Literature DB >> 33016175

Cryo-EM: The Resolution Revolution and Drug Discovery.

Taiana Maia de Oliveira1, Lotte van Beek1, Fiona Shilliday1, Judit É Debreczeni1, Chris Phillips1.   

Abstract

Single-particle cryogenic electron microscopy (cryo-EM) has been elevated to the mainstream of structural biology propelled by technological advancements in numerous fronts, including imaging analysis and the development of direct electron detectors. The drug discovery field has watched with (initial) skepticism and wonder at the progression of the technique and how it revolutionized the molecular understanding of previously intractable targets. This article critically assesses how cryo-EM has impacted drug discovery in diverse therapeutic areas. Targets that have been brought into the realm of structure-based drug design by cryo-EM and are thus reviewed here include membrane proteins like the GABAA receptor, several TRP channels, and G protein-coupled receptors, and multiprotein complexes like the ribosomes, the proteasome, and eIF2B. We will describe these studies highlighting the achievements, challenges, and caveats.

Entities:  

Keywords:  cryo-EM; drug discovery; membrane proteins; multiprotein complexes

Mesh:

Year:  2020        PMID: 33016175     DOI: 10.1177/2472555220960401

Source DB:  PubMed          Journal:  SLAS Discov        ISSN: 2472-5552            Impact factor:   3.341


  8 in total

Review 1.  Molecular interactions at the colchicine binding site in tubulin: An X-ray crystallography perspective.

Authors:  Jiaxing Wang; Duane D Miller; Wei Li
Journal:  Drug Discov Today       Date:  2021-12-08       Impact factor: 7.851

2.  AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models.

Authors:  Mihaly Varadi; Stephen Anyango; Mandar Deshpande; Sreenath Nair; Cindy Natassia; Galabina Yordanova; David Yuan; Oana Stroe; Gemma Wood; Agata Laydon; Augustin Žídek; Tim Green; Kathryn Tunyasuvunakool; Stig Petersen; John Jumper; Ellen Clancy; Richard Green; Ankur Vora; Mira Lutfi; Michael Figurnov; Andrew Cowie; Nicole Hobbs; Pushmeet Kohli; Gerard Kleywegt; Ewan Birney; Demis Hassabis; Sameer Velankar
Journal:  Nucleic Acids Res       Date:  2022-01-07       Impact factor: 19.160

3.  Editorial: Tailored Modulation of Interactions Between Biomolecules: Fundamentals and Applications.

Authors:  Matteo Ardini; Paola Baiocco; Adele Di Matteo; Giorgio Giardina; Adriana Erica Miele
Journal:  Front Mol Biosci       Date:  2022-07-14

Review 4.  Insight into the Mammalian Aquaporin Interactome.

Authors:  Susanna Törnroth-Horsefield; Clara Chivasso; Helin Strandberg; Claudia D'Agostino; Carla V T O'Neale; Kevin L Schey; Christine Delporte
Journal:  Int J Mol Sci       Date:  2022-08-25       Impact factor: 6.208

Review 5.  Simulation and Machine Learning Methods for Ion-Channel Structure Determination, Mechanistic Studies and Drug Design.

Authors:  Zhengdan Zhu; Zhenfeng Deng; Qinrui Wang; Yuhang Wang; Duo Zhang; Ruihan Xu; Lvjun Guo; Han Wen
Journal:  Front Pharmacol       Date:  2022-06-28       Impact factor: 5.988

6.  Cryo-EM structure-based selection of computed ligand poses enables design of MTA-synergic PRMT5 inhibitors of better potency.

Authors:  Wei Zhou; Gaya P Yadav; Xiaozhi Yang; Feng Qin; Chenglong Li; Qiu-Xing Jiang
Journal:  Commun Biol       Date:  2022-10-03

7.  Cryo-electron structures of the extreme thermostable enzymes Sulfur Oxygenase Reductase and Lumazine Synthase.

Authors:  Mohamed A Sobhy; Lingyun Zhao; Dalaver Anjum; Ali Behzad; Masateru Takahashi; Muhammad Tehseen; Alfredo De Biasio; Rachid Sougrat; Samir Hamdan
Journal:  PLoS One       Date:  2022-10-03       Impact factor: 3.752

Review 8.  PARP Power: A Structural Perspective on PARP1, PARP2, and PARP3 in DNA Damage Repair and Nucleosome Remodelling.

Authors:  Lotte van Beek; Éilís McClay; Saleha Patel; Marianne Schimpl; Laura Spagnolo; Taiana Maia de Oliveira
Journal:  Int J Mol Sci       Date:  2021-05-12       Impact factor: 5.923

  8 in total

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