| Literature DB >> 33006005 |
Abdul Haleem Butt1,2,3, Erika Rovini1,2, Hamido Fujita4, Carlo Maremmani5, Filippo Cavallo6,7,8.
Abstract
Parkinson's disease (PD) is a progressive disorder of the central nervous system that causes motor dysfunctions in affected patients. Objective assessment of symptoms can support neurologists in fine evaluations, improving patients' quality of care. Herein, this study aimed to develop data-driven models based on regression algorithms to investigate the potential of kinematic features to predict PD severity levels. Sixty-four patients with PD (PwPD) and 50 healthy subjects of control (HC) were asked to perform 13 motor tasks from the MDS-UPDRS III while wearing wearable inertial sensors. Simultaneously, the clinician provided the evaluation of the tasks based on the MDS-UPDRS scores. One hundred-ninety kinematic features were extracted from the inertial motor data. Data processing and statistical analysis identified a set of parameters able to distinguish between HC and PwPD. Then, multiple feature selection methods allowed selecting the best subset of parameters for obtaining the greatest accuracy when used as input for several predicting regression algorithms. The maximum correlation coefficient, equal to 0.814, was obtained with the adaptive neuro-fuzzy inference system (ANFIS). Therefore, this predictive model could be useful as a decision support system for a reliable objective assessment of PD severity levels based on motion performance, improving patients monitoring over time.Entities:
Keywords: ANFIS; Artificial intelligence; Parkinson disease severity; Predictive methods; Regression models
Year: 2020 PMID: 33006005 PMCID: PMC7723941 DOI: 10.1007/s10439-020-02628-4
Source DB: PubMed Journal: Ann Biomed Eng ISSN: 0090-6964 Impact factor: 3.934
Figure 1Methodology flowchart.
Figure 2The wearable system: SensHand and SensFoot.
Extracted parameters (mean ± standard deviation) as normalized values from lower limb exercises for both PD patients and HC subjects.
| Ex | Biomechanical features | Acronym | Patients | Control | |
|---|---|---|---|---|---|
| GAIT | Gait Time Gait Strides Gait Frequency Stride Time Swing Time Stance Time Relative Stance Angular Excursion | F_GT F_GSTRD F_GF F_GSTRDT F_GSWT F_GSTT F_GRS F_GANG | 0.155 ± 0.145 0.127 ± 0.142 0.544 ± 0.222 0.127 ± 0.142 0.329 ± 0.144 0.379 ± 0.202 0.564 ± 0.183 0.671 ± 0.191 | 0.928 ± 0.426 0.661 ± 0.363 0.571 ± 0.169 0.661 ± 0.363 0.311 ± 0.104 0.385 ± 0.154 0.594 ± 0.136 0.746 ± 0.125 | 0.002* 0.000* 0.803 0.000* 0.380 0.623 0.417 0.016* |
