Literature DB >> 33030102

Finding potent inhibitors for COVID-19 main protease (Mpro): an in silico approach using SARS-CoV-3CL protease inhibitors for combating CORONA.

Mohit Motiwale1, Neetu Singh Yadav2, Sushil Kumar3, Tushar Kushwaha4, Gourav Choudhir5, Supriya Sharma1, Pradeep Kumar Singour1.   

Abstract

SARS-CoV-2 is liable for the worldwide coronavirus disease (COVID-19) exigency. This pandemic created the need for all viable treatment strategies available in the market. In this scenario, computer-aided drug design techniques can be efficiently applied for the quick identification of promising drug repurposing candidates. In the current study, we applied the molecular docking approach in conjugation with molecular dynamics (MD) simulations to find out potential inhibitors against Mpro of SARS-CoV-2 from previously reported SARS-3CL protease inhibitors. Our results showed that N-substituted isatin derivatives and pyrazolone compounds could be used as a potent inhibitor and may possess an anti-viral activity against SARS-CoV-2. However, further experimental investigation and validation of the selected hits are required to find out their suitability for clinical trials. Communicated by Ramaswamy H. Sarma.

Entities:  

Keywords:  COVID-19; Coronavirus; SARS-CoV-2; main protease (Mpro); molecular dynamics simulation; molecular modeling; virtual screening

Mesh:

Substances:

Year:  2020        PMID: 33030102     DOI: 10.1080/07391102.2020.1829501

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  6 in total

Review 1.  Novel Drug Design for Treatment of COVID-19: A Systematic Review of Preclinical Studies.

Authors:  Sarah Mousavi; Shima Zare; Mahmoud Mirzaei; Awat Feizi
Journal:  Can J Infect Dis Med Microbiol       Date:  2022-09-25       Impact factor: 2.585

2.  Computational drug design of novel COVID-19 inhibitor.

Authors:  David Ebuka Arthur; Benjamin Osebi Elegbe; Augustina Oyibo Aroh; Mahmoud Soliman
Journal:  Bull Natl Res Cent       Date:  2022-07-15

3.  Molecular docking and dynamic simulations of Cefixime, Etoposide and Nebrodenside A against the pathogenic proteins of SARS-CoV-2.

Authors:  Haroon Ur Rashid; Nasir Ahmad; Mohnad Abdalla; Khalid Khan; Marco Antonio Utrera Martines; Samah Shabana
Journal:  J Mol Struct       Date:  2021-08-13       Impact factor: 3.196

4.  Repurposing of phytomedicine-derived bioactive compounds with promising anti-SARS-CoV-2 potential: Molecular docking, MD simulation and drug-likeness/ADMET studies.

Authors:  Mithun Rudrapal; Neelutpal Gogoi; Dipak Chetia; Johra Khan; Saeed Banwas; Bader Alshehri; Mohammed A Alaidarous; Umesh D Laddha; Shubham J Khairnar; Sanjay G Walode
Journal:  Saudi J Biol Sci       Date:  2021-12-13       Impact factor: 4.052

5.  Deciphering the Potential of Pre and Pro-Vitamin D of Mushrooms against Mpro and PLpro Proteases of COVID-19: An In Silico Approach.

Authors:  Abhay Tiwari; Garima Singh; Gourav Choudhir; Mohit Motiwale; Nidhi Joshi; Vasudha Sharma; Rupesh K Srivastava; Satyawati Sharma; Marco Tutone; Pradeep Kumar Singour
Journal:  Molecules       Date:  2022-08-31       Impact factor: 4.927

Review 6.  A review on computer-aided chemogenomics and drug repositioning for rational COVID-19 drug discovery.

Authors:  Saeid Maghsoudi; Bahareh Taghavi Shahraki; Fatemeh Rameh; Masoomeh Nazarabi; Yousef Fatahi; Omid Akhavan; Mohammad Rabiee; Ebrahim Mostafavi; Eder C Lima; Mohammad Reza Saeb; Navid Rabiee
Journal:  Chem Biol Drug Des       Date:  2022-09-22       Impact factor: 2.873

  6 in total

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