| Literature DB >> 33064625 |
Yingyu Liu1, Tyler C Helmann2, Paul Stodghill1,2, Melanie J Filiatrault1,2.
Abstract
New Guinea impatiens (NGI, Impatiens hawkeri) are popular bedding plants that can be affected by a number of pathogens. Using 16S rDNA sequencing and genus-specific PCR, we identified the first Dickeya dianthicola strain isolated from NGI presented with blackleg symptoms, herein designated as D. dianthicola 67-19. Here, we report a high-quality complete and annotated genome sequence of D. dianthicola 67-19. The 4,851,809 bp genome was assembled with Nanopore reads and polished with Illumina reads, yielding 422× and 105× coverage, respectively. This closed genome provides a resource for future research on comparative genomics and biology of D. dianthicola, which could translate to improved detection and disease management.Entities:
Keywords: Dickeya dianthicola; New Guinea impatiens; de novo assembly; whole genome sequence
Mesh:
Year: 2021 PMID: 33064625 DOI: 10.1094/PDIS-09-20-1968-A
Source DB: PubMed Journal: Plant Dis ISSN: 0191-2917 Impact factor: 4.438