Literature DB >> 33064865

Direct colorimetric LAMP assay for rapid detection of African swine fever virus: A validation study during an outbreak in Vietnam.

Diem Hong Tran1, Hau Thi Tran1, Uyen Phuong Le1, Xuan Dang Vu2, Thi Bich Ngoc Trinh2, Hoang Dang Khoa Do1, Van Thai Than3,4, Le Minh Bui1, Van Van Vu1, Thi Lan Nguyen2, Huong Thi Thu Phung1, Van Phan Le2.   

Abstract

African swine fever (ASF) is a highly infectious viral disease with high mortality. The most recent ASF outbreak in Vietnam began in 2019, posing a threat to spread to the neighbouring Asian countries. Without a commercial vaccine or efficient chemotherapeutics, rapid diagnosis and necessary biosecurity procedures are required to control the disease. While the diagnostic method of ASF recommended by the World Organization of Animal Health is real-time PCR, the ideal diagnosis procedure including master mix setup, template extraction and a high-cost qPCR equipment for many samples being tested simultaneously is not portable. In this study, a colorimetric loop-mediated isothermal amplification (LAMP) assay was modified and evaluated for ASF virus detection using crude serum samples collected from domestic pigs in Vietnam during the 2019 outbreak. The LAMP results can be readily visualized to the naked eye within 30 min without the requirement of DNA extraction and sophisticated equipment. The sensitivity, specificity and limit of detection of direct colorimetric LAMP assay were comparable to a commercial diagnostic real-time PCR kit. Results strongly indicate that the adapted colorimetric LAMP assay has a remarkable potential for the in-field diagnosis of ASF.
© 2020 Wiley-VCH GmbH.

Entities:  

Keywords:  African swine fever; LAMP; colorimetric; crude samples; in-field diagnosis; rapid testing

Year:  2020        PMID: 33064865     DOI: 10.1111/tbed.13879

Source DB:  PubMed          Journal:  Transbound Emerg Dis        ISSN: 1865-1674            Impact factor:   5.005


  5 in total

1.  Canine parvovirus type 2c in Vietnam continues to produce distinct descendants with new mutations restricted to Vietnamese variants.

Authors:  Huong Thi Thanh Doan; Xuyen Thi Kim Le; Roan Thi Do; Khue Thi Nguyen; Thanh Hoa Le
Journal:  Arch Virol       Date:  2021-04-16       Impact factor: 2.574

2.  Signal-enhanced visual strand exchange amplification detection of African swine fever virus by the introduction of multimeric G-quadruplex/hemin DNAzyme.

Authors:  Xianyong Wu; Qiming Chen; Yuhao Huang; Qiqi Ning; Yingying Wang; Yilu Wang; Zhanmin Liu
Journal:  Anal Sci       Date:  2022-03-03       Impact factor: 2.081

3.  Evaluation of a Lateral Flow Assay for Rapid Detection of African Swine Fever Virus in Multiple Sample Types.

Authors:  Chukwunonso Onyilagha; Kelvin Nguyen; Pam D Luka; Ularamu Hussaini; Adeyinka Adedeji; Theophilus Odoom; Aruna Ambagala
Journal:  Pathogens       Date:  2022-01-24

4.  Development of a Novel Loop Mediated Isothermal Amplification Assay (LAMP) for the Rapid Detection of Epizootic Haemorrhagic Disease Virus.

Authors:  Paulina Rajko-Nenow; Emma L A Howson; Duncan Clark; Natasha Hilton; Aruna Ambagala; Nicholas Svitek; John Flannery; Carrie Batten
Journal:  Viruses       Date:  2021-10-29       Impact factor: 5.048

5.  Point of care colourimetric and lateral flow LAMP assay for the detection of Haemonchus contortus in ruminant faecal samples.

Authors:  Rojesh Khangembam; Mariann Tóth; Nóra Vass; Marián Várady; Levente Czeglédi; Róbert Farkas; Alistair Antonopoulos
Journal:  Parasite       Date:  2021-12-15       Impact factor: 3.000

  5 in total

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