| ROTA | Rotation Time Rotation Strides Rotation Frequency Stance Time Relative Stance | F_RT F_RSTRD F_RF F_RSTT F_RRS | 0.226 ± 0.548 0.207 ± 0.176 0.372 ± 0.211 0.207 ± 0.176 0.596 ± 0.150 | 0.787 ± 0.548 0.104 ± 0.503 0.437 ± 0.248 0.104 ± 0.503 0.552 ± 0.142 | 0.000* 0.000* 0.220 0.000* 0.127 |
| HTTP | Heel Frequency Taps Heel angle Heel Frequency CV Heel angle CV Energy Expenditure | F_HTTP_fH F_HTTP_taps F_HTTP_H-angle F_HTTP_CV-fH F_HTTP_CV-Hangle F_HTTP_IAV | 0.521 ± 0.220 0.514 ± 0.221 0.233 ± 0.199 0.539 ± 0.248 0.660 ± 0.260 0.552 ± 0.198 | 0.691 ± 0.140 0.685 ± 0.143 0.345 ± 0.215 0.507 ± 0.202 0.651 ± 0.235 0.706 ± 0.105 | 0.000* 0.000* 0.007* 0.466 0.985 0.000* |
| TTHP | Toe Frequency Taps Toe angle Toe Frequency CV Toe angle CV Energy Expenditure | F_TTHP_fT F_TTHP_taps F_TTHP_T-angle F_TTHP_CV-fT F_TTHP_CV-Tangle F_TTHP_IAV | 0.490 ± 0.212 0.532 ± 0.201 0.634 ± 0.226 0.496 ± 0.259 0.634 ± 0.226 0.670 ± 0.244 | 0.530 ± 0.194 0.581 ± 0.178 0.420 ± 0.253 0.425 ± 0.259 0.528 ± 0.283 0.820 ± 0.580 | 0.128 0.118 0.021* 0.215 0.063 0.020* |
| HETO | Toe Frequency Heel Frequency Heel-Toe Frequency Taps Toe Angle Heel Angle Heel-Toe Frequency CV Toe Angle CV Heel Angle CV Energy Expenditure | F_HETO_fTT F_HETO_fHH F_HETO_fHT F_HETO_taps F_HETO_ToeAng F_HETO_HeelAg F_HETO_fHT_Cv F_HETO_ToeAngC F_HETO_HeelAng_CV F_HETO_IAV | 0.308 ± 0.117 0.312 ± 0.117 0.315 ± 0.121 0.298 ± 0.121 0.286 ± 0.160 0.285 ± 0.151 0.330 ± 0.126 0.286 ± 0.160 0.285 ± 0.151 0.762 ± 0.182 | 0.420 ± 0.155 0.425 ± 0.154 0.426 ± 0.146 0.416 ± 0.156 0.432 ± 0.173 0.422 ± 0.169 0.370 ± 0.154 0.432 ± 0.173 0.422 ± 0.169 0.855 ± 0.076 | 0.000* 0.000* 0.000* 0.000* 0.000* 0.000* 0.152 0.000* 0.000* 0.007* |
| HEHE | Signal Average Power Fundamental Frequency Peak in PSD Energy Expenditure | F_HEHE_AVGPWR F_HEHE_FREQ F_HEHE_PEAK F_HEHE_IAV | 0.202 ± 0.229 0.282 ± 0.140 0.121 ± 0.139 0.221 ± 0.167 | 0.525 ± 0.202 0.330 ± 0.115 0.339 ± 0.196 0.441 ± 0.167 | 0.000* 0.028* 0.000* 0.000* |
Also, p values from the Mann–Whitney test are reported
*Statistical significance at 95% confidence level (p < 0.05)
Extracted parameters (mean ± standard deviation) as normalized values from upper limb exercises for both PD patients and HC subjects.
| Ex | Biomechanical features | Acronym | Patients | Control | |
|---|---|---|---|---|---|
