Literature DB >> 33099120

Identification of human microRNA-disease association via hypergraph embedded bipartite local model.

Yijie Ding1, Limin Jiang2, Jijun Tang3, Fei Guo4.   

Abstract

MicroRNA (miRNA) plays an important role in life processes. In recent years, predicting the association between miRNAs and diseases has become a research hotspot. However, biological experiments take a lot of time and cost to identify pathogenic miRNAs. Computational biology-based methods can effectively improve accuracy of recognition. In our study, miRNAs-disease associations are predicted by a hypergraph regularized bipartite local model (HGBLM), which is based on hypergraph embedded Laplacian support vector machine (LapSVM). On benchmark dataset, the results of our method are comparable and even better than existing models.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Bipartite network; Graph regularized model; Human MicroRNA-disease association; Hypergraph learning; Laplacian support vector machine

Mesh:

Substances:

Year:  2020        PMID: 33099120     DOI: 10.1016/j.compbiolchem.2020.107369

Source DB:  PubMed          Journal:  Comput Biol Chem        ISSN: 1476-9271            Impact factor:   2.877


  6 in total

1.  iDNA-MT: Identification DNA Modification Sites in Multiple Species by Using Multi-Task Learning Based a Neural Network Tool.

Authors:  Xiao Yang; Xiucai Ye; Xuehong Li; Lesong Wei
Journal:  Front Genet       Date:  2021-03-31       Impact factor: 4.599

2.  Identification of Vesicle Transport Proteins via Hypergraph Regularized K-Local Hyperplane Distance Nearest Neighbour Model.

Authors:  Rui Fan; Bing Suo; Yijie Ding
Journal:  Front Genet       Date:  2022-07-13       Impact factor: 4.772

3.  4mCPred-MTL: Accurate Identification of DNA 4mC Sites in Multiple Species Using Multi-Task Deep Learning Based on Multi-Head Attention Mechanism.

Authors:  Rao Zeng; Song Cheng; Minghong Liao
Journal:  Front Cell Dev Biol       Date:  2021-05-10

4.  Assessing Dry Weight of Hemodialysis Patients via Sparse Laplacian Regularized RVFL Neural Network with L2,1-Norm.

Authors:  Xiaoyi Guo; Wei Zhou; Qun Lu; Aiyan Du; Yinghua Cai; Yijie Ding
Journal:  Biomed Res Int       Date:  2021-02-04       Impact factor: 3.411

5.  Identifying potential association on gene-disease network via dual hypergraph regularized least squares.

Authors:  Hongpeng Yang; Jijun Tang; Yijie Ding; Fei Guo
Journal:  BMC Genomics       Date:  2021-08-09       Impact factor: 3.969

6.  RFLMDA: A Novel Reinforcement Learning-Based Computational Model for Human MicroRNA-Disease Association Prediction.

Authors:  Linqian Cui; You Lu; Jiacheng Sun; Qiming Fu; Xiao Xu; Hongjie Wu; Jianping Chen
Journal:  Biomolecules       Date:  2021-12-05
  6 in total

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