| Literature DB >> 33088315 |
Nasrin Someeh1, Mohammad Asghari Jafarabadi1, Seyed Morteza Shamshirgaran2, Farshid Farzipoor1.
Abstract
BACKGROUND: The artificial intelligence field is obtaining ever-increasing interests for enhancing the accuracy of diagnosis and the quality of patient care. Deep learning neural network (DLNN) approach was considered in patients with brain stroke (BS) to predict and classify the outcome by the risk factors.Entities:
Keywords: Brain stroke; data mining; deep learning; predicting; risk factors
Year: 2020 PMID: 33088315 PMCID: PMC7554543 DOI: 10.4103/jrms.JRMS_268_20
Source DB: PubMed Journal: J Res Med Sci ISSN: 1735-1995 Impact factor: 1.852
Demographic characteristics of the study participants and the results of log-rank test
| Characteristics | Death from BS, frequency (%) | Incidence rate (per 10,000) (95%CI) | |
|---|---|---|---|
| Age category (years) | |||
| ≤58 | 88 (26.67) | 27 (19-39) | Referent |
| 59-68 | 77 (23.33) | 65 (47-89) | |
| 69-75 | 102 (30.91) | 153 (123-190) | |
| 76+ | 63 (19.01) | 204 (155-270) | |
| Sex | |||
| Female | 111 (56) | 67 (54-82) | Referent |
| Male | 88 (44) | 100 (83-120) | |
| Employment status | |||
| Employed | 59 (30) | 70 (55-91) | Referent |
| Unemployed | 140 (70) | 88 (74-103) | 0.175 |
| Education level | |||
| ≤Diploma | 322 (97) | 83 (72-96) | Referent |
| Academic | 10 (3) | 46 (17-124) | 0.299 |
| Place of residence | |||
| Urban | 201 (61) | 73 (61-87) | Referent |
| Rural | 131 (39) | 98 (79-122) | 0.114 |
P-value based on pairwise log-rank test as compared to the reference category (adjusted for multiple comparisons). Significant P-values are shown in bold font. CI=Confidence interval; BS=Brain stroke
Clinical profile of study participants and the results of log-rank test
| Risk factors | Frequency (%) | Incidence rate (per 10000) (95% CI) | |
|---|---|---|---|
| Physical activity | |||
| Yes | 46 (14) | 56 (37-85) | |
| No | 284 (86) | 86 (74-100) | Referent |
| Smoking | |||
| Yes | 64 (19) | 79 (57-110) | 0.925 |
| No | 267 (81) | 82 (71-96) | Referent |
| History of cerebrovascular | |||
| Yes | 80 (24) | 86 (51-94) | 0.295 |
| No | 252 (76) | 69 (74-100) | Referent |
| History of myocardial infraction | |||
| Yes | 24 (7) | 58 (34-100) | 0.237 |
| No | 308 (93) | 84 (73-97) | Referent |
| History of blood pressure | |||
| Yes | 196 (59) | 96 (81-115) | |
| No | 135 (41) | 64 (51-81) | Referent |
| Heart disease | |||
| Yes | 85 (26) | 101 (78-131) | 0.124 |
| No | 245 (74) | 75 (64-89) | Referent |
| History of diabetes | |||
| Yes | 59 (18) | 114 (84-154) | 0.0722 |
| No | 270 (82) | 76 (65-89) | Referent |
| History of hyperlipoproteinemia | |||
| Yes | 61 (18) | 55 (38-79) | |
