Literature DB >> 32984921

Application of artificial intelligence models and optimization algorithms in plant cell and tissue culture.

Mohsen Hesami1, Andrew Maxwell Phineas Jones2.   

Abstract

Artificial intelligence (AI) models and optimization algorithms (OA) are broadly employed in different fields of technology and science and have recently been applied to improve different stages of plant tissue culture. The usefulness of the application of AI-OA has been demonstrated in the prediction and optimization of length and number of microshoots or roots, biomass in plant cell cultures or hairy root culture, and optimization of environmental conditions to achieve maximum productivity and efficiency, as well as classification of microshoots and somatic embryos. Despite its potential, the use of AI and OA in this field has been limited due to complex definition terms and computational algorithms. Therefore, a systematic review to unravel modeling and optimizing methods is important for plant researchers and has been acknowledged in this study. First, the main steps for AI-OA development (from data selection to evaluation of prediction and classification models), as well as several AI models such as artificial neural networks (ANNs), neurofuzzy logic, support vector machines (SVMs), decision trees, random forest (FR), and genetic algorithms (GA), have been represented. Then, the application of AI-OA models in different steps of plant tissue culture has been discussed and highlighted. This review also points out limitations in the application of AI-OA in different plant tissue culture processes and provides a new view for future study objectives. KEY POINTS: • Artificial intelligence models and optimization algorithms can be considered a novel and reliable computational method in plant tissue culture. • This review provides the main steps and concepts for model development. • The application of machine learning algorithms in different steps of plant tissue culture has been discussed and highlighted.

Keywords:  Androgenesis; Computational approach; Data-driven model; Embryogenesis; In vitro culture; Machine learning algorithm; Organogenesis; Plant biotechnology; Rhizogenesis; Shoot proliferation

Mesh:

Year:  2020        PMID: 32984921     DOI: 10.1007/s00253-020-10888-2

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  25 in total

1.  Modeling and optimizing callus growth and development in Cannabis sativa using random forest and support vector machine in combination with a genetic algorithm.

Authors:  Mohsen Hesami; Andrew Maxwell Phineas Jones
Journal:  Appl Microbiol Biotechnol       Date:  2021-06-04       Impact factor: 4.813

Review 2.  Machine learning: its challenges and opportunities in plant system biology.

Authors:  Mohsen Hesami; Milad Alizadeh; Andrew Maxwell Phineas Jones; Davoud Torkamaneh
Journal:  Appl Microbiol Biotechnol       Date:  2022-05-16       Impact factor: 4.813

Review 3.  Traditional in vitro strategies for sustainable production of bioactive compounds and manipulation of metabolomic profile in medicinal, aromatic and ornamental plants.

Authors:  Mohsen Niazian; Paolo Sabbatini
Journal:  Planta       Date:  2021-10-30       Impact factor: 4.116

4.  Artificial Neural Networks Elucidated the Essential Role of Mineral Nutrients versus Vitamins and Plant Growth Regulators in Achieving Healthy Micropropagated Plants.

Authors:  Tomás A Arteta; Radhia Hameg; Mariana Landin; Pedro P Gallego; M Esther Barreal
Journal:  Plants (Basel)       Date:  2022-05-11

Review 5.  The Past, Present and Future of Cannabis sativa Tissue Culture.

Authors:  Adrian S Monthony; Serena R Page; Mohsen Hesami; Andrew Maxwell P Jones
Journal:  Plants (Basel)       Date:  2021-01-19

6.  Application of Machine Learning Algorithms in Plant Breeding: Predicting Yield From Hyperspectral Reflectance in Soybean.

Authors:  Mohsen Yoosefzadeh-Najafabadi; Hugh J Earl; Dan Tulpan; John Sulik; Milad Eskandari
Journal:  Front Plant Sci       Date:  2021-01-12       Impact factor: 5.753

7.  A hybrid model based on general regression neural network and fruit fly optimization algorithm for forecasting and optimizing paclitaxel biosynthesis in Corylus avellana cell culture.

Authors:  Mina Salehi; Siamak Farhadi; Ahmad Moieni; Naser Safaie; Mohsen Hesami
Journal:  Plant Methods       Date:  2021-02-05       Impact factor: 4.993

Review 8.  Advances and Perspectives in Tissue Culture and Genetic Engineering of Cannabis.

Authors:  Mohsen Hesami; Austin Baiton; Milad Alizadeh; Marco Pepe; Davoud Torkamaneh; Andrew Maxwell Phineas Jones
Journal:  Int J Mol Sci       Date:  2021-05-26       Impact factor: 5.923

Review 9.  Next Generation Cereal Crop Yield Enhancement: From Knowledge of Inflorescence Development to Practical Engineering by Genome Editing.

Authors:  Lei Liu; Penelope L Lindsay; David Jackson
Journal:  Int J Mol Sci       Date:  2021-05-13       Impact factor: 5.923

10.  The application of artificial neural networks in modeling and predicting the effects of melatonin on morphological responses of citrus to drought stress.

Authors:  Marziyeh Jafari; Alireza Shahsavar
Journal:  PLoS One       Date:  2020-10-14       Impact factor: 3.240

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