| Literature DB >> 33043106 |
Kraichat Tantrakarnapa1, Bhophkrit Bhopdhornangkul2.
Abstract
Coronavirus disease (COVID-19) has been identified as a pandemic by the World Health Organization (WHO). It was initially detected in Wuhan, China and spread to other cities of China and all countries. It has caused many deaths and the number of infections became greater than 18 million as of 5 August 2020. This study aimed to analyze the situation of COVID-19 in Thailand and the challenging disease control by employing a dynamic model to determine prevention approaches. We employed a statistical technique to analyze the ambient temperature influencing the cases. We found that temperature was significantly associated with daily infected cases (p-value <0.01). The SEIR (Susceptible Exposed Infectious and Recovered) dynamic approach and moving average estimation were used to forecast the daily infected and cumulative cases until 16 June as a base run analysis using STELLA dynamic software and statistical techniques. The movement of people, both in relation to local (Thai people) and foreign travel (both Thai and tourists), played a significant role in the spread of COVID-19 in Thailand. Enforcing a state of emergency and regulating social distancing were the key factors in reducing the growth rate of the disease. The SEIR model reliably predicted the actual infected cases, with a root mean square error (RMSE) of 12.8. In case of moving average approach, RMSE values were 0.21, 0.21, and 0.35 for two, three and five days, respectively. The previous records were used as input for prediction that caused lower values of RMSE. Two-days and three-days moving averages gave the better results than SEIR model. The SEIR model is suitable for longer period prediction, whereas the moving average approach is suitable for short term prediction. The implementation of interventions, such as governmental regulation and restrictions, through collaboration among various sectors was the key factor for controlling the spreading of COVID-19 in Thailand.Entities:
Keywords: COVID-19; Disease control; Moving average model; SEIR model; Spread of disease; Thailand
Year: 2020 PMID: 33043106 PMCID: PMC7538906 DOI: 10.1016/j.onehlt.2020.100173
Source DB: PubMed Journal: One Health ISSN: 2352-7714
Fig. 1SEIR modeling concept (+ the enforcement, − balancing relationship) (29).
Fig. 2Timeline of COVID-19 situation and its related events in Thailand from 12 January to 20 June 2020.
Fig. 3Occurrence of COVID-19 cases in Bangkok and other provinces (during 15 March – 4 July 2020).
Fig. 4Diagram of simple dynamic SEIR COVID-19 Thailand model.
Weather data of temperature (in degree Celsius), wind speed and precipitation in Thailand during the studied period (January-4 April 2020.
| Statistic | Max T | Min T | Mean T | WS (m/s) | Precipitation(mm) |
|---|---|---|---|---|---|
| Minimum | 31.11 | 19.10 | 25.68 | 5.16 | 5.94 |
| Q1 (Quartile) | 33.53 | 20.73 | 27.05 | 5.74 | 10.92 |
| Mean | 35.00 | 22.43 | 28.71 | 6.20 | 25.10 |
| Standard deviation | 1.69 | 1.67 | 1.57 | 0.60 | 15.51 |
| Median | 34.88 | 22.79 | 28.85 | 6.12 | 18.06 |
| Q3 (Quartile) | 36.12 | 23.85 | 29.98 | 6.57 | 38.84 |
| Maximum | 38.06 | 25.03 | 31.51 | 8.09 | 52.89 |
| CV (Coefficient of Variation, %) | 4.82 | 7.43 | 5.47 | 9.71 | 61.81 |
Spearman's correlations among weather parameters and daily accumulated COVID-19 cases.
| Minimum daily temperature | Average daily temperature | Maximum daily temperature | Daily cumulative COVID-19 cases | |
|---|---|---|---|---|
| Minimum daily temperature (Min T) | 1 | 0.912** | 0.938** | 0.732* |
| Average daily temperature (Mean T) | 1 | 0.942** | 0.751* | |
| Maximum daily temperature (Max T) | 1 | 0.694* | ||
| Daily cumulative COVID-19 cases | 1 |
Note: * p-value is 0.05, ** p-value is 0.01.
Association of cumulative COVID-19 confirmed cases and temperature with different models.
| Parameter | Correlation with Accumulate COVID case | R2 | Model | Regression model | Significance |
|---|---|---|---|---|---|
| Minimum temperature | 0.599 | 0.40 | Linear regression | −3776.45 + 181.69*Min T | <0.001 |
| 0.587 | 0.35 | Logarithmic | −11,959.65 + 3944.5*ln(Min T) | <0.001 | |
| 0.575 | 0.33 | Inverse | 4119.60–85,243.23(1/Min T) | <0.001 | |
| 0.730 | 0.53 | Quadratic | 44,466.87–4182.39*MixT+49.54*(Min T)2 | <0.001 | |
| Average temperature | 0.654 | 0.43 | Linear regression | −5745.72 + 210.52*Mean T | <0.001 |
| 0.643 | 0.41 | Logarithmic | −19,583.02 + 5924.48*ln(Mean T) | <0.001 | |
| 0.633 | 0.40 | Inverse | 6105.65–166,250.10(1/Mean T) | <0.001 | |
| 0.792 | 0.63 | Quadratic | 80,241.76–5806.13*MeaT+104.94*(Mean T)2 | <0.001 | |
| Maximum temperature | 0.624 | 0.39 | Linear regression | −6234.54 + 186.64*Max T | <0.001 |
| 0.617 | 0.38 | Logarithmic | −22,640.74 + 6453.90*ln(Max T) | <0.001 | |
| 0.609 | 0.37 | Inverse | 6668.12–222,461.09(1/Max T) | <0.001 | |
| 0.688 | 0.47 | Quadratic | 54,534.76–3287.53*Max T + 49.54*(Max T)2 | <0.001 |
Fig. 4Proportion of local infection and state quarantine of COVID-19 in Thailand.
Fig. 5Predicted infected COVID-19 cases and actual cases as of 10 June 2020.
Fig. 6Daily predicted positive COVID-19 cases and actual cases as of 10 June 2020.
Fig. 7Two, three- and five-days moving averages to predict COVID-19.
The goodness of fits of models, advantage and disadvantage of used models in this study.
| Model | Correlation of actual values and prediction values | RMSE value (%) | Advantages | Disadvantage | |
|---|---|---|---|---|---|
| SEIR (Susceptible, Exposure, Infection and Recover) | 0.84 | 12.8 | The advantages of this model are; long term prediction. | The complicated model needs various inputs and understanding. The influencing factors such as intervention and its enforcement, individual implementation are required as inputs for model simulation. | |
| Moving average | Two days | 0.98 | 0.21 | It can be used for short term prediction. | The limitation for long term prediction. |
| Three days | 0.98 | 0.21 | |||
| Five days | 0.94 | 0.23 | |||