Literature DB >> 33055240

Uncoupling interferon signaling and antigen presentation to overcome immunotherapy resistance due to JAK1 loss in melanoma.

Anusha Kalbasi1,2,3, Mito Tariveranmoshabad4, Kevin Hakimi4, Sarah Kremer4, Katie M Campbell5, Juan M Funes2, Agustin Vega-Crespo5, Giulia Parisi5, Ameya Champekar5, Christine Nguyen4, Davis Torrejon5, Daniel Shin5, Jesse M Zaretsky5, Robert D Damoiseaux3,6,7, Daniel E Speiser8, Pedro P Lopez-Casas9, Marisol Quintero9, Antoni Ribas2,3,5,6,10.   

Abstract

Defects in tumor-intrinsic interferon (IFN) signaling result in failure of immune checkpoint blockade (ICB) against cancer, but these tumors may still maintain sensitivity to T cell-based adoptive cell therapy (ACT). We generated models of IFN signaling defects in B16 murine melanoma observed in patients with acquired resistance to ICB. Tumors lacking Jak1 or Jak2 did not respond to ICB, whereas ACT was effective against Jak2 KO tumors, but not Jak1 KO tumors, where both type I and II tumor IFN signaling were defective. This was a direct result of low baseline class I major histocompatibility complex (MHC I) expression in B16 and the dependency of MHC I expression on either type I or type II IFN signaling. We used genetic and pharmacologic approaches to uncouple this dependency and restore MHC I expression. Through independent mechanisms, overexpression of NLRC5 (nucleotide-binding oligomerization domain-like receptor family caspase recruitment domain containing 5) and intratumoral delivery of BO-112, a potent nanoplexed version of polyinosinic:polycytidylic acid (poly I:C), each restored the efficacy of ACT against B16-Jak1 KO tumors. BO-112 activated double-stranded RNA (dsRNA) sensing (via protein kinase R and Toll-like receptor 3) and induced MHC I expression via nuclear factor κB, independent of both IFN signaling and NLRC5. In summary, we demonstrated that in the absence of tumor IFN signaling, MHC I expression is essential and sufficient for the efficacy of ACT. For tumors lacking MHC I expression due to deficient IFN signaling, activation of dsRNA sensors by BO-112 affords an alternative approach to restore the efficacy of ACT.
Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

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Year:  2020        PMID: 33055240      PMCID: PMC8053376          DOI: 10.1126/scitranslmed.abb0152

Source DB:  PubMed          Journal:  Sci Transl Med        ISSN: 1946-6234            Impact factor:   17.956


  49 in total

1.  A major chromatin regulator determines resistance of tumor cells to T cell-mediated killing.

Authors:  Deng Pan; Aya Kobayashi; Peng Jiang; Lucas Ferrari de Andrade; Rong En Tay; Adrienne M Luoma; Daphne Tsoucas; Xintao Qiu; Klothilda Lim; Prakash Rao; Henry W Long; Guo-Cheng Yuan; John Doench; Myles Brown; X Shirley Liu; Kai W Wucherpfennig
Journal:  Science       Date:  2018-01-04       Impact factor: 47.728

Review 2.  Perforin and granzymes: function, dysfunction and human pathology.

Authors:  Ilia Voskoboinik; James C Whisstock; Joseph A Trapani
Journal:  Nat Rev Immunol       Date:  2015-06       Impact factor: 53.106

3.  Genome engineering using the CRISPR-Cas9 system.

Authors:  F Ann Ran; Patrick D Hsu; Jason Wright; Vineeta Agarwala; David A Scott; Feng Zhang
Journal:  Nat Protoc       Date:  2013-10-24       Impact factor: 13.491

