| Literature DB >> 33072692 |
Gabriel Carrasco-Escobar1,2,3, Kimberly Fornace4, Daniel Wong3, Pierre G Padilla-Huamantinco1,5, Jose A Saldaña-Lopez5, Ober E Castillo-Meza5, Armando E Caballero-Andrade5, Edgar Manrique1,3, Jorge Ruiz-Cabrejos1,3, Jose Luis Barboza3, Hugo Rodriguez6, German Henostroza7, Dionicia Gamboa3,8,9, Marcia C Castro10, Joseph M Vinetz9,11, Alejandro Llanos-Cuentas9,12.
Abstract
Human movement affects malaria epidemiology at multiple geographical levels; however, few studies measure the role of human movement in the Amazon Region due to the challenging conditions and cost of movement tracking technologies. We developed an open-source low-cost 3D printable GPS-tracker and used this technology in a cohort study to characterize the role of human population movement in malaria epidemiology in a rural riverine village in the Peruvian Amazon. In this pilot study of 20 participants (mean age = 40 years old), 45,980 GPS coordinates were recorded over 1 month. Characteristic movement patterns were observed relative to the infection status and occupation of the participants. Applying two analytical animal movement ecology methods, utilization distributions (UDs) and integrated step selection functions (iSSF), we showed contrasting environmental selection and space use patterns according to infection status. These data suggested an important role of human movement in the epidemiology of malaria in the Peruvian Amazon due to high connectivity between villages of the same riverine network, suggesting limitations of current community-based control strategies. We additionally demonstrate the utility of this low-cost technology with movement ecology analysis to characterize human movement in resource-poor environments.Entities:
Keywords: Amazon; asymptomatic malaria; connectivity; human movement; malaria; movement ecology; networks; open-source
Year: 2020 PMID: 33072692 PMCID: PMC7542225 DOI: 10.3389/fpubh.2020.526468
Source DB: PubMed Journal: Front Public Health ISSN: 2296-2565
Figure 1Study area in Mazan district, Loreto Region, Peruvian Amazon. (A) GPS tracks collected and location of Gamitanacocha (GC), main ports: Mazan (MZ) and Indiana (IN), and Iquitos Capital City (IQT). Each color represents a participant. (B) Heatmap of transit based on GPS tracks. Maps were produced using QGIS 2.16 (QGIS Development Team, 2018. QGIS Geographic Information System. Open Source Geospatial Foundation Project. https://www.qgis.org/) based on public geographic data extracted from © OpenStreetMap contributors (www.openstreetmap.org) under Open Data Commons Open Database License (ODbL) 1.0 (http://openstreetmap.org/copyright).
Figure 2Open-source 3D printable GPS-tracker design and development. (A) SeeedStudio-RePhone modules used for the construction of the device. (B) CAD 3D model of the GPS-tracker device. (C) Preview of the configuration tool. Map shown in the configuration tool was produced using QGIS 2.16 (QGIS Development Team, 2018. QGIS Geographic Information System. Open Source Geospatial Foundation Project. https://www.qgis.org/) based on public geographic data extracted from © OpenStreetMap contributors (www.openstreetmap.org) under Open Data Commons under Open Data Commons Open Database License (ODbL) 1.0 (http://openstreetmap.org/copyright).
Human population movement descriptive statistics.
| Non-infected | 101 | 178.55 | 50.53 | 0.035 | 0.054 | 6.456 | 10.84 | 20.31 | 3.953 | 5.1662 | 16.427 | 8.207 | 5.804 | 1.9937 | 5.3064 |
| Infected | 155 | 180.30 | 52.28 | 0.042 | 0.069 | 7.642 | 13.03 | 20.25 | 4.19 | 9.7455 | 28.824 | 9.122 | 6.549 | 2.8332 | 7.4349 |
Figure 3Mobility patterns, Utilization Distributions (UDs) and Integrated Step-Selection Functions (iSSF) of Euclidean distance (ED) categories relative to infection status of inhabitants of Gamitanacocha. (A) Distribution of profiles among categories of travel distance and time (X- and Y- axes in logarithmic scale). Each point represents a trajectory (person-day travel) and colors represent infection status (dark = non-infected, white = Infected). (B) Travel patterns relative to infection status and occupation activities. UDs estimates based on the cumulative probability of a Kernel Distribution (KD) at different percentiles. (C) Individual utilization distribution calculated from GPS tracks. (D) Sample distribution of core (50) and home (95) range relative to infection status and time of movement. (E) iSSF, each color represents a participant. Solid horizontal lines represent the population-level estimates and 95% confidence intervals are given by the light gray boxes. The dashed horizontal line indicates no preference relative to Euclidian Distance (ED) category 1 [i.e., the community boundaries (the reference category)].