Literature DB >> 33087044

Interleukin 4 gene polymorphism (-589C/T) and the risk of asthma: a meta-analysis and met-regression based on 55 studies.

Ahmad Kousha1, Armita Mahdavi Gorabi2, Mehdi Forouzesh3, Mojgan Hosseini4, Markov Alexander5, Danyal Imani6, Bahman Razi7, Mohammad Javad Mousavi8,9, Saeed Aslani9, Haleh Mikaeili10.   

Abstract

BACKGROUND: Numerous investigations have previously evaluated the association of interleukin (IL) 4 gene polymorphisms and the risk of asthma, conferring inconsistent results. To resolve the incongruent outcomes yielded from different single studies, we conducted the most up-to-date meta-analysis of IL4 gene -589C/T (rs2243250) polymorphism and susceptibility to asthma.
METHODS: A systematic literature search was performed in ISI web of science, Scopus, Medline/PubMed databases prior to September 2020, and the pooled odds ratio (OR) and their corresponding 95% CI were calculated to determine the association strength.
RESULTS: Literature search led to retrieving of 49 publications (55 case-control studies) containing 9572 cases and 9881 controls. It was revealed that IL4 gene -589C/T polymorphism increased the risk of asthma across all genetic models, including dominant model (OR = 1.22), recessive model (OR = 1.17), allelic model (OR = 1.21), and TT vs. CC model (OR = 1.34), but not the CT vs. TT model. The subgroup analysis by age indicated that IL4 gene -589C/T polymorphism was significantly associated with asthma risk in both pediatrics and adults. Additionally, the subgroup analysis by ethnicity revealed significant association in Asian, American, and Europeans. Finally, subgroup analysis by East Asian and non-East Asian populations indicated significant associations.
CONCLUSIONS: The current meta-analysis revealed that IL4 gene -589C/T polymorphism was a susceptibility risk in both pediatrics and adults in the whole and different ethnic groups.

Entities:  

Keywords:  Asthma; Genetic susceptibility; Interleukin 4; Meta-analysis; Polymorphism

Year:  2020        PMID: 33087044      PMCID: PMC7579954          DOI: 10.1186/s12865-020-00384-7

Source DB:  PubMed          Journal:  BMC Immunol        ISSN: 1471-2172            Impact factor:   3.615


Background

Asthma is one of the most common atopic disorders of the respiratory tract, which results in wheezing, coughing, breathlessness, and bronchial obstruction [1]. The prevalence and incidence of asthma raised regularly and it estimated more than 300 million persons of the world are affected by this disease [2]. The main causes of asthma are not completely clear. However, is has been postulated that asthma is mediated by interactions between specific external stimulating factors, including pollutants, viral and bacterial infections, allergens, tobacco smokes, etc., and genetics of the patients. Additionally, increasing number of studies recommend that genetic factors play a critical role in the etiology of asthma by their interactions with the environmental elements [3, 4]. The heritability of asthma is estimated to be 35 to 95% [5]. Numerous studies have examined the correlation between genetic variations of pro and anti-inflammatory genes and susceptibility to asthma [6, 7]. In recent decades, single nucleotide polymorphisms (SNP) have become one of the frequently studied models of DNA variation in analyses of the association between genetics and susceptibility to disease [8, 9]. The role of immunological factors especially cytokines in modulating and controlling the inflammatory response of the respiratory tracts is essential in the evolution, progression, and exacerbations of asthma [10]. Interleukin (IL)-4 is a key ingredient of the immune system required in the regulation of response to an allergen through controlling the isotype switching of antibody in B lymphocytes to IgG and IgE class [11]. Elevated serum levels of IgE are suggestive of allergic reactions and resemble a high level of IL-4 mRNA assembly [12]. Moreover, it acts as a growth factor to facilitate the differentiation of T helper (Th) 2 cells and mast cells. These characteristics of IL-4 accentuate on the crucial roles of cytokines in the pathogenesis asthma [13, 14]. Additionally, IL4 gene polymorphisms, like promoter region (C + 33 T) SNP [15], and 3017 G/T SNP in intron 2 [16], have been associated with IgE levels, which might be involved in the pathogenesis of asthma. The IL4 gene is located on chromosome 5q31 [17]. The -589C/T (rs2243250) polymorphism has been recognized on upstream of the transcription initiation site [18]. It has been demonstrated that the binding of a transcription factor is enhanced by the appearance of the polymorphic T allele that may result in an overexpression of the IL4 gene and, thus, raising the power of any immunological response that dependents on IL-4 [19]. To date, many studies have examined the association between IL4 gene -589 C/T polymorphisms and the risk of asthma, but their outcomes have not been consistent. Therefore, we performed this meta-analysis to analyze the relationship between the -589C/T polymorphisms and susceptibility to asthma.

Methods

This study conducted in accordance with the Preferred Reporting Items for Systematic reviews and Meta-Analyses (PRISMA) statement including; literature review, study selection, inclusion and exclusion criteria, data extraction and quality assessment, and statistical analysis [20]. No ethics committee confirmation was necessary for this meta-analysis, which does not contain any studies with human participants or animals performed by any of the authors.

Literature review

A comprehensive search was performed in the ISI web of science, Scopus, Medline/PubMed databases to retrieve published articles prior to September 2020. The following main key words and Medical Subject Headings (Mesh) were searched: (“asthma” [Mesh] OR “asthmatic”) AND (“interleukin-4” OR “IL-4” OR “rs2243250”) AND (“single nucleotide polymorphism” OR “SNP” OR “polymorphisms” OR “mutation” OR “variation”). No restrictions were placed on language, sample size, population or publication date.

