| Literature DB >> 33072825 |
Christine Sambles1, Lakshmipriya Venkatesan1, Olanrewaju M Shittu1, James Harrison1, Karen Moore1, Leena Tripathi2, Murray Grant3, Rachel Warmington4, David J Studholme1.
Abstract
We performed shotgun genome sequencing on a total of 19 different Musa genotypes including representatives of wild banana species Musa acuminata and M. balibisiana, allopolyploid bananas and plantains, Fe'i banana, pink banana (also known as hairy banana) and abacá (also known as hemp banana). We aligned sequence reads against a previously sequenced reference genome and assessed ploidy and, in the case of allopolyploids, the contributions of the A and B genomes; this provides important quality-assurance data about the taxonomic identities of the sequenced plant material. These data will be useful for phylogenetics, crop improvement, studies of the complex story of intergenomic recombination in AAB and ABB allotriploid bananas and plantains and can be integrated into resources such as the Banana Genome Hub.Entities:
Keywords: DNA; Diversity; Genome; Musa; Plant; Sequence analysis
Year: 2020 PMID: 33072825 PMCID: PMC7549061 DOI: 10.1016/j.dib.2020.106341
Source DB: PubMed Journal: Data Brief ISSN: 2352-3409