| No | 269 (82) | 89 (76-103) | Referent |
| Cerebrovascular type | |||
| Ischemic | 66 (20) | 118 (88-158) | |
| Hemorrhagic | 257 (80) | 75 (64-88) | Referent |
| Oral contraceptive pill use | |||
| Yes | 60 (36) | 28 (18-43) | |
| No | 105 (64) | 114 (90-144) | Referent |
P-value based on pairwise log-rank test as compared to the reference category (adjusted for multiple comparisons). Significant P-values are shown in bold font. CI=Confidence interval
Results of comparing 81 selected deep learning neural network models
| Model | 95% CI | Ac (%) | ||||
|---|---|---|---|---|---|---|
| SE | SP | PPV | NPV | ROC area | ||
| 1: rect10.1000.5.1 | 100 (96.3-100) | 99 (96.499.9) | 98 (93-99.8) | 100 (98.1-100) | 0.99 (0.98-1.0) | 99.3 |
| 2: rect.30.1000.5.1 | 99 (94.5-100) | 99.5 (97.2-100) | 99 (94.5-100) | 99.5 (97.2-100) | 0.99 (0.98-1.0) | 99.3 |
| 3: rect.50.200.9.1 | 94.9 (88.6-98.3) | 94.4 (90.2-97.2) | 89.5 (82-94.7) | 97.4 (94-99.1) | 0.95 (0.92-0.97) | 94.5 |
| 4: rect.50.300.9.1 | 97 (91.4-99.4) | 96.4 (92.8-98.6) | 93.2 (86.5-97.2) | 98.4 (95.5-99.7) | 0.97 (0.95-0.99) | 96.6 |
| 5: rect.50.400.9.1 | 98 (92.9-99.8) | 97 (93.5-98.9) | 94.2 (87.8-97.8) | 99 (96.3-99.9) | 0.98 (0.96-0.99) | 97.3 |
| 6: rect.50.500.9.1 | 100 (96.3-100) | 97.5 (94.2-99.2) | 95.2 (89.1-98.4) | 100 (98.1-100) | 0.99 (0.98-1.0) | 98.3 |
| 7: rect.50.500.9.05 | 96 (90-98.9) | 96.4 (92.8-98.6) | 93.1 (86.4-97.2) | 97.9 (94.8-99.4) | 0.96 (0.94-0.99) | 96.3 |
| 8: rec.50.1000.0.9.05 | 100 (96.3-100) | 97.5 (94.2-99.2) | 95.2 (89.1-98.4) | 100 (98.1-100) | 0.99 (0.98-1.0) | 98.3 |
| 9: tanh.10.400.1.1 | 98 (92.9-99.8) | 94.9 (90.9-97.5) | 90.7 (83.5-95.4) | 98.9 (96.2-99.9) | 0.97 (0.94-0.99) | 96.0 |
| 10: tanh.10.300.5.1 | 99 (94.5-100) | 97 (93.5-98.9) | 94.2 (87.9-97.9) | 99.5 (97.1-100) | 0.98 (0.96-1.0) | 96.7 |
| 11: tanh.10.200.5.1 | 99 (94.5-100) | 92.9 (88.4-96.1) | 87.5 (79.9-93) | 99.5 (97-100) | 0.96 (0.94-0.98) | 99.4 |
| 12: tanh.10.100.5.1 | 88.9 (81-94.3) | 90.9 (85.9-94.5) | 83 (74.5-89.6) | 94.2 (89.9-97.1) | 0.90 (0.86-0.94) | 90.2 |
| 13: tanh.10.200.9.1 | 94.9 (88.6-98.3) | 93.9 (89.6-96.8) | 88.7 (81.1-94) | 97.4 (94-99.1) | 0.94 (0.92-0.97) | 94.3 |
| 14: tanh.10.300.9.1 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 15: tanh.10.400.9.1 | 94.9 (88.6-98.3) | 94.4 (90.2-97.2) | 89.5 (82-94.7) | 97.4 (94-99.1) | 0.95 (0.92-0.97) | 94.6 |
| 16: tanh.10.500.9.1 | 94.9 (88.6-98.3) | 94.9 (90.9-97.5) | 90.4 (83-95.3) | 97.4 (94-99.1) | 0.95 (0.92-0.98) | 94.9 |
| 17: tanh.10.1000.9.1 | 99 (94.5-100) | 99.5 (97.2-100) | 99 (94.5-100) | 99.5 (97.2-100) | 0.99 (0.98-1.0) | 99.3 |
| 18: tanh.10.1000.9.05 | 93.9 (87.3-97.7) | 95.4 (91.5-97.9) | 91.2 (83.9-95.9) | 96.9 (93.4-98.9) | 0.95 (0.92-0.98) | 94.9 |