Study selection

The retrieved publications by primary literature search were imported into Endnote X8 software. The duplicate studies were removed and title and abstract of remain studies were reviewed by two investigators. Full-text verification was performed if we could not categorize studies based on title and abstract. Any disagreements during study selection was discussed and resolved by consensus.

Inclusion and exclusion criteria

The following inclusion criteria were used to distinguish eligible studies: i) studies with distinct case and control group evaluating the association between IL-4 C589T polymorphism and susceptibility to asthma; ii) studies with calculable or extractable data for odds ratio (OR) and 95% confidence intervals (CIs); iii) studies with sufficient data for alleles and genotypes in case and control group. The duplicates, reviews, book chapters, and meta-analysis were excluded. The application of these criteria results in 49 qualified studies for the meta-analysis.

Data extraction and quality assessment

Two of our authors independently and according to an extraction checklist extracted the following data: the first author, journal and year of publication, country of origin, ethnicity, number of subjects in the case and the control groups for each gender, mean or range of age, genotyping method, genotype counts in the case and the control group. The quality of each study was assessed using the Newcastle-Ottawa Scale (NOS) criteria [21]. Studies with scores 0–3, 4–6 or 7–9 were low, moderate or high-quality, respectively.

Statistical analysis

Statistical analyses were carried out using STATA (version 14.0; Stata Corporation, College Station, TX) and SPSS (version 23.0; SPSS, Inc. Chicago, IL). The strength of association between polymorphism and asthma susceptibility was estimated by odd ratios (ORs) and 95% confidence intervals (CIs) for the dominant model, recessive model, allele contrasts, and additive comparison. Heterogeneity among included studies was measured via Q statistics (P value< 0.1 considered statistically significant) and I2-test (I2 values of 25, 50 and 75% were described as low, moderate, and high heterogeneity, respectively). In the presence of heterogeneity random effect model (REM) was used, however fixed effect model (FEM) was applied in homogeneous condition [22, 23]. In order to assessed the predefined sources of heterogeneity among included studies, subgroup analysis and meta-regression analysis based on year of population, the continent of the study population, and genotyping method were performed. The genotypic frequency distribution in the controls was checked for consistency of the Hardy– Weinberg equilibrium (HWE). Furthermore, publication bias was computed by the Begg’s and Egger’s test and visual examination of the funnel plot (P value< 0.05 considered statistically significant) [24, 25]. Additionally, to calculate overall effect size in absence of each study, a sensitivity analysis was conducted.

Results

Search results and characteristics of the selected studies

Our primary search retrieved 2121 potential articles. After removing of duplicate articles (n = 301), 1820 articles remain for abstract and full-text screening. Of 1820 articles, 1612 were excluded base on title and abstract and 159 articles based on full-text reading. Ultimately 49 publications with 9579 cases and 9881 controls met the inclusion criteria and their data were extracted for meta-analysis. Among these 49 publications, four of them, including Basehore et al. [16], Donfack et al. [26], Zhang et al. [27], and Baye et al. [28] examined two or three different populations with separate case and control; therefore, we assumed them as 9 case-control studies collectively (55 studies). The detailed information on study selection process is illustrated in Fig. 1, Tables 1, and 2.
Fig. 1

