Literature DB >> 33086383

Grouping of UVCB substances with new approach methodologies (NAMs) data.

John S House1,2, Fabian A Grimm3,4, William D Klaren3,5, Abigail Dalzell6, Srikeerthana Kuchi7,8, Shu-Dong Zhang7, Klaus Lenz9, Peter J Boogaard10,11, Hans B Ketelslegers11, Timothy W Gant6, Fred A Wright1, Ivan Rusyn3.   

Abstract

One of the most challenging areas in regulatory science is assessment of the substances known as UVCB (unknown or variable composition, complex reaction products and biological materials). Because the inherent complexity and variability of UVCBs present considerable challenges for establishing sufficient substance similarity based on chemical characteristics or other data, we hypothesized that new approach methodologies (NAMs), including in vitro test-derived biological activity signatures to characterize substance similarity, could be used to support grouping of UVCBs. We tested 141 petroleum substances as representative UVCBs in a compendium of 15 human cell types representing a variety of tissues. Petroleum substances were assayed in dilution series to derive point of departure estimates for each cell type and phenotype. Extensive quality control measures were taken to ensure that only high-confidence in vitro data were used to determine whether current groupings of these petroleum substances, based largely on the manufacturing process and physico-chemical properties, are justifiable. We found that bioactivity data-based groupings of petroleum substances were generally consistent with the manufacturing class-based categories. We also showed that these data, especially bioactivity from human induced pluripotent stem cell (iPSC)-derived and primary cells, can be used to rank substances in a manner highly concordant with their expected in vivo hazard potential based on their chemical compositional profile. Overall, this study demonstrates that NAMs can be used to inform groupings of UVCBs, to assist in identification of repre­sentative substances in each group for testing when needed, and to fill data gaps by read-across.

Entities:  

Keywords:  iPSC; in vitro ; petroleum

Year:  2020        PMID: 33086383      PMCID: PMC7900923          DOI: 10.14573/altex.2006262

Source DB:  PubMed          Journal:  ALTEX        ISSN: 1868-596X            Impact factor:   6.043


  36 in total

1.  The challenge of using read-across within the EU REACH regulatory framework; how much uncertainty is too much? Dipropylene glycol methyl ether acetate, an exemplary case study.

Authors:  Nicholas Ball; Michael Bartels; Robert Budinsky; Joanna Klapacz; Sean Hays; Christopher Kirman; Grace Patlewicz
Journal:  Regul Toxicol Pharmacol       Date:  2013-12-28       Impact factor: 3.271

2.  UVCB substances: methodology for structural description and application to fate and hazard assessment.

Authors:  Sabcho D Dimitrov; Denitsa G Georgieva; Todor S Pavlov; Yordan H Karakolev; Panagiotis G Karamertzanis; Mike Rasenberg; Ovanes G Mekenyan
Journal:  Environ Toxicol Chem       Date:  2015-10-08       Impact factor: 3.742

3.  UVCB substances II: Development of an endpoint-nonspecific procedure for selection of computationally generated representative constituents.

Authors:  Stela S Kutsarova; Darina G Yordanova; Yordan H Karakolev; Stoyanka Stoeva; Mike Comber; Christopher B Hughes; Eleni Vaiopoulou; Sabcho D Dimitrov; Ovanes G Mekenyan
Journal:  Environ Toxicol Chem       Date:  2019-02-18       Impact factor: 3.742

4.  Beyond the 3Rs: Expanding the use of human-relevant replacement methods in biomedical research.

Authors:  Kathrin Herrmann; Francesca Pistollato; Martin L Stephens
Journal:  ALTEX       Date:  2019       Impact factor: 6.043

Review 5.  Characterization of the toxicological hazards of hydrocarbon solvents.

Authors:  Richard H Mckee; M David Adenuga; Juan-Carlos Carrillo
Journal:  Crit Rev Toxicol       Date:  2015-04       Impact factor: 5.635

6.  In vitro prenatal developmental toxicity induced by some petroleum substances is mediated by their 3- to 7-ring PAH constituent with a potential role for the aryl hydrocarbon receptor (AhR).

Authors:  Lenny Kamelia; Laura de Haan; Hans B Ketelslegers; Ivonne M C M Rietjens; Peter J Boogaard
Journal:  Toxicol Lett       Date:  2019-08-13       Impact factor: 4.372

7.  Predicting drug-induced hepatotoxicity using QSAR and toxicogenomics approaches.

Authors:  Yen Low; Takeki Uehara; Yohsuke Minowa; Hiroshi Yamada; Yasuo Ohno; Tetsuro Urushidani; Alexander Sedykh; Eugene Muratov; Viktor Kuz'min; Denis Fourches; Hao Zhu; Ivan Rusyn; Alexander Tropsha
Journal:  Chem Res Toxicol       Date:  2011-07-21       Impact factor: 3.739

8.  The relationship between developmental toxicity and aromatic-ring class profile of high-boiling petroleum substances.

Authors:  F Jay Murray; Randy N Roth; Mark J Nicolich; Thomas M Gray; Barry J Simpson
Journal:  Regul Toxicol Pharmacol       Date:  2013-05-13       Impact factor: 3.271

9.  Correlation of mutagenic and dermal carcinogenic activities of mineral oils with polycyclic aromatic compound content.

Authors:  T A Roy; S W Johnson; G R Blackburn; C R Mackerer
Journal:  Fundam Appl Toxicol       Date:  1988-04

10.  Supporting read-across using biological data.

Authors:  Hao Zhu; Mounir Bouhifd; Elizabeth Donley; Laura Egnash; Nicole Kleinstreuer; E Dinant Kroese; Zhichao Liu; Thomas Luechtefeld; Jessica Palmer; David Pamies; Jie Shen; Volker Strauss; Shengde Wu; Thomas Hartung
Journal:  ALTEX       Date:  2016-02-11       Impact factor: 6.043

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  4 in total

1.  Cardiotoxicity Hazard and Risk Characterization of ToxCast Chemicals Using Human Induced Pluripotent Stem Cell-Derived Cardiomyocytes from Multiple Donors.

Authors:  Sarah D Burnett; Alexander D Blanchette; Weihsueh A Chiu; Ivan Rusyn
Journal:  Chem Res Toxicol       Date:  2021-08-27       Impact factor: 3.739

2.  ToxPi*GIS Toolkit: creating, viewing, and sharing integrative visualizations for geospatial data using ArcGIS.

Authors:  Jonathon Fleming; Skylar W Marvel; Stacy Supak; Alison A Motsinger-Reif; David M Reif
Journal:  J Expo Sci Environ Epidemiol       Date:  2022-04-26       Impact factor: 6.371

3.  Grouping of UVCB substances with dose-response transcriptomics data from human cell-based assays.

Authors:  John S House; Fabian A Grimm; William D Klaren; Abigail Dalzell; Srikeerthana Kuchi; Shu-Dong Zhang; Klaus Lenz; Peter J Boogaard; Hans B Ketelslegers; Timothy W Gant; Ivan Rusyn; Fred A Wright
Journal:  ALTEX       Date:  2022-03-10       Impact factor: 6.250

4.  Potential Human Health Hazard of Post-Hurricane Harvey Sediments in Galveston Bay and Houston Ship Channel: A Case Study of Using In Vitro Bioactivity Data to Inform Risk Management Decisions.

Authors:  Zunwei Chen; Suji Jang; James M Kaihatu; Yi-Hui Zhou; Fred A Wright; Weihsueh A Chiu; Ivan Rusyn
Journal:  Int J Environ Res Public Health       Date:  2021-12-19       Impact factor: 3.390

  4 in total

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