Literature DB >> 33100920

Validation of the International Space Station Smart Sample Concentrator for Microbial Monitoring of Low Biomass Water Samples.

Camilla Urbaniak1,2, Snehit Mhatre1, Tristan Grams1, Ceth Parker1, Kasthuri Venkateswaran1.   

Abstract

Microbial monitoring on the International Space Station (ISS) is essential to keep astronauts healthy. Current practice involves culture-based methods, but future directives by the National Aeronautics and Space Administration (NASA) will require the use of molecular-based approaches, such as quantitative PCR (qPCR). However, in order to successfully and reliably detect the allowable limit of 5 × 104 colony forming units (CFUs) of bacteria per liter in potable water on the ISS with qPCR, water concentration must first be performed. This report presents the data from a validation study of a NASA-sponsored small business research initiative to develop a microgravity-compatible, automated water concentrator to be used on the ISS, which has been named the ISS Smart Sample Concentrator (iSSC). Efficiency and reproducibility of the iSSC were compared with a ground-based automated water concentrator and the standard Millipore manual filtration. Using 104 CFU/L of Sphingomonas paucimobilis, Ralstonia pickettii, and Cupriavidus basilensis and a mixed microbial community, we have shown, through culture and qPCR, that the iSSC is comparable, if not better, at recovering and concentrating bacteria from large volumes of water, with good reproducibility. © Association of Biomolecular Resource Facilities.

Entities:  

Keywords:  microgravity · molecular biology · qPCR colony counts

Year:  2020        PMID: 33100920      PMCID: PMC7566613          DOI: 10.7171/jbt.20-3104-005

Source DB:  PubMed          Journal:  J Biomol Tech        ISSN: 1524-0215


  9 in total

1.  Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5'-nuclease assays.

Authors:  M T Suzuki; L T Taylor; E F DeLong
Journal:  Appl Environ Microbiol       Date:  2000-11       Impact factor: 4.792

2.  Evaluation of procedures for the collection, processing, and analysis of biomolecules from low-biomass surfaces.

Authors:  K Kwan; M Cooper; M T La Duc; P Vaishampayan; C Stam; J N Benardini; G Scalzi; C Moissl-Eichinger; K Venkateswaran
Journal:  Appl Environ Microbiol       Date:  2011-03-11       Impact factor: 4.792

3.  Differential recovery of phylogenetically disparate microbes from spacecraft-qualified metal surfaces.

Authors:  E Bargoma; M T La Duc; K Kwan; P Vaishampayan; K Venkateswaran
Journal:  Astrobiology       Date:  2013-02       Impact factor: 4.335

4.  Characterization of the survival ability of Cupriavidus metallidurans and Ralstonia pickettii from space-related environments.

Authors:  K Mijnendonckx; A Provoost; C M Ott; K Venkateswaran; J Mahillon; N Leys; R Van Houdt
Journal:  Microb Ecol       Date:  2012-12-05       Impact factor: 4.552

5.  Draft Genome Sequences of Ralstonia pickettii Strains SSH4 and CW2, Isolated from Space Equipment.

Authors:  Pieter Monsieurs; Kristel Mijnendonckx; Ann Provoost; Kasthuri Venkateswaran; C Mark Ott; Natalie Leys; Rob Van Houdt
Journal:  Genome Announc       Date:  2014-09-04

6.  Nanopore DNA Sequencing and Genome Assembly on the International Space Station.

Authors:  Sarah L Castro-Wallace; Charles Y Chiu; Kristen K John; Sarah E Stahl; Kathleen H Rubins; Alexa B R McIntyre; Jason P Dworkin; Mark L Lupisella; David J Smith; Douglas J Botkin; Timothy A Stephenson; Sissel Juul; Daniel J Turner; Fernando Izquierdo; Scot Federman; Doug Stryke; Sneha Somasekar; Noah Alexander; Guixia Yu; Christopher E Mason; Aaron S Burton
Journal:  Sci Rep       Date:  2017-12-21       Impact factor: 4.379

7.  Characterization of the total and viable bacterial and fungal communities associated with the International Space Station surfaces.

Authors:  Aleksandra Checinska Sielaff; Camilla Urbaniak; Ganesh Babu Malli Mohan; Victor G Stepanov; Quyen Tran; Jason M Wood; Jeremiah Minich; Daniel McDonald; Teresa Mayer; Rob Knight; Fathi Karouia; George E Fox; Kasthuri Venkateswaran
Journal:  Microbiome       Date:  2019-04-08       Impact factor: 14.650

8.  Microbiomes of the dust particles collected from the International Space Station and Spacecraft Assembly Facilities.

Authors:  Aleksandra Checinska; Alexander J Probst; Parag Vaishampayan; James R White; Deepika Kumar; Victor G Stepanov; George E Fox; Henrik R Nilsson; Duane L Pierson; Jay Perry; Kasthuri Venkateswaran
Journal:  Microbiome       Date:  2015-10-27       Impact factor: 14.650

9.  Genome Sequences of Cupriavidus metallidurans Strains NA1, NA4, and NE12, Isolated from Space Equipment.

Authors:  Pieter Monsieurs; Kristel Mijnendonckx; Ann Provoost; Kasthuri Venkateswaran; C Mark Ott; Natalie Leys; Rob Van Houdt
Journal:  Genome Announc       Date:  2014-07-24
  9 in total
  1 in total

1.  Bacterial bioburden and community structure of potable water used in the International Space Station.

Authors:  Tomoaki Ichijo; Kimiko Uchii; Kazuma Sekimoto; Takashi Minakami; Takashi Sugita; Masao Nasu; Takashi Yamazaki
Journal:  Sci Rep       Date:  2022-09-29       Impact factor: 4.996

  1 in total

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