Flow diagram of study selection process

Table 1

Characteristics of studies included in meta-analysis of overall asthma

Study authorYearCountryEthnicity 1 (Continent)Ethnicity 2Ethnicity 3Age groupTotal cases/controlGenotyping methodQuality Score
Walley et al. [29]1996UKEuropenon East-AsianCaucasianPediatric124 / 59PCR-RFLP6
Hijazi et al. [30]2000KuwaitAsianon East-AsianArabMixed84 / 100PCR-RFLP6
Sandford et al. [31]2000New ZealandEuropenon East-AsianCaucasianAdult233 / 143PCR-RFLP7
Takabayashi et al. [32]2000JapanAsiaEast-AsianCaucasianPediatric100 / 100PCR-RFLP6
Hakonarson et al. [33]2001IcelandEuropenon East-AsianCaucasianMixed94 / 94PCR6
Cui et al. [34]2003ChinaAsiaEast-AsianCaucasianMixed241 / 175PCR-RFLP7
Basehore et al. (i) [16]2004USAAmericanon East-AsianAfrican AmericanAdult233 / 245PCR7
Basehore et al. (ii) [16]2004USAAmericanon East-AsianAfrican AmericanAdult168 / 269PCR7
Basehore et al. (iii) [16]2004USAAmericanon East-AsianAfrican AmericanAdult116 / 130PCR6
Lee et al. [35]2004KoreaAsiaEast-AsianCaucasianPediatric254 / 100PCR-RFLP6
Park et al. [36]2004KoreaAsiaEast-AsianCaucasianMixed532 / 170SNaPshot8
Wang et al. [37]2004ChinaAsiaEast-AsianCaucasianAdult93 / 62PCR-RFLP6
Adjers et al. [38]2004FinlandEuropenon East-AsianCaucasianAdult243 / 401PCR-RFLP7
Donfack et al. (i) [26]2005USAAmericanon East-AsianAfrican AmericanMixed126/ 205LAS6
Donfack et al. (ii) [26]2005USAAmericanon East-AsianAfrican AmericanMixed205 / 183LAS7
Zhang et al. (i) [27]2005ChinaAsiaEast-AsianCaucasianAdult152 / 157PCR-RFLP6
Zhang et al. (ii) [27]2005MalaysiaAsiaEast-AsianCaucasianAdult76 / 100PCR-RFLP6
Zhang et al. (iii) [27]2005IndiaAsianon East-AsianCaucasianAdult87 / 103PCR-RFLP6
Gervaziev et al. [39]2006RussiaEuropenon East-AsianCaucasianAdult109 / 68PCR-RFLP6
Schubert et al. [40]2006GermanyEuropenon East-AsianCaucasianPediatric231 / 270PCR-RFLP7
Kabesch et al. [41]2006GermanyEuropenon East-AsianCaucasianPediatric73 / 773PCR-RFLP6
Battle et al. [42]2007USAAmericanon East-AsianAfrican AmericanMixed255 / 175PCR-RFLP6
Hosseini-Farahabadi et al. [43]2007IranAsianon East-AsianCaucasianAdult30 / 50PCR-RFLP5
Kamali-Sarvestani et al. [44]2007IranAsianon East-AsianCaucasianAdult149 / 112PCR-RFLP6
Chiang et al. [45]2007ChinaAsiaEast-AsianCaucasianAdult167 / 111PCR-RFLP6
Mak et al. [46]2007ChinaAsiaEast-AsianCaucasianAdult289 / 292PCR-RFLP7
Attab et al. [47]2008JordanAsianon East-AsianArabPediatric40 / 40PCR-RFLP5
De Faria et al. [48]2008BrazilAmericanon East-AsianCaucasianPediatric88 / 202PCR-RFLP6
Jiang et al. [49]2009ChinaAsiaEast-AsianCaucasianAdult13 / 13PCR-RFLP5
Amirzargar et al. [50]2009IranAsianon East-AsianCaucasianMixed59 / 139PCR-RFLP6
Daley et al. [51]2009AustraliaOceanianon East-AsianCaucasianMixed644 / 751Illumina Bead array system8
Haller et al. [52]2009USAAmericanon East-AsianAfrican AmericanAdult72 / 70PCR-RFLP6
Rad et al. [53]2010IranAsianon East-AsianCaucasianAdult64 / 65PCR-RFLP6
Wu et al. [54]2010ChinaAsiaEast-AsianCaucasianPediatric252 / 227PCR-RFLP7
Beghe et al. [55]2010UK and ItalyEuropenon East-AsianCaucasianMixed299 / 176PCR-RFLP7
Bijanzadeh et al. [56]2010IndiaAsianon East-AsianCaucasianMixed100 / 50PCR-RFLP6
Fance et al. [57]2010ChinaAsiaEast-AsianCaucasianAdult62 / 30PCR-RFLP6
Baye et al. (i) [28]2011USAAmericanon East-AsianAfrican AmericanPediatric413 / 298Illumina GoldenGate Assay system7
Baye et al. (ii) [28]2011USAAmericanon East-AsianAfrican AmericanPediatric315 / 51Illumina GoldenGate Assay system6
Daneshmandi et al. [58]2011IranAsianon East-AsianCaucasianAdult81 / 124PCR-RFLP7
Huang et al. [59]2011ChinaAsiaEast-AsianCaucasianPediatric100 / 122PCR-RFLP6
Hwang et al. [60]2012ChinaAsiaEast-AsianCaucasianPediatric188 / 376PCR-RFLP7
Chiang et al. [61]2012ChinaAsiaEast-AsianCaucasianAdult452 / 106PCR-RFLP6
Micheal et al. [62]2013PakistanAsianon East-AsianCaucasianMixed108 / 120PCR-RFLP6
Ricciardolo et al. [63]2013ItalyEuropenon East-AsianCaucasianMixed57 / 124PCR-SSP6
Smolnikova et al. [64]2013RussiaEuropenon East-AsianCaucasianMixed64 / 50PCR-RFLP6
Li et al. [65]2014ChinaAsiaEast-AsianCaucasianPediatric491 / 503PCR-LDR7
Wang et al. [66]2015ChinaAsiaEast-AsianCaucasianMixed392 / 849Mass array7
Dahmani et al. [67]2016AlgeriaAfricanon East-AsianArabAdult44 / 19PCR-RFLP6
Li et al. [68]2016ChinaAsiaEast-AsianCaucasianPediatric317 /351PCR and Sequencing7
Narozna et al. [69]2016PolandEuropenon East-AsianCaucasianMixed177 / 189Taq Man7
Zhang et al. [68]2016ChinaAsiaEast-AsianCaucasianPediatric38 / 35PCR and Sequencing6
Hussein et al. [70]2017IraqAsianon East-AsianArabMixed48 / 25ARMS-PCR6
Abood et al. [71]2018IraqAsianon East-AsianArabMixed100 / 100AS-PCR6
Zhang et al. [72]2019ChinaAsiaEast-AsianCaucasianPediatric37 / 29PCR and Sequencing5
Table 2

