Literature DB >> 33089595

T4-like myovirus community shaped by dispersal and deterministic processes in the South China Sea.

Huifang Li1, Lu Liu1, Yu Wang1, Lanlan Cai2, Maoqiu He3, Long Wang1, Chen Hu1, Nianzhi Jiao1, Rui Zhang1.   

Abstract

As the most abundant and genetically diverse biological entities, viruses significantly influence ecological, biogeographical and evolutionary processes in the ocean. However, the biogeography of marine viruses and the drivers shaping viral community are unclear. Here, the biogeographic patterns of T4-like viruses and the relative impacts of deterministic (environmental selection) and dispersal (spatial distance) processes were investigated in the northern South China Sea. The dominant viral operational taxonomic units were affiliated with previously defined Marine, Estuary, Lake and Paddy Groups. A clear viral biogeographic pattern was observed along the environmental gradient from the estuary to open sea. Marine Groups I and IV had a wide geographical distribution, whereas Marine Groups II, III and V were abundant in lower-salinity continental or eutrophic environments. A significant distance-decay pattern was noted for the T4-like viral community, especially for those infecting cyanobacteria. Both deterministic and dispersal processes influenced viral community assembly, although environmental selection (e.g. temperature, salinity, bacterial abundance and community, etc.) had a greater impact than spatial distance. Network analysis confirmed the strong association between viral and bacterial community composition, and suggested a diverse ecological relationship (e.g. lysis, co-infection or mutualistic) between and within viruses and their potential bacterial hosts.
© 2020 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.

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Year:  2020        PMID: 33089595      PMCID: PMC7984403          DOI: 10.1111/1462-2920.15290

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  68 in total

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2.  Seasonality and monthly dynamics of marine myovirus communities.

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7.  Response of Prochlorococcus ecotypes to co-culture with diverse marine bacteria.

Authors:  Daniel Sher; Jessie W Thompson; Nadav Kashtan; Laura Croal; Sallie W Chisholm
Journal:  ISME J       Date:  2011-02-17       Impact factor: 10.302

8.  Ocean currents shape the microbiome of Arctic marine sediments.

Authors:  Leila J Hamdan; Richard B Coffin; Masoumeh Sikaroodi; Jens Greinert; Tina Treude; Patrick M Gillevet
Journal:  ISME J       Date:  2012-11-29       Impact factor: 10.302

9.  Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees.

Authors:  Ivica Letunic; Peer Bork
Journal:  Nucleic Acids Res       Date:  2016-04-19       Impact factor: 16.971

10.  The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples.

Authors:  Shannon J Williamson; Douglas B Rusch; Shibu Yooseph; Aaron L Halpern; Karla B Heidelberg; John I Glass; Cynthia Andrews-Pfannkoch; Douglas Fadrosh; Christopher S Miller; Granger Sutton; Marvin Frazier; J Craig Venter
Journal:  PLoS One       Date:  2008-01-23       Impact factor: 3.240

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