| Literature DB >> 33082828 |
Yang Ma1,2, Wenjun Wang1,2, Jiani Yang1, Sha Zhang3, Zhe Li3, Fei Li1, Shaojie Huang2, Lu Lei1, Kai Wang1,2, Aidong Wen1,2, Yi Ding1,2.
Abstract
OBJECTIVE: This study is aimed to analyze the active ingredients, drug targets, and related pathways in the combination of Salvia miltiorrhiza (SM) and Radix puerariae (RP) in the treatment of cardio-cerebral vascular diseases (CCVDs).Entities:
Year: 2020 PMID: 33082828 PMCID: PMC7566220 DOI: 10.1155/2020/6937186
Source DB: PubMed Journal: Evid Based Complement Alternat Med ISSN: 1741-427X Impact factor: 2.629
Figure 1Workflow of network pharmacology analysis.
Figure 2Linkage of target compounds and target genes. (a) The network of herbal medicine compound in SM and RP. The yellow diamond is SM and RP, and the blue pentagon is the active ingredient. (b, c) The component-target diagram of SM and RP. The yellow hexagon is the active ingredients, and the green ellipse is the target. (d) The Veeny diagram of the target genes for SM and RP.
Table of main active ingredients of SM and RP.
| Mol id | Components | Structure | OB (%) | DL (%) |
|---|---|---|---|---|
| SM MOL001601 | 1,2,5,6-Tetrahydrotanshinone |
| 38.75 | 0.36 |
| MOL001659 | Poriferasterol |
| 43.83 | 0.76 |
| MOL001942 | Isoimperatorin |
| 45.46 | 0.23 |
| MOL002222 | Sugiol |
| 36.11 | 0.28 |
| MOL002651 | Dehydrotanshinone II A |
| 43.76 | 0.4 |
| MOL002776 | Baicalin |
| 40.12 | 0.75 |
| MOL000569 | Digallate |
| 61.85 | 0.26 |
| MOL000006 | Luteolin |
| 36.16 | 0.25 |
| MOL007036 | 5,6-Dihydroxy-7-isopropyl-1,1-dimethyl-2,3-dihydrophenanthren-4-one |
| 33.77 | 0.29 |
| MOL007041 | 2-Isopropyl-8-methylphenanthrene-3,4-dione |
| 40.86 | 0.23 |
| MOL007045 | 3 |
| 44.93 | 0.44 |
| MOL007048 | (E)-3-[2-(3, 4-Dihydroxyphenyl)-7-hydroxy-benzofuran-4-yl]acrylic acid |
| 48.24 | 0.31 |
| MOL007049 | 4-Methylenemiltirone |
| 34.35 | 0.23 |
| MOL007050 | 2-(4-Hydroxy-3-methoxyphenyl)-5-(3-hydroxypropyl)-7-methoxy-3-benzofurancarboxaldehyde |
| 62.78 | 0.4 |
| MOL007058 | Formyltanshinone |
| 73.44 | 0.42 |
| MOL007059 | 3- |
| 32.16 | 0.41 |
| MOL007061 | Methylenetanshinquinone |
| 37.07 | 0.36 |
| MOL007063 | Przewalskin a |
| 37.11 | 0.65 |
| MOL007064 | Przewalskin b |
| 110.32 | 0.44 |
| MOL007068 | Przewaquinone B |
| 62.24 | 0.41 |
| MOL007069 | Przewaquinone c |
| 55.74 | 0.4 |
| MOL007070 | (6S, 7R)-6,7-Dihydroxy-1,6-dimethyl-8,9-dihydro-7H-naphtho[8,7-g]benzofuran-10,11-dione |
| 41.31 | 0.45 |
| MOL007071 | Przewaquinone f |
| 40.31 | 0.46 |
| MOL007077 | Sclareol |
| 43.67 | 0.21 |
| MOL007079 | Tanshinaldehyde |
| 52.47 | 0.45 |
| MOL007081 | Danshenol B |
| 57.95 | 0.56 |
| MOL007082 | Danshenol A |
| 56.97 | 0.52 |
| MOL007085 | Salvilenone |
| 30.38 | 0.38 |
| MOL007088 | Cryptotanshinone |
| 52.34 | 0.4 |
| MOL007093 | Danshexinkum d |
| 38.88 | 0.55 |
| MOL007094 | Danshenspiroketallactone |
| 50.43 | 0.31 |
| MOL007098 | Deoxyneocryptotanshinone |
| 49.4 | 0.29 |
| MOL007100 | Dihydrotanshinlactone |
| 38.68 | 0.32 |
| MOL007101 | DihydrotanshinoneI |
| 45.04 | 0.36 |
| MOL007105 | Epidanshenspiroketallactone |
| 68.27 | 0.31 |
| MOL007107 | C09092 |
| 36.07 | 0.25 |
| MOL007108 | Isocryptotanshi-none |
| 54.98 | 0.39 |
| MOL007111 | Isotanshinone II |
| 49.92 | 0.4 |
| MOL007119 | Miltionone I |
| 49.68 | 0.32 |
| MOL007120 | Miltionone II |
| 71.03 | 0.44 |
| MOL007121 | Miltipolone |
| 36.56 | 0.37 |
| MOL007122 | Miltirone |
| 38.76 | 0.25 |
| MOL007124 | Neocryptotanshinone ii |
| 39.46 | 0.23 |
| MOL007125 | Neocryptotanshinone |
| 52.49 | 0.32 |
| MOL007127 | 1-Methyl-8,9-dihydro-7H-naphtho[5,6-g]benzofuran-6,10,11-trione |
| 34.72 | 0.37 |
| MOL007130 | Prolithospermic acid |
| 64.37 | 0.31 |
| MOL007132 | (2R)-3-(3,4-Dihydroxyphenyl)-2-[(Z)-3-(3,4-dihydroxyphenyl)acryloyl]oxy-propionic acid |
