Literature DB >> 33092902

Unbelievable but True: Epigenetics and Chromatin in Fungi.

Hiten D Madhani1.   

Abstract

Evolutionary innovations in chromatin biology have been recently discovered through the study of fungi. In Saccharomyces cerevisiae, a prion form of a deacetylase complex assembles over subtelomeric domains that produces a heritable gene expression state that enables resistance to stress. In Candida albicans, stress triggers adaptive chromosome destabilization via erasure a centromeric histone H3, CENP-A; a process that cooperates with a newly evolved H2A variant lacking a mitotic phosphorylation site. Finally, in Cryptococcus neoformans, the loss of a cytosine DNA methyltransferase at least 50 million years ago has enabled the Darwinian evolution of methylation patterns over geological timescales. These studies reveal a remarkable genetic and epigenetic evolutionary plasticity of the chromatin fiber, despite the highly conserved structure of the nucleosome.
Copyright © 2020. Published by Elsevier Ltd.

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Year:  2020        PMID: 33092902      PMCID: PMC8994648          DOI: 10.1016/j.tig.2020.09.016

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  31 in total

Review 1.  Prions.

Authors:  David W Colby; Stanley B Prusiner
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-01-01       Impact factor: 10.005

2.  What do you mean, "epigenetic"?

Authors:  Carrie Deans; Keith A Maggert
Journal:  Genetics       Date:  2015-04       Impact factor: 4.562

3.  A Prion Epigenetic Switch Establishes an Active Chromatin State.

Authors:  Zachary H Harvey; Anupam K Chakravarty; Raymond A Futia; Daniel F Jarosz
Journal:  Cell       Date:  2020-02-27       Impact factor: 41.582

Review 4.  The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies.

Authors:  Joseph W Spatafora; M Catherine Aime; Igor V Grigoriev; Francis Martin; Jason E Stajich; Meredith Blackwell
Journal:  Microbiol Spectr       Date:  2017-09

Review 5.  Specification of Physiologic and Disease States by Distinct Proteins and Protein Conformations.

Authors:  Daniel F Jarosz; Vikram Khurana
Journal:  Cell       Date:  2017-11-16       Impact factor: 41.582

6.  Evolutionary Persistence of DNA Methylation for Millions of Years after Ancient Loss of a De Novo Methyltransferase.

Authors:  Sandra Catania; Phillip A Dumesic; Harold Pimentel; Ammar Nasif; Caitlin I Stoddard; Jordan E Burke; Jolene K Diedrich; Sophie Cooke; Terrance Shea; Elizabeth Gienger; Robert Lintner; John R Yates; Petra Hajkova; Geeta J Narlikar; Christina A Cuomo; Jonathan K Pritchard; Hiten D Madhani
Journal:  Cell       Date:  2020-02-20       Impact factor: 41.582

Review 7.  Ultrasensitivity part III: cascades, bistable switches, and oscillators.

Authors:  James E Ferrell; Sang Hoon Ha
Journal:  Trends Biochem Sci       Date:  2014-11-10       Impact factor: 13.807

8.  dim-2 encodes a DNA methyltransferase responsible for all known cytosine methylation in Neurospora.

Authors:  E Kouzminova; E U Selker
Journal:  EMBO J       Date:  2001-08-01       Impact factor: 11.598

9.  Applying genetics and molecular biology to the study of the human pathogen Cryptococcus neoformans.

Authors:  Cheryl D Chun; Hiten D Madhani
Journal:  Methods Enzymol       Date:  2010-03-01       Impact factor: 1.600

Review 10.  Polycomb Repression without Bristles: Facultative Heterochromatin and Genome Stability in Fungi.

Authors:  John B Ridenour; Mareike Möller; Michael Freitag
Journal:  Genes (Basel)       Date:  2020-06-09       Impact factor: 4.096

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  3 in total

Review 1.  Fungi as mediators linking organisms and ecosystems.

Authors:  Mohammad Bahram; Tarquin Netherway
Journal:  FEMS Microbiol Rev       Date:  2022-03-03       Impact factor: 15.177

2.  Chitosan induces differential transcript usage of chitosanase 3 encoding gene (csn3) in the biocontrol fungus Pochonia chlamydosporia 123.

Authors:  Christine Sambles; Marta Suarez-Fernandez; Federico Lopez-Moya; Luis Vicente Lopez-Llorca; David J Studholme
Journal:  BMC Genomics       Date:  2022-02-05       Impact factor: 3.969

Review 3.  Epigenetic Regulation of Antifungal Drug Resistance.

Authors:  Sandip Patra; Mayur Raney; Aditi Pareek; Rupinder Kaur
Journal:  J Fungi (Basel)       Date:  2022-08-19
  3 in total

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