4.  Identification of essential genes for cancer immunotherapy.

Authors:  Shashank J Patel; Neville E Sanjana; Rigel J Kishton; Arash Eidizadeh; Suman K Vodnala; Maggie Cam; Jared J Gartner; Li Jia; Seth M Steinberg; Tori N Yamamoto; Anand S Merchant; Gautam U Mehta; Anna Chichura; Ophir Shalem; Eric Tran; Robert Eil; Madhusudhanan Sukumar; Eva Perez Guijarro; Chi-Ping Day; Paul Robbins; Steve Feldman; Glenn Merlino; Feng Zhang; Nicholas P Restifo
Journal:  Nature       Date:  2017-08-07       Impact factor: 49.962

5.  NLR family member NLRC5 is a transcriptional regulator of MHC class I genes.

Authors:  Torsten B Meissner; Amy Li; Amlan Biswas; Kyoung-Hee Lee; Yuen-Joyce Liu; Erkan Bayir; Dimitrios Iliopoulos; Peter J van den Elsen; Koichi S Kobayashi
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-16       Impact factor: 11.205

6.  The Molecular Signatures Database (MSigDB) hallmark gene set collection.

Authors:  Arthur Liberzon; Chet Birger; Helga Thorvaldsdóttir; Mahmoud Ghandi; Jill P Mesirov; Pablo Tamayo
Journal:  Cell Syst       Date:  2015-12-23       Impact factor: 10.304

7.  Analysis of HLA class I expression in progressing and regressing metastatic melanoma lesions after immunotherapy.

Authors:  Rafael Carretero; José M Romero; Francisco Ruiz-Cabello; Isabel Maleno; Felix Rodriguez; Francisco M Camacho; Luis M Real; Federico Garrido; Teresa Cabrera
Journal:  Immunogenetics       Date:  2008-06-11       Impact factor: 2.846

8.  Immune cell activation by bacterial CpG-DNA through myeloid differentiation marker 88 and tumor necrosis factor receptor-associated factor (TRAF)6.

Authors:  H Häcker; R M Vabulas; O Takeuchi; K Hoshino; S Akira; H Wagner
Journal:  J Exp Med       Date:  2000-08-21       Impact factor: 14.307

9.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

10.  Cytofkit: A Bioconductor Package for an Integrated Mass Cytometry Data Analysis Pipeline.

Authors:  Hao Chen; Mai Chan Lau; Michael Thomas Wong; Evan W Newell; Michael Poidinger; Jinmiao Chen
Journal:  PLoS Comput Biol       Date:  2016-09-23       Impact factor: 4.475

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  23 in total

1.  Potentiating adoptive cell therapy using synthetic IL-9 receptors.

Authors:  Anusha Kalbasi; Mikko Siurala; Leon L Su; Mito Tariveranmoshabad; Lora K Picton; Pranali Ravikumar; Peng Li; Jian-Xin Lin; Helena Escuin-Ordinas; Tong Da; Sarah V Kremer; Amy L Sun; Sofia Castelli; Sangya Agarwal; John Scholler; Decheng Song; Philipp C Rommel; Enrico Radaelli; Regina M Young; Warren J Leonard; Antoni Ribas; Carl H June; K Christopher Garcia
Journal:  Nature       Date:  2022-06-08       Impact factor: 69.504

2.  LCOR mediates interferon-independent tumor immunogenicity and responsiveness to immune-checkpoint blockade in triple-negative breast cancer.

Authors:  Iván Pérez-Núñez; Catalina Rozalén; José Ángel Palomeque; Irene Sangrador; Mariona Dalmau; Laura Comerma; Anna Hernández-Prat; David Casadevall; Silvia Menendez; Daniel Dan Liu; Minhong Shen; Jordi Berenguer; Irene Rius Ruiz; Raul Peña; José Carlos Montañés; M Mar Albà; Sarah Bonnin; Julia Ponomarenko; Roger R Gomis; Juan Miguel Cejalvo; Sonia Servitja; Diego M Marzese; Lluis Morey; Leonie Voorwerk; Joaquín Arribas; Begoña Bermejo; Marleen Kok; Lajos Pusztai; Yibin Kang; Joan Albanell; Toni Celià-Terrassa
Journal:  Nat Cancer       Date:  2022-03-17

