| Literature DB >> 33081858 |
Sean Wei Xiang Ong1,2, Pei Hua Lee1,2, Yian Kim Tan3, Li Min Ling1,2, Benjamin Choon Heng Ho4, Ching Ging Ng3, Dong Ling Wang3, Boon Huan Tan3, Yee-Sin Leo1,2,5,6, Oon-Tek Ng1,2,5, Michelle Su Yen Wong3, Kalisvar Marimuthu1,2,6.
Abstract
BACKGROUND: The risk of environmental contamination by severe acute respiratory coronavirus virus 2 (SARS-CoV-2) in the intensive care unit (ICU) is unclear. We evaluated the extent of environmental contamination in the ICU and correlated this with patient and disease factors, including the impact of different ventilatory modalities.Entities:
Mesh:
Year: 2020 PMID: 33081858 PMCID: PMC7653228 DOI: 10.1017/ice.2020.1278
Source DB: PubMed Journal: Infect Control Hosp Epidemiol ISSN: 0899-823X Impact factor: 3.254
Clinical Data of Patients in Rooms Sampled and Sites of Environmental Contamination
| No. | Age | Sex | Day of Illness | Ventilatory Support | AGP in the Past 24 h | Clinical Ct Value | Environmental Contamination | Percentage Contamination | Location | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CT | BR | VT | IP | ST | FL | GW | GD | AV | SP | |||||||||
| 1 | 50 | F | 19 | HFNO | Nil | 34.38 | Yes | 10 | … | X | … | … | … | … | … | … | … | … |
| 2 | 64 | M | 16 | HFNO | Extubation | 34.40 | Yes | 20 | … | X | … | X | … | … | … | … | … | … |
| 3 | 61 | M | 20 | HFNO | Extubation | 33.50 | Yes | 10 | … | X | … | … | … | … | … | … | … | … |
| 4 | 36 | F | 18 | HFNO | Nil | 35.48 | No | 0 | … | … | … | … | … | … | … | … | … | … |
| 5 | 86 | F | 32 | Intubated | Nil | 35.04 | Yes | 10 | … | … | … | … | … | … | X | … | … | … |
| 6 | 82 | M | 14 | Intubated | Nil | 27.77 | Yes | 10 | … | … | … | … | … | … | … | … | X | … |
| 7 | 69 | F | 10 | Intubated | Nil | 23.31 | Yes | 30 | … | … | … | … | X | X | … | … | … | X |
| 8 | 60 | M | 23 | Intubated | Nil | 23.13 | No | 0 | … | … | … | … | … | … | … | … | … | … |
| 9 | 37 | M | 21 | Nil | Nil | NA | Yes | 10 | … | … | … | … | … | X | … | … | … | … |
| 10 | 73 | M | 12 | Intubated | Intubation | 29.55 | No | 0 | … | … | … | … | … | … | … | … | … | … |
| 11 | 52 | M | 9 | HFNO | Nil | 25.94 | Yes | 20 | … | … | … | … | … | X | … | … | X | … |
| 12 | 45 | M | 6 | Nil | Nil | 28.62 | Yes | 20 | … | … | … | X | … | … | … | … | X | … |
| 13 | 69 | F | 17 | Intubated | Nil | 32.50 | No | 0 | … | … | … | … | … | … | … | … | … | … |
| 14 | 51 | M | 11 | HFNO | Nil | 32.25 | No | 0 | … | … | … | … | … | … | … | … | … | … |
| 15 | 35 | M | 4 | Nil | Nil | 30.18 | No | 0 | … | … | … | … | … | … | … | … | … | … |
| 16 | 45 | M | 13 | HFNO | Nil | 38.99 | Yes | 20 | … | … | X | … | … | X | … | … | … | … |
| 17 | 52 | M | 16 | Intubated | Nil | 36.56 | Yes | 10 | … | X | … | … | … | … | … | … | … | … |
| 18 | 30 | M | 6 | HFNO | Nil | 24.34 | Yes | 20 | … | X | … | … | … | X | … | … | … | … |
| 19 | 35 | M | 14 | Nil | Nil | NA | Yes | 50 | … | X | X | X | … | … | X | … | X | … |
| 20 | 45 | M | 7 | HFNO | Nil | 29.93 | Yes | 40 | … | … | … | X | … | X | … | … | X | X |
Note. AGP, aerosol-generating procedure; Ct, cycle threshold; CT, cardiac table; BR, bed rail; VT, ventilator; IP, infusion pumps; ST, stethoscope; FL, floor; GW, glass window; GD, glass door; AV, air outlet vent; SP, surgical pendant; F, female; M, male; HFNO, high-flow nasal oxygen; NA, not available; -, no contamination; X, contamination present
Fig. 1.Percentage contamination by sites sampled in patient rooms.