| 109.38 | 0.35 |
| MOL007141 | Salvianolic acid g |
| 45.56 | 0.61 |
| MOL007142 | Salvianolic acid j |
| 43.38 | 0.72 |
| MOL007143 | Salvilenone I |
| 32.43 | 0.23 |
| MOL007145 | Salviolone |
| 31.72 | 0.24 |
| MOL007150 | (6S)-6-Hydroxy-1-methyl-6-methylol-8,9-dihydro-7H-naphtho[8,7-g]benzofuran-10,11-quinone |
| 75.39 | 0.46 |
| MOL007151 | Tanshindiol B |
| 42.67 | 0.45 |
| MOL007152 | Przewaquinone E |
| 42.85 | 0.45 |
| MOL007154 | Tanshinone iia |
| 49.89 | 0.4 |
| MOL007155 | (6S)-6-(Hydroxymethyl)-1,6-dimethyl-8,9-dihydro-7H-naphtho[8,7-g]benzofuran-10,11-dione |
| 65.26 | 0.45 |
| MOL007156 | Tanshinone ? |
| 45.64 | 0.3 |
| RP MOL000392 | Formononetin |
| 69.67 | 0.21 |
| MOL000358 | Beta-sitosterol |
| 36.91 | 0.75 |
| MOL002959 | 3'-Methoxydaidzein |
| 48.57 | 0.24 |
| MOL012297 | Puerarin [ |
| 24.03 | 0.39 |
GO enrichment analysis results.
| GO enrichment | Count | |
|---|---|---|
| MF | Zinc ion binding | 9 |
| Transcription factor activity and sequence-specific DNA binding | 8 | |
| Serine-type endopeptidase activity | 7 | |
| Sequence-specific DNA binding | 7 | |
| DNA binding | 7 | |
| CC | Extracellular space | 21 |
| Plasma membrane | 13 | |
| Extracellular exosome | 12 | |
| Integral component of plasma membrane | 10 | |
| Cell surface | 8 | |
| BP | Positive regulation of transcription from RNA polymerase II promoter | 13 |
| Transcription, DNA templated | 8 | |
| Positive regulation of ERK1 and ERK2 cascades | 7 | |
| Positive regulation of cell proliferation | 7 | |
| Positive regulation of transcription, DNA-templated | 7 |
Figure 3KEGG pathways and GO analysis by David database: (a) GO analysis of candidate targets. Database showed the five remarkably enriched items in the biological processes (BP), cell component (CC), and molecular function (MF); (b) KEGG pathways of target genes; (c) main functional annotation clusters by Biocarta analysis.
KEGG pathway enrichment analysis.
| KEGG pathway | Number of targets | Count |
|---|---|---|
| Pathways in cancer | IL6, AR, PTGS2, PDGFA, MMP9, PPARG, TP53, MMP2, TGFB1, MMP1, STAT3, AGTR1, HIF1A, VEGFA, F2R | 15 |
| Neuroactive ligand-receptor interaction | AGTR1, ADRB2, DRD2, CHRM2, LEPR, F2, ADRA1A, NR3C1, HTR2C, F2R, HTR2A | 11 |
| Proteoglycans in cancer | HIF1A, TNF, MMP9, VEGFA, ESR1, TP53, MMP2, TGFB1, STAT3 | 9 |
| PI3K-Akt signaling pathway | IL4, IL6, PDGFA, CHRM2, VEGFA, TP53, NOS3, JAK3, F2R | 9 |
| Malaria | VCAM1, ICAM1, SELP, IL6, TNF, IFNG, TGFB1, IL10 | 8 |
| Calcium signaling pathway | AGTR1, ADRB2, CHRM2, ADRA1A, NOS3, HTR2C, F2R, HTR2A | 8 |
| HTLV-I infection | VCAM1, ICAM1, IL6, TNF, PDGFA, TP53, JAK3, TGFB1 | 8 |
| Inflammatory bowel disease (IBD) | IL4, IL6, TNF, IFNG, TGFB1, IL10, STAT3 | 7 |
| Rheumatoid arthritis | ICAM1, IL6, TNF, IFNG, VEGFA, TGFB1, MMP1 | 7 |
| HIF-1 signaling pathway | IL6, HIF1A, IFNG, EDN1, VEGFA, NOS3, STAT3 | 7 |
| TNF signaling pathway | VCAM1, ICAM1, IL6, TNF, PTGS2, MMP9, EDN1 | 7 |
| Jak-STAT signaling pathway | IL4, IL6, LEPR, IFNG, JAK3, IL10, STAT3 | 7 |
| Cytokine-cytokine receptor interaction | IL4, IL6, TNF, LEPR, IFNG, TGFB1, IL10 | 7 |
| African trypanosomiasis | VCAM1, ICAM1, IL6, TNF, IFNG, IL10 | 6 |
| Leishmaniasis | IL4, TNF, PTGS2, IFNG, TGFB1, IL10 | 6 |
Figure 4Component-target-path network. The blue diamond represents the target, the red diamond represents the cotarget, the yellow hexagon represents the SM active component, the green hexagon represents the RP active component, and the pink rectangle represents the pathway.
Figure 5Protein-protein interaction (PPI) networks of active ingredients of SM and RP for the treatment of CCVDs. Each node represents the relevant gene, and the edge means line thickness indicates the strength of data support. PPI network map of active components and diseases.