3.  Tilsotolimod with Ipilimumab Drives Tumor Responses in Anti-PD-1 Refractory Melanoma.

Authors:  Cara Haymaker; Daniel H Johnson; Ravi Murthy; Salah-Eddine Bentebibel; Marc I Uemura; Courtney W Hudgens; Houssein Safa; Marihella James; Robert H I Andtbacka; Douglas B Johnson; Montaser Shaheen; Michael A Davies; Shah Rahimian; Srinivas K Chunduru; Denái R Milton; Michael T Tetzlaff; Willem W Overwijk; Patrick Hwu; Nashat Gabrail; Sudhir Agrawal; Gary Doolittle; Igor Puzanov; Joseph Markowitz; Chantale Bernatchez; Adi Diab
Journal:  Cancer Discov       Date:  2021-03-11       Impact factor: 39.397

Review 4.  Intratumoural administration and tumour tissue targeting of cancer immunotherapies.

Authors:  Ignacio Melero; Eduardo Castanon; Maite Alvarez; Stephane Champiat; Aurelien Marabelle
Journal:  Nat Rev Clin Oncol       Date:  2021-05-18       Impact factor: 66.675

5.  Therapeutically Increasing MHC-I Expression Potentiates Immune Checkpoint Blockade.

Authors:  Shengqing Stan Gu; Wubing Zhang; Xiaoqing Wang; Peng Jiang; Nicole Traugh; Ziyi Li; Clifford Meyer; Blair Stewig; Yingtian Xie; Xia Bu; Michael P Manos; Alba Font-Tello; Evisa Gjini; Ana Lako; Klothilda Lim; Jake Conway; Alok K Tewari; Zexian Zeng; Avinash Das Sahu; Collin Tokheim; Jason L Weirather; Jingxin Fu; Yi Zhang; Benjamin Kroger; Jin Hua Liang; Paloma Cejas; Gordon J Freeman; Scott Rodig; Henry W Long; Benjamin E Gewurz; F Stephen Hodi; Myles Brown; X Shirley Liu
Journal:  Cancer Discov       Date:  2021-02-15       Impact factor: 38.272

Review 6.  Regulation of the antigen presentation machinery in cancer and its implication for immune surveillance.

Authors:  Adithya Balasubramanian; Thomas John; Marie-Liesse Asselin-Labat
Journal:  Biochem Soc Trans       Date:  2022-04-29       Impact factor: 4.919

Review 7.  The MHC Class-I Transactivator NLRC5: Implications to Cancer Immunology and Potential Applications to Cancer Immunotherapy.

Authors:  Akhil Shukla; Maryse Cloutier; Madanraj Appiya Santharam; Sheela Ramanathan; Subburaj Ilangumaran
Journal:  Int J Mol Sci       Date:  2021-02-17       Impact factor: 5.923

Review 8.  Acquired Resistance to Immune Checkpoint Blockades: The Underlying Mechanisms and Potential Strategies.

Authors:  Binghan Zhou; Yuan Gao; Peng Zhang; Qian Chu
Journal:  Front Immunol       Date:  2021-06-14       Impact factor: 7.561

Review 9.  HLA class I loss in colorectal cancer: implications for immune escape and immunotherapy.

Authors:  Per Anderson; Natalia Aptsiauri; Francisco Ruiz-Cabello; Federico Garrido
Journal:  Cell Mol Immunol       Date:  2021-01-20       Impact factor: 22.096

Review 10.  Deregulation of HLA-I in cancer and its central importance for immunotherapy.

Authors:  Ahmet Hazini; Kerry Fisher; Len Seymour
Journal:  J Immunother Cancer       Date:  2021-08       Impact factor: 13.751

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