| 19: tanh.10.500.9.05 | 94.9 (88.6-98.3) | 93.9 (89.6-96.8) | 88.7 (81.1-94) | 97.4 (94-99.1) | 0.94 (0.92-0.97) | 94.6 |
| 20: tanh.10.400.0.05 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.3 |
| 21: tanh.10.300.05.1 | 94.9 (88.6-98.3) | 93.4 (89-96.4) | 87.9 (80.1-93.4) | 97.4 (93.9-99.1) | 0.94 (0.91-0.97) | 94.9 |
| 22: tanh.10.1000.0.05 | 94.9 (88.6-98.3) | 95.9 (92.2-98.2) | 92.2 (85.1-96.6) | 97.4 (94.1-99.2) | 0.95 (0.93-0.98) | 94.6 |
| 23: tanh.10.500.0.05 | 89.9 (82.2-95) | 90.4 (85.3-94.1) | 82.4 (73.9-89.1) | 94.7 (90.4-97.4) | 0.90 (0.87-0.94) | 90.2 |
| 24: tanh.10.400.0.05 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 25: tanh.10.400.0.05 | 94.9 (88.6-98.3) | 93.4 (89-96.4) | 87.9 (80.1-93.4) | 97.4 (93.9-99.1) | 0.94 (0.91-0.97) | 94.9 |
| 26: tanh.10.400.0.05 | 89.9 (82.2-95) | 90.4 (85.3-94.1) | 82.4 (73.9-89.1) | 94.7 (90.4-97.4) | 0.90 (0.87-0.94) | 90.2 |
| 27: tanh.10.1000.5.01 | 91.9 (84.7-96.4) | 90.4 (85.3-94.1) | 82.7 (74.3-89.3) | 95.7 (91.7-98.1) | 0.91 (0.88-0.95) | 90.9 |
| 28: tanh.10.1000.1.05 | 94.9 (88.6-98.3) | 94.4 (90.2-97.2) | 89.5 (82-94.7) | 97.4 (94-99.1) | 0.95 (0.92-0.97) | 94.9 |
| 29: tanh.10.500.1.05 | 96 (90-98.9) | 93.4 (89-96.4) | 88 (80.3-93.4) | 97.9 (94.6-99.4) | 0.95 (0.92-0.97) | 94.3 |
| 30: tanh.10.400.1.05 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 31: tanh.10.300.1.05 | 96 (90-98.9) | 93.4 (89-96.4) | 88 (80.3-93.4) | 97.9 (94.6-99.4) | 0.95 (0.92-0.97) | 94.3 |
| 32: tanh.20.1000.1.01 | 96 (90-98.9) | 93.4 (89-96.4) | 88 (80.3-93.4) | 97.9 (94.6-99.4) | 0.95 (0.92-0.97) | 94.3 |
| 33: tanh.20.1000.1.05 | 94.9 (88.6-98.3) | 96.4 (92.8-98.6) | 93.1 (86.2-97.2) | 97.4 (94.1-99.2) | 0.96 (0.93-0.98) | 95.9 |
| 34: tanh.20.500.1.05 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 35: tanh.20.400.1.05 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 36: tanh.20.300.1.05 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 37: tanh.20.200.1.05 | 94.9 (88.6-98.3) | 93.4 (89-96.4) | 87.9 (80.1-93.4) | 97.4 (93.9-99.1) | 0.94 (0.91-0.97) | 93.9 |
| 38: tanh.20.1000.5.01 | 94.9 (88.6-98.3) | 93.4 (89-96.4) | 87.9 (80.1-93.4) | 97.4 (93.9-99.1) | 0.94 (0.91-0.97) | 93.9 |
| 39: tanh.20.1000.5.05 | 94.9 (88.6-98.3) | 95.9 (92.2-98.2) | 92.2 (85.1-96.6) | 97.4 (94.1-99.2) | 0.95 (0.93-0.98) | 94.6 |
| 40: tanh.20.500.5.05 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 41: tanh.20.400.5.05 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 42: tanh.20.300.5.05 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 43: tanh.20.200.5.05 | 94.9 (88.6-98.3) | 93.4 (89-96.4) | 87.9 (80.1-93.4) | 97.4 (93.9-99.1) | 0.94 (0.91-0.97) | 94.9 |
