Literature DB >> 33046529

Sensitive Recovery of Complete SARS-CoV-2 Genomes from Clinical Samples by Use of Swift Biosciences' SARS-CoV-2 Multiplex Amplicon Sequencing Panel.

Amin Addetia1, Michelle J Lin1, Vikas Peddu1, Pavitra Roychoudhury1,2, Keith R Jerome1,2, Alexander L Greninger3,2.   

Abstract

Entities:  

Keywords:  SARS-CoV-2; amplicon panel; genome; genome recovery

Year:  2020        PMID： 33046529     DOI： 10.1128/JCM.02226-20

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


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  22 in total

1.  All eyes on a hurdle race for a SARS-CoV-2 vaccine.

Authors:  Christian Gaebler; Michel C Nussenzweig
Journal:  Nature       Date:  2020-10       Impact factor: 49.962

2.  Efficacy of Parainfluenza Virus 5 (PIV5)-vectored Intranasal COVID-19 Vaccine as a Single Dose Vaccine and as a Booster against SARS-CoV-2 Variants.

Authors:  Ashley C Beavis; Zhuo Li; Kelsey Briggs; María Cristina Huertas-Díaz; Elizabeth R Wrobel; Maria Najera; Dong An; Nichole Orr-Burks; Jackelyn Murray; Preetish Patil; Jiachen Huang; Jarrod Mousa; Linhui Hao; Tien-Ying Hsiang; Michael Gale; Stephen B Harvey; S Mark Tompkins; Robert Jeffrey Hogan; Eric R Lafontaine; Hong Jin; Biao He
Journal:  bioRxiv       Date:  2022-06-08

3.  Genetic Diversity and Evolutionary Convergence of Cryptic SARS-CoV-2 Lineages Detected Via Wastewater Sequencing.

Authors:  Devon A Gregory; Monica Trujillo; Clayton Rushford; Anna Flury; Sherin Kannoly; Kaung Myat San; Dustin Lyfoung; Roger W Wiseman; Karen Bromert; Ming-Yi Zhou; Ellen Kesler; Nathan Bivens; Jay Hoskins; Chung-Ho Lin; David H O'Connor; Chris Wieberg; Jeff Wenzel; Rose S Kantor; John J Dennehy; Marc C Johnson
Journal:  medRxiv       Date:  2022-06-03

4.  Molecular Analysis of SARS-CoV-2 Lineages in Armenia.

Authors:  Diana Avetyan; Siras Hakobyan; Maria Nikoghosyan; Lilit Ghukasyan; Gisane Khachatryan; Tamara Sirunyan; Nelli Muradyan; Roksana Zakharyan; Andranik Chavushyan; Varduhi Hayrapetyan; Anahit Hovhannisyan; Shah A Mohamed Bakhash; Keith R Jerome; Pavitra Roychoudhury; Alexander L Greninger; Lyudmila Niazyan; Mher Davidyants; Gayane Melik-Andreasyan; Shushan Sargsyan; Lilit Nersisyan; Arsen Arakelyan
Journal:  Viruses       Date:  2022-05-17       Impact factor: 5.818

5.  Identification of Omicron-Delta Coinfections Using PCR-Based Genotyping.

Authors:  Pavitra Roychoudhury; Shishi Luo; Kathleen Hayashibara; Pooneh Hajian; Margaret G Mills; Jean Lozach; Tyler Cassens; Seffir T Wendm; Isabel Arnould; David Becker; Tim Wesselman; Jeremy Davis-Turak; Richard Creager; Eric Lai; Keith R Jerome; Tracy Basler; Andrew Dei Rossi; William Lee; Alexander L Greninger
Journal:  Microbiol Spectr       Date:  2022-05-03

6.  SARS-CoV-2 ORF6 Disrupts Bidirectional Nucleocytoplasmic Transport through Interactions with Rae1 and Nup98.

Authors:  Amin Addetia; Nicole A P Lieberman; Quynh Phung; Tien-Ying Hsiang; Hong Xie; Pavitra Roychoudhury; Lasata Shrestha; Michelle A Loprieno; Meei-Li Huang; Michael Gale; Keith R Jerome; Alexander L Greninger
Journal:  mBio       Date:  2021-04-13       Impact factor: 7.867

7.  Mutations in viral nucleocapsid protein and endoRNase are discovered to associate with COVID19 hospitalization risk.

Authors:  Lue Ping Zhao; Pavitra Roychoudhury; Peter Gilbert; Joshua Schiffer; Terry P Lybrand; Thomas H Payne; April Randhawa; Sara Thiebaud; Margaret Mills; Alex Greninger; Chul-Woo Pyo; Ruihan Wang; Renyu Li; Alexander Thomas; Brandon Norris; Wyatt C Nelson; Keith R Jerome; Daniel E Geraghty
Journal:  Sci Rep       Date:  2022-01-24       Impact factor: 4.379

8.  Trajectory of Viral RNA Load Among Persons With Incident SARS-CoV-2 G614 Infection (Wuhan Strain) in Association With COVID-19 Symptom Onset and Severity.

Authors:  Helen C Stankiewicz Karita; Tracy Q Dong; Christine Johnston; Kathleen M Neuzil; Michael K Paasche-Orlow; Patricia J Kissinger; Anna Bershteyn; Lorna E Thorpe; Meagan Deming; Angelica Kottkamp; Miriam Laufer; Raphael J Landovitz; Alfred Luk; Risa Hoffman; Pavitra Roychoudhury; Craig A Magaret; Alexander L Greninger; Meei-Li Huang; Keith R Jerome; Mark Wener; Connie Celum; Helen Y Chu; Jared M Baeten; Anna Wald; Ruanne V Barnabas; Elizabeth R Brown
Journal:  JAMA Netw Open       Date:  2022-01-04

Review 9.  Clinical and Infection Prevention Applications of Severe Acute Respiratory Syndrome Coronavirus 2 Genotyping: an Infectious Diseases Society of America/American Society for Microbiology Consensus Review Document.

Authors:  Alexander L Greninger; Jennifer Dien Bard; Robert C Colgrove; Erin H Graf; Kimberly E Hanson; Mary K Hayden; Romney M Humphries; Christopher F Lowe; Melissa B Miller; Dylan R Pillai; Daniel D Rhoads; Joseph D Yao; Francesca M Lee
Journal:  J Clin Microbiol       Date:  2021-11-03       Impact factor: 11.677

Review 10.  Waning antibody responses in COVID-19: what can we learn from the analysis of other coronaviruses?

Authors:  Ali Hamady; JinJu Lee; Zuzanna A Loboda
Journal:  Infection       Date:  2021-07-29       Impact factor: 3.553
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