios, mean predicted 5-year risk of primary outcome, and rate of kidney function decline in subgroups based on linear predictor
| Measure | Hazard ratio | Mean predicted 5-yr risk, % | eGFR decline slope |
|---|---|---|---|
| Full model without race | |||
| Low-risk group | Reference | 2.51 | −1.67 |
| Intermediate-risk group | 2.57 (1.16–5.72) | 5.37 | −1.87 |
| Higher risk group | 3.85 (1.75–8.46) | 15.57 | −1.95 |
| Highest risk group | 20.35 (9.29–44.57) | 48.13 | −3.72 |
| Full model with race | |||
| Low-risk group | Reference | 5.22 | −0.67 |
| Intermediate-risk group | 1.33 (0.55–3.23) | 10.25 | −1.56 |
| Higher risk group | 2.97 (1.28–6.87) | 25.81 | −2.27 |
| Highest risk group | 8.29 (3.84–20.71) | 61.22 | −3.32 |
eGFR, estimated glomerular filtration rate.
Subgroups were <16th (low risk), ∼16th to <50th (intermediate risk), ∼50th to <84th (higher risk), and ≥84th (the highest risk) percentiles of the linear predictor from the full models without and with race, respectively.
Figure 3Estimates of the baseline survival function in the reported and the current data sets. Full model without race (a). Full model with race (b). Baseline survival function of the reported data set is shown in red, and the baseline survival function of the current data set is shown in blue.
Figure 4Comparison of observed and predicted survival probability of primary outcome over the duration of follow-up. Full model without race (a). Full model with race (b). The 4 risk groups were defined as <16th (low risk), ∼16th to <50th (intermediate risk), ∼50th to <84th (higher risk), and ≥84th (the highest risk) percentiles of the linear predictor from the full model without and with race, respectively. Predicted risks were mean predicted risk calculated according to the reported models (in red), and observed risks were Kaplan-Meier estimated risk probability (in black).
Figure 5Calibration curves depicting the predicted-vs.-observed survival probability of the 5-year primary outcome. Full model without race (a). Full model with race (b).