Literature DB >> 33064625

Complete Genome Sequence Resource for the Necrotrophic Plant-Pathogenic Bacterium Dickeya dianthicola 67-19 Isolated From New Guinea Impatiens.

Yingyu Liu1, Tyler C Helmann2, Paul Stodghill1,2, Melanie J Filiatrault1,2.   

Abstract

New Guinea impatiens (NGI, Impatiens hawkeri) are popular bedding plants that can be affected by a number of pathogens. Using 16S rDNA sequencing and genus-specific PCR, we identified the first Dickeya dianthicola strain isolated from NGI presented with blackleg symptoms, herein designated as D. dianthicola 67-19. Here, we report a high-quality complete and annotated genome sequence of D. dianthicola 67-19. The 4,851,809 bp genome was assembled with Nanopore reads and polished with Illumina reads, yielding 422× and 105× coverage, respectively. This closed genome provides a resource for future research on comparative genomics and biology of D. dianthicola, which could translate to improved detection and disease management.

Entities:  

Keywords:  Dickeya dianthicola; New Guinea impatiens; de novo assembly; whole genome sequence

Mesh:

Year:  2021        PMID: 33064625     DOI: 10.1094/PDIS-09-20-1968-A

Source DB:  PubMed          Journal:  Plant Dis        ISSN: 0191-2917            Impact factor:   4.438


  2 in total

1.  The Broad Host Range Plant Pathogen Dickeya dianthicola Shows a High Genetic Diversity.

Authors:  Jacques Pédron; Jan M van der Wolf; Perrine Portier; Emma Caullireau; Frédérique Van Gijsegem
Journal:  Microorganisms       Date:  2022-05-13

2.  Genome-Wide Identification of Genes Important for Growth of Dickeya dadantii and Dickeya dianthicola in Potato (Solanum tuberosum) Tubers.

Authors:  Tyler C Helmann; Melanie J Filiatrault; Paul V Stodghill
Journal:  Front Microbiol       Date:  2022-01-25       Impact factor: 5.640

  2 in total

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