| Hand opening/closing (OPCL) | Movement Frequency Movements Movement amplitude Opening velocity Closing velocity Variability in frequency Variability in amplitude Energy expenditure | H_fOC H_numOC H_excOC H_wop H_wcl H_fCV-OC H_tetaCV-OC H_OC-IAV | 0.398 ± 0.197 0.409 ± 0.201 0.466 ± 0.230 0.412 ± 0.221 0.373 ± 0.213 0.324 ± 0.217 0.526 ± 0.260 0.305 ± 0.258 | 0.570 ± 0.139 0.580 ± 0.139 0.425 ± 0.176 0.538 ± 0.201 0.544 ± 0.190 0.222 ± 0.124 0.502 ± 0.194 0.555 ± 0.209 | 0.000* 0.000* 0.449 0.004* 0.000* 0.033 0.877 0.000* |
| Forearm prono/supination (PSUP) | Movement Frequency Movements Movement amplitude Supination velocity Pronation velocity Variability in frequency Variability in amplitude Energy expenditure | H_fPS H_numPS H_excPS H_wps H_wsp H_fCV-PS H_tetaCV-PS H_PS-IAV | 0.399 ± 0.252 0.415 ± 0.255 0.409 ± 0.180 0.350 ± 0.202 0.340 ± 0.131 0.239 ± 0.198 0.305 ± 0.195 0.204 ± 0.173 | 0.505 ± 0.181 0.526 ± 0.179 0.634 ± 0.157 0.6515 ± 0.15 0.590 ± 0.165 0.214 ± 0.173 0.237 ± 0.189 0.468 ± 0.233 | 0.011* 0.009* 0.000* 0.000* 0.000* 0.502 0.015* 0.000* |
| Thumb-forefinger tapping (THFF) | Movement Frequency Movements Movement amplitude Opening velocity Closing velocity Variability in frequency Variability in amplitude Energy expenditure | H_fTF H_tapTF H_tetaTF H_woTF H_wcTF H_fCV-TF H_tetaCV-TF H_TF-IAV | 0.575 ± 0.219 0.562 ± 0.223 0.216 ± 0.205 0.297 ± 0.244 0.297 ± 0.243 0.436 ± 0.252 0.647 ± 0.280 0.324 ± 0.192 | 0.741 ± 0.151 0.738 ± 0.149 0.716 ± 0.129 0.322 ± 0.202 0.336 ± 0.201 0.285 ± 0.186 0.619 ± 0.233 0.436 ± 0.165 | 0.000* 0.000* 0.481 0.689 0.437 0.006* 0.689 0.006* |
| Thumb-middle finger tapping (THMF) | Tap Frequency Movements Movement amplitude Opening velocity Closing velocity Variability in frequency Variability in amplitude Energy expenditure | H_fTM H_tapTM H_tetaTM H_woTM H_wcTM H_fCV-TM H_tetaCV-TM H_TM-IAV | 0.910 ± 0.414 0.498 ± 0.234 0.159 ± 0.146 0.308 ± 0.239 0.292 ± 0.234 0.491 ± 0.254 0.626 ± 0.259 0.605 ± 0.129 | 0.127 ± 0.262 0.700 ± 0.152 0.134 ± 0.928 0.431 ± 0.214 0.431 ± 0.209 0.270 ± 0.214 0.532 ± 0.245 0.737 ± 0.107 | 0.000* 0.000* 0.612 0.010 0.003* 0.000* 0.087 0.000* |
| Arms swing arms swinging (ARMS) | Swing arms frequency Movements Movement amplitude Front velocity Back velocity Variability in frequency Variability in amplitude Energy expenditure | H_fSW H_swing H_tetaSW H_wfSW H_wbSW H_fCV-SW H_tetaCV-SW H_SW-IAV | 0.410 ± 0.133 0.304 ± 0.142 0.261 ± 0.189 0.289 ± 0.181 0.467 ± 0.260 0.343 ± 0.307 0.322 ± 0.223 0.180 ± 0.146 | 0.426 ± 0.687 0.250 ± 0.611 0.520 ± 0.223 0.492 ± 0.230 0.411 ± 0.268 0.215 ± 0.214 0.534 ± 0.206 0.152 ± 0.666 | 0.486 0.025 0.000* 0.000* 0.253 0.029 0.000* 0.347 |