Univariate Logistic Regression Analysis of Factors Associated With Presence of Environmental Contamination
| Variable | Environmental Contamination (n=14) | No Environmental Contamination (n=6) | Odds Ratio |
|
|---|---|---|---|---|
| Age, median (IQR) | 51 (45–64) | 55.5 (36–69) | 0.999 (0.94–1.06) | .98 |
| Sex, male, no. (%) | 11 (78.6) | 4 (66.7) | .61 | |
| Day of illness, median (IQR) | 14 (9–19) | 14.5 (11–18) | 1.01 (0.87–1.17) | .92 |
|
| ||||
| Nil | 3 (21.4) | 1 (16.7) | Ref | Ref |
| Mechanical ventilation | 4 (28.6) | 3 (50) | 0.44 (0.03–6.70) | .56 |
| High-flow nasal oxygen | 7 (50) | 2 (33.3) | 1.17 (0.07–18.35) | .91 |
| AGP | 2 (14.3) | 1 (16.7) | 0.83 | .89 |
| Clinical Ct value, | 31.72 | 31.22 | 1.03 | .81 |
Note. CI, confidence interval; IQR, interquartile range; ref, reference; Ct, cycle threshold; AGP, aerosol-generating procedure.
Extent of Contamination in ICU Rooms Compared to General Ward Rooms[a,b]
| Variable | All ICU Rooms (n=23), No. (%) | All General Ward Rooms (n=27), No. (%) |
|---|---|---|
| Day of illness, median (IQR) | 14 (9–19) | 7 (4–17) |
| Clinical Ct value, median (IQR) | 30.18 (28.45–34.40) | 30.40 (22.04–35.24) |
| Any environmental contamination (at least 1 site) | 14 (60.9) | 17 (63.0) |
| No. of sites contaminated, median (IQR) | 1 (0–2) | 7 (4–17) |
| % of sites contaminated, median (IQR) | 10 (0–20) | 14.3 (0–42.9) |
| ICU Rooms With Contamination (n=14), | General Ward Rooms With Contamination (n=17), | |
| No. of sites contaminated, median (IQR) | 2 (1–2) | 2 (1–5) |
| % of sites contaminated, median (IQR) | 20 (10–20) | 28.6 (14.3–62.5) |
Note. ICU, intensive care unit; IQR, interquartile range; Ct, cycle threshold.
30 rooms (3 from ICU, 27 from general ward) were included from historical data in a previously published study for analysis to compare environmental contamination between ICU and general ward rooms.
Categorical variables are expressed as number (percentage), continuous variables are expressed as median (IQR).