Distribution of genotype and allele among asthma patients and controls

Study authorAsthma casesHealthy controlP-HWEMAF
CCCTTTCTCCCTTTCT
Walley et al. [29]565513167813123585330/80/72
Hijazi et al. [30]525543513393160491510/10/245
Sandford et al. [31]14678937096100412241450/330/842
Takabayashi et al. [32]6435155145103951591410/530/295
Hakonarson et al. [33]732011662267252159290/850/845
Cui et al. [34]1189141111371952114702800/340/2
Basehore et al. (i) [16]15372837888181595421690/940/859
Basehore et al. (ii) [16]227769121215291191211773610/970/329
Basehore et al. (iii) [16]43551814191555916169910/970/65
Lee et al. [35]9771689541332968351650/960/175
Park et al. [36]19164349202862754109682720/920/2
Wang et al. [37]2942221008621261568560/220/548
Adjers et al. [38]10610334315171189164485422600/180/675
Donfack et al. (i) [26]8534720448144556343670/780/836
Donfack et al. (ii) [26]2582981322782482771302360/760/355
Zhang et al. (i) [27]44710155249345109512630/50/162
Zhang et al. (ii) [27]1135305795164341751250/40/375
Zhang et al. (iii) [27]503161314366307162440/170/786
Gervaziev et al. [39]1675181071111843779570/010/58
Schubert et al. [40]143781036498189747452880/930/837
Kabesch et al. [41]42292113335641882113162300/260/851
Battle et al. [42]281131141693411977791152350/970/328
Hosseini-Farahabadi et al. [43]178542183812088120/330/88
Kamali-Sarvestani et al. [44]139642841493181204200/90/91
Chiang et al. [45]1191472131373470481740/310/216
Mak et al. [46]159517912545319871861254590/050/214
Attab et al. [47]319071933707370/540/912
De Faria et al. [48]384191175967108272421620/10/599
Jiang et al. [49]08581819311150/130/423
Amirzargar et al. [50]05905959101290149129< 0.0010/535
Daley et al. [51]4761551311071815491861612842180/950/854
Haller et al. [52]63036421027313245950/890/321
Rad et al. [53]461801101842230107230/080/823
Wu et al. [54]6831639540911841321063480/610/233
Beghe et al. [55]23263452771136373309430/790/877
Bijanzadeh et al. [56]9244188124811973< 0.0010/97
Fance et al. [57]38131189352712555< 0.0010/916
Baye et al. (i) [28]26713016664162233614527690/990/884
Baye et al. (ii) [28]3514014021042012251449530/890/48
Daneshmandi et al. [58]631531412194264214340/20/862
Huang et al. [59]119802117944375511930/460/209
Hwang et al. [60]1511365332312892751136390/150/15
Chiang et al. [61]1311032913676873465481640/380/226
Micheal et al. [62]2663191151013184514694< 0.0010/608
Ricciardolo et al. [63]35193892510912323018< 0.0010/927
Smolnikova et al. [64]36280100283911089110/380/89
Li et al. [65]17150324184798211443381868200/260/184
Wang et al. [66]5017716527750710441233362010780/170/365
Dahmani et al. [67]1319124543611223150/350/605
Li et al. [68]11202052244101380213276426< 0.0010/393
Narozna et al. [69]11755528965133533319590/370/843
Zhang et al. [68]8111927491713547230/340/671
Hussein et al. [70]4251897813429210/730/58
Abood et al. [71]66171714951790310496< 0.0010/52
Zhang et al. [72]7131727471115337210/510/637

P-HWE p-value for Hardy–Weinberg equilibrium, MAF minor allele frequency of control group

Flow diagram of study selection process Characteristics of studies included in meta-analysis of overall asthma Distribution of genotype and allele among asthma patients and controls P-HWE p-value for Hardy–Weinberg equilibrium, MAF minor allele frequency of control group

Meta-analysis of IL-4 SNP (C-589 T) and the risk of asthma

Overall, 55 studies with 9572 cases and 9881 controls included in quantitative analysis of the association between IL-4 gene -589C/T polymorphism and the risk of asthma. Of those, 11 articles were conducted in European countries [29, 31, 33, 38–41, 55, 63, 64, 69], 32 articles were in Asian countries [27, 30, 32, 34–37, 43–46, 49, 50, 53, 54, 56–62, 65, 66, 68, 70–73], 10 articles in American countries [16, 26, 28, 42, 48, 52] and one article in each Algeria [67] and Australia country [51]. The analysis of overall population revealed the significant positive association between IL4 gene -589C/T polymorphism and the risk of asthma across all genetic models; including dominant model (OR = 1.22, 95% CI = 1.04–1.44, P = 0.01, REM), recessive model (OR = 1.17, 95% CI = 1.08–1.27, P < 0.001, FEM), allelic model (OR = 1.21, 95% CI = 1.09–1.33, P < 0.001, REM), and TT vs. CC model (OR = 1.34, 95% CI = 1.18–1.52, P < 0.001, FEM), except CT vs. TT model (OR = 1.13, 95% CI = 0.95–1.34, P = 0.17, REM) (Fig. 2). Additionally, along with subgroup analysis based on age we stratified the analysis by ethnicity in three conditions.
Fig. 2

Pooled OR and 95% CI of individual studies and pooled data for the association between Il-4 C589T polymorphism and asthma risk in; a allelic model, b recessive Model

Pooled OR and 95% CI of individual studies and pooled data for the association between Il-4 C589T polymorphism and asthma risk in; a allelic model, b recessive Model

Subgroup analysis by age

We stratified eligible articles into three groups including: pediatrics (16 articles), adults (21 articles) and mixed (cover both range;18 articles). The results highlighted a predisposing role of IL4 gene -589C/T polymorphism for the asthma risk in pediatrics and adults under all genotype models. However, no significant association was detected in mixed group (Table 3, Fig. 3).
Table 3

Main results of pooled ORs in meta-analysis of IL-4 gene polymorphisms in asthmatic patients