| Postural tremor (POST) | Accelerometer signal power Acc fundamental freq. Acc %power band [3.5-7.5 Hz] Acc %power band [8-12 Hz] Energy expenditure Gyroscope signal power Gyr fundamental frequency Gyr %power in band [3.5-7.5 Hz] Gyr %power in band [8-12 Hz] | H_a_pwrP H_a_fP H_a_pwrpP1 H_a_pwrpP2 H_IAV-P H_g_pwrP H_g_fP H_g_pwrpP1 H_g_pwrpP2 | 0.334 ± 0.215 0.556 ± 0.168 0.334 ± 0.215 0.412 ± 0.209 0.085 ± 0.188 0.040 ± 0.190 0.483 ± 0.215 0.311 ± 0.230 0.354 ± 0.206 | 0.183 ± 0.111 0.591 ± 0.235 0.183 ± 0.111 0.501 ± 0.208 0.034 ± 0.014 0.000 ± 0.000 0.535 ± 0.271 0.159 ± 0.697 0.430 ± 0.144 | 0.000* 0.342 0.000* 0.078 0.002* 0.007* 0.276 0.000* 0.013* |
| Rest tremor (REST) | Accelerometer signal power Acc fundamental frequency Acc %power in band [3.5-7.5 Hz] Energy expenditure Gyroscope signal power Gyr fundamental frequency Gyr %power in band [3.5-7.5 Hz] | H_a_pwrR H_a_fR H_a_pwrpR2 H_IAV-R H_g_pwrR H_g_fR H_g_pwrpR2 | 0.340 ± 0.189 0.525 ± 0.246 0.244 ± 0.121 0.432 ± 0.286 0.521 ± 0.149 0.508 ± 0.213 0.435 ± 0.219 | 0.437 ± 0.210 0.542 ± 0.220 0.193 ± 0.651 0.261 ± 0.132 0.006 ± 0.116 0.512 ± 0.222 0.288 ± 0.115 | 0.041* 0.854 0.001* 0.004* 0.000* 0.948 0.000* |
Also, p values from the Mann–Whitney test are reported
*Statistical significance at 95% confidence level (p < 0.05)
Predictive accuracy of the evaluated regression methods reported as correlation coefficients using different selection feature methods.
| Feature selection method | Selected features | Regression method | |||
|---|---|---|---|---|---|
| SVR | RF | ANFIS | LR | ||
CfsSubsetEval Best first search | FL_GT; FL_GSTRD; FR_HETO_taps; HR_excPS; HR_PS-IAV; HL_fPS; HL_PS-IAV; HL_TF-IAV; HR_tapTM; HR_woTM; HL_tetaCV-SW; HR_IAV-P; HR_g_pwrpP1 | 0.799 RMSE = 0.117 | 0.790 RMSE = 0.121 | 0.814 RMSE = 0.101 | 0.738 RMSE = 0.135 |
| PCA ranker | Principal Components (PC1 – PC19) | 0.596 RMSE = 0.158 | 0.658 RMSE = 0.1506 | 0.385 RMSE = 0.217 | 0.497 RMSE = 0.181 |
| Correlation attribute evaluation | FR_GSTRD;FL_GT; FR_RSTRD;FR_RT; FL_RSTRD;FR_GANG; HR_tapTM; HL_tapTF; HR_wfSW; FL_HETO_ToeAng; HL_a_pwrR; HL_g_pwrpR2; HR_IAV-P; HR_fCV-TF; HL_a_pwrpP1 | 0.5937 Rmse = 0.158 | 0.648 Rmse = 0.146 | 0.517 Rmse = 0.1905 | 0.406 Rmse = 0.199 |
| FR_GT; FR_GSTRD; FR_GANG; FL_GT; FR_RT; FR_RSTRD; FL_RT, FL_RSTRD; FL_HETO_ToeAng; HL_TapTF; HR_tapTM; HL_tapTM; HR_wfSW; HL_g_pwrpP1; HL_g_pwrpR2 | 0.6244 RMSE = 0.1539 | 0.640 RMSE = 0.149 | 0.652 RMSE = 0.1999 | 0.475 RMSE = 0.149 | |
| Wrapper subset evaluation | FR_GT; FR_GSTRD; FR_GANG; FL_GT; FR_RSTRD; FL_RT; FL_RSTRD; FL_HETO_ToeAng; HL_tapTF; HR_tapTM; HL_tapTM; HL_a_PwrR | 0.6057 RMSE = 0.1569 | 0.606 RMSE = 0.1569 | 0.423 RMSE = 0.2262 | 0.400 RMSE = 0.1981 |