| 44: tanh.20.100.1.1 | 94.9 (88.6-98.3) | 93.4 (89-96.4) | 87.9 (80.1-93.4) | 97.4 (93.9-99.1) | 0.94 (0.91-0.97) | 93.9 |
| 45: tanh.20.200.1.1 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 46: tanh.20.300.1.1 | 93.9 (87.3-97.7) | 93.9 (89.6-96.8) | 88.6 (80.9-94) | 96.9 (93.3-98.8) | 0.94 (0.91-0.97) | 93.9 |
| 47: tanh.20.400.1.1 | 96 (90-98.9) | 95.4 (91.5-97.9) | 91.3 (84.2-96) | 97.9 (94.8-99.4) | 0.96 (0.93-0.98) | 95.6 |
| 48: tanh.20.500.1.1 | 94.9 (88.6-98.3) | 96.4 (92.8-98.6) | 93.1 (86.2-97.2) | 97.4 (94.1-99.2) | 0.96 (0.93-0.98) | 95.9 |
| 49: tanh.20.1000.1.1 | 99 (94.5-100) | 99.5 (97.2-100) | 99 (94.5-100) | 99.5 (97.2-100) | 0.99 (0.98-1.0) | 99.3 |
| 50: tanh.20.1000.5.1 | 99 (94.5-100) | 99.5 (97.2-100) | 99 (94.5-100) | 99.5 (97.2-100) | 0.99 (0.98-1.0) | 99.3 |
| 51: tanh.20.500.5.1 | 94.9 (88.6-98.3) | 95.9 (92.2-98.2) | 92.2 (85.1-96.6) | 97.4 (94.1-99.2) | 0.95 (0.93-0.98) | 94.6 |
| 52: tanh.20.400.5.1 | 96 (90-98.9) | 95.4 (91.5-97.9) | 91.3 (84.2-96) | 97.9 (94.8-99.4) | 0.96 (0.93-0.98) | 95.6 |
| 53: tanh.20.300.5.1 | 94.9 (88.6-98.3) | 94.4 (90.2-97.2) | 89.5 (82-94.7) | 97.4 (94-99.1) | 0.95 (0.92-0.97) | 94.6 |
| 54: tanh.20.200.5.1 | 94.9 (88.6-98.3) | 94.4 (90.2-97.2) | 89.5 (82-94.7) | 97.4 (94-99.1) | 0.95 (0.92-0.97) | 94.6 |
| 55: tanh.20.100.5.1 | 94.9 (88.6-98.3) | 93.4 (89-96.4) | 87.9 (80.1-93.4) | 97.4 (93.9-99.1) | 0.94 (0.91-0.97) | 93.9 |
| 56: tanh.20.100.9.1 | 91.9 (84.7-96.4) | 89.8 (84.8-93.7) | 82 (73.6-88.6) | 95.7 (91.7-98.1) | 0.91 (0.88-0.94) | 90.5 |
| 57: tanh.20.200.9.1 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 58: tanh.20.300.9.1 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 59: tanh.20.400.9.1 | 96 (90-98.9) | 95.4 (91.5-97.9) | 91.3 (84.2-96) | 97.9 (94.8-99.4) | 0.96 (0.93-0.98) | 95.6 |
| 60: tanh.20.500.9.1 | 94.9 (88.6-98.3) | 95.9 (92.2-98.2) | 92.2 (85.1-96.6) | 97.4 (94.1-99.2) | 0.95 (0.93-0.98) | 94.6 |
| 61: rect.50.1000.9.01 | 90.9 (83.4-95.8) | 91.9 (87.1-95.3) | 84.9 (76.6-91.1) | 95.3 (91.2-97.8) | 0.91 (0.88-0.95) | 91.6 |
| 62: rect.20.1000.9.01 | 94.9 (88.6-98.3) | 95.9 (92.2-98.2) | 92.2 (85.1-96.6) | 97.4 (94.1-99.2) | 0.95 (0.93-0.98) | 94.6 |
| 63: rect.20.1000.9.05 | 94.9 (88.6-98.3) | 95.9 (92.2-98.2) | 92.2 (85.1-96.6) | 97.4 (94.1-99.2) | 0.95 (0.93-0.98) | 94.6 |
| 64: rect.50.1000.9.05 | 100 (96.3-100) | 97.5 (94.2-99.2) | 95.2 (89.1-98.4) | 100 (98.1-100) | 0.99 (0.98-1.0) | 98.3 |
| 65: rect.50.500.9.05 | 94.9 (88.6-98.3) | 96.4 (92.8-98.6) | 93.1 (86.2-97.2) | 97.4 (94.1-99.2) | 0.96 (0.93-0.98) | 96.3 |
| 66: rect.50.400.9.05 | 96 (90-98.9) | 95.4 (91.5-97.9) | 91.3 (84.2-96) | 97.9 (94.8-99.4) | 0.96 (0.93-0.98) | 95.6 |
| 67: rect.50.200.9.05 | 83.8 (75.1-90.5) | 94.4 (90.2-97.2) | 88.3 (80-94) | 92.1 (87.5-95.4) | 0.89 (0.85-0.93) | 90.9 |