SubgroupSample sizeTest of associationTest of heterogeneityTest of publication bias (Begg’s test)Test of publication bias (Egger’s test)
Genetic modelCase/ControlOR95% CI (p-value)I2 (%)PzPtP
OverallDominant model9579 / 98811.221.04–1.44 (0.01)69.7< 0.001- 1.330.24- 1.170.39
Recessive model9579 / 98811.171.08–1.27 (< 0.001)48.5< 0.001−1.380.16−0.600.55
Allelic model9579 / 98811.211.09–1.33 (< 0.001)71.1< 0.001− 1.050.41−1.820.07
TT vs. CC9579 / 98811.341.18–1.52 (< 0.001)30.50.02−1.250.24−1.900.65
CT vs. CC9579 / 98811.130.95–1.34 (0.17)68.7< 0.001−2.060.33−1.730.09
Age groups
PediatricsDominant model3061 / 35361.541.24–1.92 (< 0.001)410.04− 1.930.05−1.630.23
Recessive model3061 / 35361.201.05–1.37 (< 0.001)58.3< 0.001−0.360.71−1.140.27
Allelic model3061 / 35361.371.16–1.63 (< 0.001)68< 0.001−1.530.12− 1.990.06
TT vs. CC3061 / 35361.511.22–1.87 (< 0.001)51.60.01−1.440.15−1.470.24
CT vs. CC3061 / 35361.491.23–1.81 (< 0.001)10.60.33−1.920.05−1.220.42
AdultsDominant model2933 / 26701.231.01–1.51 (0.04)35.20.066−2.100.03−1.860.08
Recessive model2933 / 26701.211.04–1.40 (0.01)460.01−0.910.36−0.710.48
Allelic model2933 / 26701.241.05–1.47 (< 0.001)63.8< 0.001−0.970.33−1.450.16
TT vs. CC2933 / 26701.371.09–1.72 (< 0.001)50.39−1.010.47−1.770.19
CT vs. CC2933 / 26701.150.96–1.39 (0.13)230.17−2.130.03−1.560.13
MixedDominant model3585 / 36750.920.65–1.32 (0.65)83.6< 0.001−0.090.92− 1.050.31
Recessive model3585 / 36751.120.97–1.28 (0.11)45.40.02−0.410.680.390.70
Allelic model3585 / 36751.030.85–1.24 (0.78)76.3< 0.001−0.720.470.020.98
TT vs. CC3585 / 36751.140.91–1.42 (0.24)20.80.21−0.180.85−0.280.87
CT vs. CC3585 / 36750.870.59–1.28 (0.48)84.9< 0.00101−1.110.28
Ethnicity-1 (Continent)
AsiaDominant model5196 / 49361.150.84–1.56 (0.39)75.6< 0.001−1.860.06−1.440.20
Recessive model5196 / 49361.161.06–1.28 (< 0.001)65< 0.001−1.620.10−0.600.55
Allelic model5196 / 49361.171–1.37 (0.04)76.7< 0.001−1.720.08−1.040.30
TT vs. CC5196 / 49361.341.13–1.58 (< 0.001)42.70.01−1.480.13−1.150.40
CT vs. CC5196 / 493610.70–1.42 (0.97)75.1< 0.001−20.04−1.420.20
EuropeDominant model1704 / 23471.461.15–1.85 (< 0.001)56.90.0101−0.700.49
Recessive model1704 / 23471.350.98–1.86 (0.06)00.94− 1.580.11−1.910.08
Allelic model1704 / 23471.341.12–1.61 (< 0.001)510.02−1.030.30−1.500.16
TT vs. CC1704 / 23471.531.10–2.14 (0.01)00.800.160.87−0.870.40
CT vs. CC1704 / 23471.441.13–1.83 (< 0.001)55.60.010.780.430.330.74
AmericaDominant model1991 / 18281.220.95–1.58 (0.11)54.50.01−1.330.27−2.050.07
Recessive model1991 / 18281.150.96–1.39 (0.12)24.30.22−1.340.180.990.35
Allelic model1991 / 18281.190.99–1.44 (0.06)64.8< 0.001− 0.980.32−0.480.64
TT vs. CC1991 / 18281.270.98–1.64 (0.07)43.70.06− 1.520.12−1.910.09
CT vs. CC1991 / 18281.180.94–1.48 (0.15)39.30.09−1.520.12−1.940.08
Ethnicity-2
East-AsianDominant model4246 / 39081.431.14–1.79 (< 0.001)26.30.14−1.080.281.530.29
Recessive model4246 / 39081.141.03–1.26 (< 0.001)66.6< 0.001−1.020.27−1.510.36
Allelic model4246 / 39081.291.10–1.52 (< 0.001)72< 0.001−1.790. 58−3.100.06
TT vs. CC4246 / 39081.331.11–1.59 (< 0.001)41.80.02−1.270.29−1.390.31
CT vs. CC4246 / 39081.241.00–1.53 (0.04)00.74−1.890.68−1.710.10
Non-East-AsianDominant model5333 / 59731.100.90–1.36 (0.35)77.4< 0.001−0.800.42−1.180.35
Recessive model5333 / 59731.251.08–1.45 (< 0.001)21.90.140.590.550.730.47
Allelic model5333 / 59731.151–1.32 (0.04)71.5< 0.001−1.050.48−1.820.07
TT vs. CC5333 / 59731.341.12–1.61 (< 0.001)240.11−0.370.70−1.040.30
CT vs. CC5333 / 59731.030.83–1.28 (0.78)77.9< 0.001−1.160.24−1.930.06
Ethnicity 3
CaucasianDominant model7360 / 79711.301.12–1.51 (< 0.001)49.2< 0.001−1.040.48−1.510.18
Recessive model7360 / 79711.161.06–1.27 (< 0.001)49.7< 0.001−1.310.24−2.770.09
Allelic model7360 / 79711.251.12–1.39 (< 0.001)65< 0.0011.400.17−1.120.38
TT vs. CC7360 / 79711.341.16–1.56 (< 0.001)24.90.09−1.520.16−1.340.29
CT vs. CC7360 / 79711.221.05–1.42 (< 0.001)39.6< 0.001−1.540.12−1.800.08
ArabDominant model316 / 2840.360.07–1.88 (0.22)91.5< 0.0010.680.49−0.170.83
Recessive model316 / 2841.530.27–1.48 (0.09)87.4< 0.00101−1.670.19
Allelic model316 / 2840.630.67–3.68 (0.29)85.4< 0.0010.490.62−0.110.92
TT vs. CC316 / 2840.930.43–1.99 (0.85)66.60.020.680.491.250.33
CT vs. CC316 / 2840.290.05–1.84 (0.19)92.3< 0.00101−0.710.55
African-AmericanDominant model1903 / 16261.341.07–1.67 (0.01)35.30.13−1.670.091.970.27
Recessive model1903 / 16261.180.98–1.43 (0.07)24.70.220.630.531.110.30
Allelic model1903 / 16261.251.04–1.50 (0.01)58.90.01−1.460.14−0.810.44
TT vs. CC1903 / 16261.371.04–1.80 (0.02)36.20.12−1.670.09−1.440.40
CT vs. CC1903 / 16261.301.06–1.58 (0.01)13.90.31−1.670.09−1.460.41
Fig. 3