Results of Surface Sampling of Intensive Care Unit Common Areas and Staff Pantry
| Surface Sampled | No. of Samples Collected | No. of Positive Samples | Cycle Threshold Value(s) | Viral Culture |
|---|---|---|---|---|
|
| ||||
| Floor | 12 | 5 | 36.20–37.76 | Negative |
| Nursing counter | 12 | 0 | … | … |
| Desktop computer | 12 | 1 | 37.00 | Negative |
| Mobile computer on wheels | 12 | 0 | … | … |
| PPE storage area | 12 | 0 | … | … |
|
| ||||
| Floor | 3 | 1 | 38.13 | Negative |
| Sofa | 3 | 0 | … | … |
| Dining table | 3 | 0 | … | … |
| Water dispenser handle | 3 | 0 | … | … |
| Fridge door handle | 3 | 1 | 38.14 | Negative |
Comparison of the Extent of Environmental Contamination in Hospital Environmental Sampling Studies
| Study | Total No. of Samples | Overall % Contaminated | ICU Sampling Done | No. of ICU Samples (Total) | No. of ICU Rooms Sampled | No. of ICU Room Samples | % Contaminated (ICU Rooms) | No. of ICU Common Area Samples | % Contaminated ICU Common Areas | Virus Culture Done |
|---|---|---|---|---|---|---|---|---|---|---|
| Current paper | 275 | 13.1 | Yes | 275 | 20 | 200 | 14 | 75 | 10.7 | Partially, negative |
| Cheng et al | 377 | 5.0 | Yes | Not stated | 1 | Not stated | Not stated | 0 | … | No |
| Chia et al | 245 | 26.5 | Yes | 35 | 3 | 35 | 0 | 0 | … | No |
| Colaneri et al | 26 | 7.7 | Yes[ | Not stated | 1 | Not stated | Not stated | 2 | 0 | Yes, all negative |
| Guo et al | 252 | 15.1 | Yes | 131 | Not stated | 75 | 44 | 5 | 0 | No |
| Lei et al | 400[ | 2.5 | Yes | 218[ | 4 | Not stated | 05 | 0 | … | No |
| Razzini et al | 37 | 24.3 | Yes | 12 | 2 | 12 | 41.7 | 21 | 19 | No |
| Ryu et al | 79 | 16.5 | Yes | 23 | 2 | 23 | 26.1 | 0 | … | No |
| Su et al | 117 | 1.7 | Yes | 39[ | 1 | 39 | 5.1 | 0 | … | No |
| Wu et al | 200 | 19.0 | Yes | 24 | Not stated | 24[ | 37.5 | Not stated[ | NA | No |
| Ye et al | 626 | 13.6 | Yes | 69 | Not stated | 69[ | 31.9 | Not stated[ | NA | No |
| Zhou et al | 218 | 52.3 | Yes | 35 | 0 | … | NA | 35 | 8.6 | Yes, all negative |
| Colaneri et al | 16 | 0 | No | NA | NA | NA | NA | NA | NA | No |
| Hu et al | 23[ | 47.8 | No | NA | NA | NA | NA | NA | NA | No |
| Ong et al | 140 | 12.1 | No | NA | NA | NA | NA | NA | NA | No |
| Jerry et al | 56[ | 21.4 | No | NA | NA | NA | NA | NA | NA | No |
| Shin et al | 24 | 0 | No | NA | NA | NA | NA | NA | NA | No |
| Wang et al | 36 | 0 | No | NA | NA | NA | NA | NA | NA | No |
| Wang et al | 84 | 7.1 | No | NA | NA | NA | NA | NA | NA | No |
| Wee et al | 445 | 2.2 | No | NA | NA | NA | NA | NA | NA | No |
| Wei et al | 112 | 39.3 | No | NA | NA | NA | NA | NA | NA | No |
Note. ICU, intensive care unit; NA, not applicable.
Sampling was done in a “sub-intensive care unit” and emergency unit, and individual numbers were not reported.
Total number of samples for both air and surface samples; exact number of surface samples not specified.
One sample, the inside of a closed suctioning tube, was excluded as we did not consider this an environmental sample.
Not stated in paper whether ICU samples were divided into rooms are common areas. Percentage reported is percentage positivity of all ICU samples.
Only samples taken before environmental decontamination were included.