| 68: rect.50.200.9.1 | 94.9 (88.6-98.3) | 94.4 (90.2-97.2) | 89.5 (82-94.7) | 97.4 (94-99.1) | 0.95 (0.92-0.97) | 94.6 |
| 69: rect.50.300.9.1 | 97 (91.4-99.4) | 96.4 (92.8-98.6) | 93.2 (86.5-97.2) | 98.4 (95.5-99.7) | 0.97 (0.95-0.99) | 96.6 |
| 70: rect.50.400.9.1 | 98 (92.9-99.8) | 97 (93.5-98.9) | 94.2 (87.8-97.8) | 99 (96.3-99.9) | 0.98 (0.96-0.99) | 97.3 |
| 71: sig.30.500.0.3 | 94.9 (88.6-98.3) | 93.9 (89.6-96.8) | 88.7 (81.1-94) | 97.4 (94-99.1) | 0.94 (0.92-0.97) | 94.3 |
| 72: sig30.300.9.5 | 94.9 (88.6-98.3) | 93.9 (89.6-96.8) | 88.7 (81.1-94) | 97.4 (94-99.1) | 0.94 (0.92-0.97) | 94.3 |
| 73: sig20.300.5.4 | 92.9 (86-97.1) | 91.4 (86.5-94.9) | 84.4 (76.2-90.6) | 96.3 (92.4-98.5) | 0.92 (0.89-0.95) | 91.9 |
| 74: sig.20.300.5.5 | 94.9 (88.6-98.3) | 93.4 (89-96.4) | 87.9 (80.1-93.4) | 97.4 (93.9-99.1) | 0.94 (0.91-0.97) | 93.9 |
| 75: sig.20.400.5.5 | 94.9 (88.6-98.3) | 93.9 (89.6-96.8) | 88.7 (81.1-94) | 97.4 (94-99.1) | 0.94 (0.92-0.97) | 94.3 |
| 76: sig.20.400.1.5 | 94.9 (88.6-98.3) | 93.9 (89.6-96.8) | 88.7 (81.1-94) | 97.4 (94-99.1) | 0.94 (0.92-0.97) | 94.3 |
| 77: sig.20.400.1.3 | 92.9 (86-97.1) | 91.4 (86.5-94.9) | 84.4 (76.2-90.6) | 96.3 (92.4-98.5) | 0.92 (0.89-0.95) | 91.9 |
| 78: sig.40.500.1.5 | 96 (90-98.9) | 93.9 (89.6-96.8) | 88.8 (81.2-94.1) | 97.9 (94.7-99.4) | 0.95 (0.92-0.98) | 94.6 |
| 79: sig.40.200.2.5 | 94.9 (88.6-98.3) | 92.9 (88.4-96.1) | 87 (79.2-92.7) | 97.3 (93.9-99.1) | 0.94 (0.91-0.97) | 93.6 |
| 80: sig.30.400.9.3 | 94.9 (88.6-98.3) | 93.4 (89-96.4) | 87.9 (80.1-93.4) | 97.4 (93.9-99.1) | 0.94 (0.91-0.97) | 93.9 |
| 81: tanh.10.400.5.1 | 98 (92.9-99.8) | 94.9 (90.9-97.5) | 90.7 (83.5-95.4) | 98.9 (96.2-99.9) | 0.97 (0.94-0.99) | 99.5 |
The names of the models refer to the characteristic of the model from left: Activation function, hidden layer size, epoch, momentum, learning rate. SE=Sensitivity; SP=Specificity; PPV=Positive predictive value; NPV=Negative predictive value; ROC=Receiver operating characteristics; Ac=Accuracy; CI=Confidence interval
Figure 1Radar plot for comparing the variable importance based on the optimal model. Normalized importance of the independent variable to predict BS mortality. AGE = Age category; MI.HIS = History of myocardial infraction; JOB = Employment status; PLACE = Place of residence; EDU = Education level; CVA.HIS = History of cerebrovascular accident; W.P = Waterpipe smoking; F.SM = Former smoking; P.SM = Passive smoking; SM = Smoking; HEA.HIS = History of heart disease; OCPUSE = Oral contraceptive pill use; PA = Physical activates; BP.HIS = History of blood pressure; HLP.HIS = History of hyperlipoproteinemia; DI.HIS = Diabetes; CVA.T = Cerebrovascular accident type