Pooled odds ratio and 95% confidence interval of individual studies and pooled data for the association between IL-4 C589T polymorphism and asthma risk in different subgroups for; a dominant model [age subgroup], b dominant model [continent]

Main results of pooled ORs in meta-analysis of IL-4 gene polymorphisms in asthmatic patients Pooled odds ratio and 95% confidence interval of individual studies and pooled data for the association between IL-4 C589T polymorphism and asthma risk in different subgroups for; a dominant model [age subgroup], b dominant model [continent]

Subgroup analysis by ethnicity 1 (continent)

In this subgroup we categorized studies by their continent: including Asia (32 articles), Europe (11 articles), America (10 articles), Africa (1 article), and Oceania (1 article). Since there was only one study for each one of the African and Australian population, these studies were excluded from the analysis. The results indicated that presence of IL4 gene -589C/T SNP in Asian population increased susceptibility of asthma across all genotype models except dominant model (OR = 1.15, 95% CI = 0.84–1.56, P = 0. 39, REM) and CT vs. CC model (OR = 1, 95% CI = 0.70–1.42, P = 0. 97, REM). Moreover, in contrast with effect of IL4 gene -589C/T SNP on the risk of asthma in American populations, a significant positive association was detected in European population thorough dominant model (OR = 1.46, 95% CI = 1.15–1.85, P < 0.001, REM), allelic model (OR = 1.34, 95% CI = 1.12–1.61, P < 0.001, REM), TT vs. CC model (OR = 1.53, 95% CI = 1.10–2.14, P = 0.01, FEM), and CT vs.CC model (OR = 1.44, 95% CI = 1.13–1.83, P < 0.001, REM) (Table 3, Fig. 3).

Subgroup analysis by ethnicity 2 (east and non-east Asian)

The subgroup analysis according to East Asian (20 articles) and non-East Asian (35 articles) title revealed the significant association between IL4 gene -589C/T polymorphism and the risk of asthma across in all genotype models of East Asians and three genotype models of non-East Asian including; recessive model (OR = 1.25, 95% CI = 1.08–1.45, P < 0.001, FEM), allelic model (OR = 1.15, 95% CI = 1–1.32, P = 0.04, REM), TT vs. CC model (OR = 1.34, 95% CI = 1.12–1.61, P < 0.001, FEM) (Table 3, Fig. 4).
Fig. 4

Pooled odds ratio and 95% confidence interval of individual studies and pooled data for the association between IL-4 C589T polymorphism and asthma risk in different subgroups for; a dominant model [East and non-East Asian], b dominant model [ethnicity]

Pooled odds ratio and 95% confidence interval of individual studies and pooled data for the association between IL-4 C589T polymorphism and asthma risk in different subgroups for; a dominant model [East and non-East Asian], b dominant model [ethnicity]

Subgroup analysis by ethnicity 3

Finally, subgroup analysis of eligible articles according ethnicity including Caucasians (41 articles), African-Americans (9 articles), and Arabs (5 articles) showed that there was no significant association between IL4 gene -589C/T SNP and asthma risk in Arab population. Also, except recessive model (OR = 1.18, 95% CI = 0.98–1.43, P = 0.07, FEM) other genotype models in African-American population were significant including dominant model (OR = 1.34, 95% CI = 1.07–1.67, P = 0.01, FEM), allelic model (OR = 1.25, 95% CI = 1.04–1.50, P = 0.01, REM), TT vs. CC model (OR = 1.37, 95% CI = 1.04–1.80, P = 0.02, FEM), and CT vs. CC model (OR = 1.30, 95% CI = 1.06–1.58, P = 0.01, FEM). Conversely, all genotype models were significant in Caucasians and presence of IL4 gene -589C/T SNP increase risk of asthma (Table 3, Fig. 4).

