Literature DB >> 33059812

[Continuous expression and functional prediction of circular RNA in mouse lung development].

Xue Fu1, Yang Yang, Yan-Qing Shen, Xiao-Guang Zhou, Xiao-Yu Zhou.   

Abstract

OBJECTIVE: To study the continuous expression and potential function of circular RNA (circRNA), circ4:150439343|150477468 and circ15:73330849|73343359, in mouse lung development.
METHODS: According to the stage of lung development, lung tissue samples were collected from mice on embryonic day 16.5 (E16.5), embryonic day 18.5 (E18.5), and postnatal day 2 (P2). Hematoxylin and eosin staining was performed to observe the morphology of lung tissue. Quantitative real-time PCR (qRT-PCR) was used to measure the mRNA expression of circ4:150439343|150477468 and circ15:73330849|73343359 during late lung development; miRanda and TargetScan were used to predict the target miRNAs of circRNAs, and then GO and KEGG analysis was performed for the target genes to predict the potential function of circRNAs.
RESULTS: Type II alveolar epithelial cells were observed in the lung slices of E16.5 mice, with a gradual increase in number. On P2, the pulmonary alveoli expanded rapidly, the pulmonary interstitium became thinner, and the alveolar structure gradually became mature. The results of qRT-PCR showed that the relative expression of circ4:150439343|150477468 was continuously upregulated over time and the relative expression of circ15:73330849|73343359 was first downregulated and then upregulated (P<0.05). The KEGG and GO analysis showed that circRNAs were involved in the Notch, PI3K-Akt, and NF-κB signaling pathways.
CONCLUSIONS: Circ4:150439343|150477468 and circ15:73330849|73343359 can participate in lung development through the Notch signaling pathway.

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Year:  2020        PMID: 33059812      PMCID: PMC7568991     

Source DB:  PubMed          Journal:  Zhongguo Dang Dai Er Ke Za Zhi        ISSN: 1008-8830


  21 in total

1.  Identification and characterization of circular RNAs during the sea buckthorn fruit development.

Authors:  Guoyun Zhang; Songfeng Diao; Tong Zhang; Daoguo Chen; Caiyun He; Jianguo Zhang
Journal:  RNA Biol       Date:  2019-01-29       Impact factor: 4.652

2.  Immune System Regulation Affected by a Murine Experimental Model of Bronchopulmonary Dysplasia: Genomic and Epigenetic Findings.

Authors:  Cecilie Revhaug; Miroslaw Bik-Multanowski; Magdalena Zasada; Anne Gro W Rognlien; Clara-Cecilie Günther; Teofila Ksiązek; Anna Madetko-Talowska; Katarzyna Szewczyk; Agnieszka Grabowska; Przemko Kwinta; Jacek J Pietrzyk; Lars O Baumbusch; Ola D Saugstad
Journal:  Neonatology       Date:  2019-08-27       Impact factor: 4.035

3.  Long-term ventilation for children with chronic lung disease of infancy.

Authors:  Christopher D Baker
Journal:  Curr Opin Pediatr       Date:  2019-06       Impact factor: 2.856

4.  Epithelial Notch signaling regulates lung alveolar morphogenesis and airway epithelial integrity.

Authors:  Po-Nien Tsao; Chisa Matsuoka; Shu-Chen Wei; Atsuyasu Sato; Susumu Sato; Koichi Hasegawa; Hung-Kuan Chen; Thai-Yen Ling; Munemasa Mori; Wellington V Cardoso; Mitsuru Morimoto
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-30       Impact factor: 11.205

5.  Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.

Authors:  Ben Langmead; Cole Trapnell; Mihai Pop; Steven L Salzberg
Journal:  Genome Biol       Date:  2009-03-04       Impact factor: 13.583

6.  Lunatic Fringe-mediated Notch signaling is required for lung alveogenesis.

Authors:  Keli Xu; Erica Nieuwenhuis; Brenda L Cohen; Wei Wang; Angelo J Canty; Jayne S Danska; Leigh Coultas; Janet Rossant; Megan Y J Wu; Tino D Piscione; Andras Nagy; Achim Gossler; Geoff G Hicks; Chi-Chung Hui; R Mark Henkelman; Lisa X Yu; John G Sled; Thomas Gridley; Sean E Egan
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2009-11-06       Impact factor: 5.464

7.  Circular RNA alterations in the Bombyx mori midgut following B. mori nucleopolyhedrovirus infection.

Authors:  Xiaolong Hu; Min Zhu; Bo Liu; Zi Liang; Lixu Huang; Jian Xu; Lei Yu; Kun Li; Mengsheng Jiang; Renyu Xue; Guangli Cao; Chengliang Gong
Journal:  Mol Immunol       Date:  2018-08-11       Impact factor: 4.407

8.  FoxM1 mediates the progenitor function of type II epithelial cells in repairing alveolar injury induced by Pseudomonas aeruginosa.

Authors:  Yuru Liu; Ruxana T Sadikot; Guy R Adami; Vladimir V Kalinichenko; Srikanth Pendyala; Viswanathan Natarajan; You-yang Zhao; Asrar B Malik
Journal:  J Exp Med       Date:  2011-06-27       Impact factor: 14.307

Review 9.  An emerging function of circRNA-miRNAs-mRNA axis in human diseases.

Authors:  Dawei Rong; Handong Sun; Zhouxiao Li; Shuheng Liu; Chaoxi Dong; Kai Fu; Weiwei Tang; Hongyong Cao
Journal:  Oncotarget       Date:  2017-07-10

Review 10.  Notch signaling in the mammalian respiratory system, specifically the trachea and lungs, in development, homeostasis, regeneration, and disease.

Authors:  Hirofumi Kiyokawa; Mitsuru Morimoto
Journal:  Dev Growth Differ       Date:  2019-10-15       Impact factor: 2.053

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