Literature DB >> 33065010

Lateral Gene Transfer of Anion-Conducting Channelrhodopsins between Green Algae and Giant Viruses.

Andrey Rozenberg1, Johannes Oppermann2, Jonas Wietek2, Rodrigo Gaston Fernandez Lahore2, Ruth-Anne Sandaa3, Gunnar Bratbak3, Peter Hegemann4, Oded Béjà5.   

Abstract

Channelrhodopsins (ChRs) are light-gated ion channels widely used as optogenetic tools for manipulating neuronal activity. The currently characterized ChR families include green algal and cryptophyte cation-conducting ChRs (CCRs) and cryptophyte, haptophyte, and stramenopile anion-conducting ChRs (ACRs). Here, we report the discovery of a new family of phylogenetically distinct ChRs encoded by marine giant viruses and acquired from their unicellular green algal hosts. These previously unknown viral and green algal ChRs act as ACRs when expressed in cultured neuroblastoma-derived cells and are likely involved in behavioral responses to light.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Mimiviridae; channelrhodopsins; giant viruses; green algae; lateral gene transfer; metagenomics; ocean; optogenetics; prasinophytes

Year:  2020        PMID: 33065010     DOI: 10.1016/j.cub.2020.09.056

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  12 in total

1.  Rhodopsin-bestrophin fusion proteins from unicellular algae form gigantic pentameric ion channels.

Authors:  Andrey Rozenberg; Igor Kaczmarczyk; Donna Matzov; Johannes Vierock; Takashi Nagata; Masahiro Sugiura; Kota Katayama; Yuma Kawasaki; Masae Konno; Yujiro Nagasaka; Mako Aoyama; Ishita Das; Efrat Pahima; Jonathan Church; Suliman Adam; Veniamin A Borin; Ariel Chazan; Sandra Augustin; Jonas Wietek; Julien Dine; Yoav Peleg; Akira Kawanabe; Yuichiro Fujiwara; Ofer Yizhar; Mordechai Sheves; Igor Schapiro; Yuji Furutani; Hideki Kandori; Keiichi Inoue; Peter Hegemann; Oded Béjà; Moran Shalev-Benami
Journal:  Nat Struct Mol Biol       Date:  2022-06-16       Impact factor: 18.361

2.  RubyACRs, nonalgal anion channelrhodopsins with highly red-shifted absorption.

Authors:  Elena G Govorunova; Oleg A Sineshchekov; Hai Li; Yumei Wang; Leonid S Brown; John L Spudich
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-01       Impact factor: 11.205

3.  Structural basis for channel conduction in the pump-like channelrhodopsin ChRmine.

Authors:  Koichiro E Kishi; Yoon Seok Kim; Masahiro Fukuda; Masatoshi Inoue; Tsukasa Kusakizako; Peter Y Wang; Charu Ramakrishnan; Eamon F X Byrne; Elina Thadhani; Joseph M Paggi; Toshiki E Matsui; Keitaro Yamashita; Takashi Nagata; Masae Konno; Sean Quirin; Maisie Lo; Tyler Benster; Tomoko Uemura; Kehong Liu; Mikihiro Shibata; Norimichi Nomura; So Iwata; Osamu Nureki; Ron O Dror; Keiichi Inoue; Karl Deisseroth; Hideaki E Kato
Journal:  Cell       Date:  2022-02-02       Impact factor: 66.850

Review 4.  Host Range and Coding Potential of Eukaryotic Giant Viruses.

Authors:  Tsu-Wang Sun; Chia-Ling Yang; Tzu-Tong Kao; Tzu-Haw Wang; Ming-Wei Lai; Chuan Ku
Journal:  Viruses       Date:  2020-11-21       Impact factor: 5.048

5.  A phylogenomic framework for charting the diversity and evolution of giant viruses.

Authors:  Frank O Aylward; Mohammad Moniruzzaman; Anh D Ha; Eugene V Koonin
Journal:  PLoS Biol       Date:  2021-10-27       Impact factor: 8.029

Review 6.  Emerging Diversity of Channelrhodopsins and Their Structure-Function Relationships.

Authors:  Elena G Govorunova; Oleg A Sineshchekov; John L Spudich
Journal:  Front Cell Neurosci       Date:  2022-01-24       Impact factor: 5.505

7.  Biophysical characterization of light-gated ion channels using planar automated patch clamp.

Authors:  Elena G Govorunova; Oleg A Sineshchekov; Leonid S Brown; John L Spudich
Journal:  Front Mol Neurosci       Date:  2022-08-09       Impact factor: 6.261

8.  Diverse Trajectories Drive the Expression of a Giant Virus in the Oomycete Plant Pathogen Phytophthora parasitica.

Authors:  Sihem Hannat; Pierre Pontarotti; Philippe Colson; Marie-Line Kuhn; Eric Galiana; Bernard La Scola; Sarah Aherfi; Franck Panabières
Journal:  Front Microbiol       Date:  2021-06-01       Impact factor: 5.640

9.  High Transcriptional Activity and Diverse Functional Repertoires of Hundreds of Giant Viruses in a Coastal Marine System.

Authors:  Anh D Ha; Mohammad Moniruzzaman; Frank O Aylward
Journal:  mSystems       Date:  2021-07-13       Impact factor: 6.496

10.  Cation and Anion Channelrhodopsins: Sequence Motifs and Taxonomic Distribution.

Authors:  Elena G Govorunova; Oleg A Sineshchekov; Hai Li; Yumei Wang; Leonid S Brown; Alyssa Palmateer; Michael Melkonian; Shifeng Cheng; Eric Carpenter; Jordan Patterson; Gane K-S Wong; John L Spudich
Journal:  mBio       Date:  2021-07-20       Impact factor: 7.867

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