Meta-regression analyses

Meta-regression analyses were performed to explore potential sources of heterogeneity among included studies (Table 4). The findings indicated that none of the expected heterogeneity parameter were the source of heterogeneity (Fig. 5).
Table 4

Meta-regression analyses of potential source of heterogeneity

Heterogeneity FactorsCoefficientSETP-value95% CI
ULLL
Publication YearDominant model0.0350.0410.850.40−0.0481.119
Recessive model0.1400.0363.810.07−0.0660.213
Allelic model0.0350.0221.580.11−0.0090.080
TT vs. CC0.1230.0641.910.06−0.0060.254
CT vs. CC0.0200.0350.580.56−0.0500.090
continentDominant model−0.2380.265−0.900.37−0.7720.294
Recessive model0.0220.2740.080.93−0.5300.574
Allelic model−0.1160.146−0.790.43−0.4100.177
AA vs. CC−0.0960.435−0.220.82−0.9730.780
CA vs. CC−0.2650.209−1.270.21−0.6850.154
Genotyping methodsDominant model−0.1370.241−0.570.57−0.6210.346
Recessive model0.3820.2321.650.10−0.0840.849
Allelic model0.0390.1300.300.76−0.2210.300
TT vs. CC0.0560.3880.140.88−0.7260.838
CT vs. CC−0.1140.199−0.570.57−0.5150.287
Fig. 5

Meta-regression plots of the association between IL-4 C589T polymorphism and risk of asthma based on; a Continent (dominant), b Genotyping methods (recessive), c Publication year (Allelic)

Meta-regression analyses of potential source of heterogeneity Meta-regression plots of the association between IL-4 C589T polymorphism and risk of asthma based on; a Continent (dominant), b Genotyping methods (recessive), c Publication year (Allelic)

Publication bias

To check existence of publication, Egger’s linear regression and Begg’s funnel plot test were used. The shape of funnel plot did not disclose obvious asymmetry under all genotype model of the IL4 gene -589C/T polymorphism (Fig. 6).
Fig. 6

Begg’s funnel plot for publication bias test. Dominant model C598T. Each point represents a separate study for the indicated association

Begg’s funnel plot for publication bias test. Dominant model C598T. Each point represents a separate study for the indicated association

Sensitivity analysis

The impact of individual study on pooled OR was evaluated by sequential omission of each studies. The result showed that no individual study significantly affected the pooled ORs under all genotype models of the IL4 gene -589C/T polymorphism (Fig. 7).
Fig. 7

Sensitivity analysis in present meta-analysis investigates the single nucleotide polymorphisms of IL-4 C589T contribute to risk for asthma

Sensitivity analysis in present meta-analysis investigates the single nucleotide polymorphisms of IL-4 C589T contribute to risk for asthma

Discussion

To date, several individual case-control replication studies have attempted to divulge the association of IL4 gene -589C/T polymorphism and risk of asthma. Due to some differences, however, these disperse investigation demonstrated incongruous reports. The differences in the race of study subjects, diversity in the diagnostic criteria of the patients, limited sample sizes may be the cause of such inconsistent results [74]. On the other hand, meta-analysis is a tool that has the potential to solve the problem of inconsistency by removing the confining issues of insufficient statistical power in the individual studies. Therefore, to resolve the mentioned confining factors about the IL4 gene -589C/T polymorphism, the present most up-to-date meta-analysis was conducted to determine a bona fide estimation of the association between IL4 gene -589C/T polymorphism and susceptibility to asthma. Our analysis indicated that this SNP was associated with increased risk of asthma in the overall population as well as during subgroup analysis by age groups and ethnicity/continent. Asthma is a complicated pulmonary disease, characterized by airway hyperresponsiveness, airway inflammation, and airway remodeling [75, 76]. During asthma, there is a hyperactivity of Th2 responses, in which the cytokines of the type 2 immunity, such as IL-4, IL-5, and IL-13 promote the harmful inflammatory events in the airways. Studies have reported that local administration of IL-4 gene plasmids prior to antigen challenge could stimulate the airway hyperresponsiveness and accumulation of eosinophils in mice [77]. This phenotype of asthma is commonly referred to “eosinophilic” asthma. On the other side, “noneosinophilic” asthma is characterized by low frequency of eosinophils in the involved sites, but other inflammatory cells are dominant in the effector phase, such as neutrophils, mixed granulocyte inflammatory cells, or even little number of inflammatory cells, called paucigranulocytic inflammation. Th17 mediated IL-17 axis and lack of significant Th2/Th17 inflammation have been attributed to the noneosinophilic asthma [78]. Among the SNPs in the IL4 gene, the -589C/T (rs2243250) polymorphism has been widely investigated in susceptibility to asthma. It has been shown that the T allele of this SNP leads to increased affinity of the binding of transcription factors in comparison to the C allele, leading to overexpression of IL4 mRNA [79, 80]. As a consequence, it is a biological justification that IL4 gene −589C/T SNP impresses the IL-4 expression and, hence, could affect the asthma susceptibility. Previously, three meta-analysis studies have attempted to disclose the association of IL4 gene −589C/T SNP with the risk of asthma. Wang et al. in 2012 indicated that the T allele of IL4 gene −589C/T SNP increased the risk of asthma (OR = 1.12). Basically, individuals carrying the T allele had a 24% increased risk of asthma in comparison to the CC homozygote model. Subgroup analysis revealed the association of this polymorphism in the Caucasians [81]. In addition, Nie et al. in 2013 included 40 studies involving 7345 cases and 7819 controls in their meta-analysis [18]. This meta-analysis indicated that TT vs. CC (OR = 1.40) and CT vs. CC (OR = 1.22) models were significantly associated with increased risk of asthma. In the subgroup analysis by ethnicity, significant associations were found among Asians and Caucasians, but not in the African-Americans. In addition, the subgroup analysis by atopic status revealed no significant association among atopic asthma patients and non-atopic asthma patients. On the other side, Zhang et al. [75] by evaluating pediatric asthma risk by evolving 17 case-control studies (15 publications) containing 3427 cases and 4247 controls revealed that IL4 -589C/T polymorphism was associated with increased risk of asthma in pediatrics. Furthermore, the subgroup analyses by ethnicity, indicated significant association in Caucasians and Asians. Our analysis was performed on 55 case-control studies containing 9572 cases and 9881 controls. It was observed that IL4 gene -589C/T polymorphism increased the risk of asthma across all genetic models, including dominant model (OR = 1.22), recessive model (OR = 1.17), allelic model (OR = 1.21), and TT vs. CC model (OR = 1.34), but not the CT vs. TT model. Furthermore, subgroup analysis by age indicated that IL4 gene -589C/T polymorphism was significantly associated with asthma risk in both pediatrics and adults. The subgroup analysis by ethnicity revealed significant association in Asian, American, and Europeans. Finally, subgroup analysis by East Asian and non-East Asian populations indicated significant associations. This meta-analysis bears some limitations and caveats. First, the analysis was according to crude estimation of IL4 gene -589C/T polymorphism association with asthma susceptibility, regardless of the effect of confounding factors, like age, sex, environmental factors, and contribution of other genes in LD with IL4 gene. Second, we did not analyze other genes that could be contributing in understanding of cytokine involvement in the susceptibility to asthma.

Conclusion

All in all, here we carried out the most up-to-date analysis of the IL4 gene 589C/T polymorphism and asthma risk prior to September 2020. Our meta-analysis further confirmed some results of the previously performed meta-analysis, while rejected some of them. In a whole, IL4 gene -589C/T polymorphism increased the risk of asthma across all genetic models. Moreover, the subgroup analysis by age indicated that IL4 gene -589C/T polymorphism was significantly associated with asthma risk in both pediatrics and adults. Also, the subgroup analysis by ethnicity revealed significant association in Asian, American, and Europeans. Ultimately, subgroup analysis by East Asian and non-East Asian populations indicated significant associations.
  65 in total

1.  Recent advances in the genetic epidemiology and molecular genetics of substance use disorders.

Authors:  Kenneth S Kendler; Xiangning Chen; Danielle Dick; Hermine Maes; Nathan Gillespie; Michael C Neale; Brien Riley
Journal:  Nat Neurosci       Date:  2012-01-26       Impact factor: 24.884

Review 2.  A review of asthma genetics: gene expression studies and recent candidates.

Authors:  Giovanni Malerba; Pier F Pignatti
Journal:  J Appl Genet       Date:  2005       Impact factor: 3.240

Review 3.  Etiology of asthma exacerbations.

Authors:  Annemarie Sykes; Sebastian L Johnston
Journal:  J Allergy Clin Immunol       Date:  2008-10       Impact factor: 10.793

Review 4.  Cytokine and anti-cytokine therapy in asthma: ready for the clinic?

Authors:  D Desai; C Brightling
Journal:  Clin Exp Immunol       Date:  2009-10       Impact factor: 4.330

Review 5.  Asthma: epidemiology, etiology and risk factors.

Authors:  Padmaja Subbarao; Piush J Mandhane; Malcolm R Sears
Journal:  CMAJ       Date:  2009-09-14       Impact factor: 8.262

Review 6.  The genetics of asthma and allergic disease: a 21st century perspective.

Authors:  Carole Ober; Tsung-Chieh Yao
Journal:  Immunol Rev       Date:  2011-07       Impact factor: 12.988

Review 7.  Uncontrolled asthma: a review of the prevalence, disease burden and options for treatment.

Authors:  Stephen P Peters; Gary Ferguson; Yamo Deniz; Colin Reisner
Journal:  Respir Med       Date:  2006-05-18       Impact factor: 3.415

Review 8.  Triggers of IgE class switching and allergy development.

Authors:  Lars K Poulsen; Lone Hummelshoj
Journal:  Ann Med       Date:  2007-07-06       Impact factor: 4.709

9.  Vitamin D receptor gene polymorphism and susceptibility to asthma: Meta-analysis based on 17 case-control studies.

Authors:  Masoud Hassanzadeh Makoui; Danyal Imani; Morteza Motallebnezhad; Maryam Azimi; Bahman Razi
Journal:  Ann Allergy Asthma Immunol       Date:  2019-10-22       Impact factor: 6.347

Review 10.  A comprehensive review of genetic association studies.

Authors:  Joel N Hirschhorn; Kirk Lohmueller; Edward Byrne; Kurt Hirschhorn
Journal:  Genet Med       Date:  2002 Mar-Apr       Impact factor: 8.822

View more
  2 in total

1.  Polymorphisms in Human IL4, IL10, and TNF Genes Are Associated with an Increased Risk of Developing NSAID-Exacerbated Respiratory Disease.

Authors:  María Luisa Reigada-Rivera; Catalina Sanz Lozano; Esther Moreno Rodilla; Asunción García-Sánchez; Virginia García-Solaesa; Félix Lorente Toledano; Ignacio Dávila González; María Isidoro-García
Journal:  Genes (Basel)       Date:  2022-03-28       Impact factor: 4.141

2.  Polymorphic Variants of Interleukin-13 R130Q and Interleukin-4 T589C in Children with and without Cow's Milk Allergy.

Authors:  Oksana Matsyura; Lesya Besh; Olena Kens; Dana Kosorinová; Katarína Volkovová; Sandor G Vari
Journal:  Life (Basel)       Date:  2022-04-19
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.