| Literature DB >> 32982061 |
Sudhanshu Kumar Biswas1, Jayanta Kumar Ghosh2, Susmita Sarkar2, Uttam Ghosh2.
Abstract
The present novel coronavirus (SARS-CoV-2) infection has created a global emergency situation by spreading all over the world in a large scale within very short time period. But there is no vaccine, anti-viral medicine for such infection. So at this moment, a major worldwide problem is that how we can control this pandemic. On the other hand, India is high population density country, where the coronavirus infection disease (COVID-19) has started from 1 March 2020. Due to high population density, human to human social contact rate is very high in India. So controlling pandemic COVID-19 in early stage is very urgent and challenging problem of India. Mathematical models are employed to study the disease dynamics, identify the influential parameters and access the proper prevention strategies for reduction outbreak size. In this work, we have formulated a deterministic compartmental model to study the spreading of COVID-19 and estimated the model parameters by fitting the model with reported data of ongoing pandemic in India. Sensitivity analysis has been done to identify the influential model parameters. The basic reproduction number has been estimated from actual data and the effective basic reproduction number has been studied on the basis of reported cases. Some effective preventive measures and their impact have also been studied. Prediction are given on the future trends of the virus transmission under some control measures. Finally, the positive measures to control the disease have been summarized in the conclusion section. © Springer Nature B.V. 2020.Entities:
Keywords: Asymptomatic class; Basic reproduction number; COVID-19; Prevention measure; Quarantine; Sensitivity analysis
Year: 2020 PMID: 32982061 PMCID: PMC7505224 DOI: 10.1007/s11071-020-05958-z
Source DB: PubMed Journal: Nonlinear Dyn ISSN: 0924-090X Impact factor: 5.022
Fig. 1Flow diagram of disease transmission of COVID-19
Interpretations of the model parameters
| State variables/parameters | Biological meaning |
|---|---|
| Abundance of susceptible population at time | |
| Abundance of exposed population at time | |
| Abundance of asymptomatic infected population at time | |
| Abundance of symptomatic infected population but not quarantined at time | |
| Abundance of symptomatic infected population and quarantined at time | |
| Abundance of hospitalised and isolated infected population at time | |
| Abundance of recovered population at time | |
| Proportion of susceptible population who obey lockdown strictly | |
| Proportion of quarantine and isolation effect on effective contact rate, respectively | |
| Ratio of the virus transmission rate to infected population | |
| Virus transmission rate from symptomatic infected to susceptible population | |
| Rate of conversion from exposed to | |
| Rates of hospitalisation from symptomatic and quarantined infected populations, respectively | |
| Recovery rates from asymptomatic, symptomatic, quarantined and hospitalised infected populations, respectively | |
| Recruitment rate of human | |
| Normal and disease-induced death rate of human, respectively |
Fig. 2a Model simulation to the cumulative reported cases from 1 March to 24 April 2020 in India, the red dots denote the reported infected cases and blue line presents the model predicted infected cases b Residuals of the corresponding data fitting
List of the model parameters and their sensitivity indices for COVID-19 pandemic in India, estimated from the data from 1st March to 24th April 2020
| Parameters | Values | Source | Sensitivity indices |
|---|---|---|---|
| 67446.82054 | [ | – | |
| 0.0000391 | [ | − 0.00076 | |
| 1.11525 | Estimated | 1.000000000 | |
| 0.08275 | Estimated | 0.44301 | |
| 0.35872 | Estimated | − 0.08026 | |
| 0.33511 | Estimated | − 0.36270 | |
| 0.03435 | Estimated | − 0.54894 | |
| 0.01496 | Estimated | − 0.01794 | |
| 0.05481 | Estimated | − 0.00619 | |
| 0.09310 | Estimated | − 0.08415 | |
| 0.26190 | Estimated | − 0.25181 | |
| 0.51323 | Estimated | 0.00152 | |
| 0.04142 | Estimated | − 0.09177 | |
| 0.94 | Assumed | − 0.14651 | |
| 0.90 | Assumed | − 1.09464 | |
| 0.80576 | Estimated | 0.54957 | |
| 0.52674 | Estimated | − 1.11299 | |
| 2.39745 | Estimated | 1.00000 |
Fig. 3a Model simulation to the cumulative reported cases from 25 March to 24 April 2020 in India, the red dots denote the reported infected cases and blue line presents the model predicted infected cases b Residuals of the corresponding data fitting
List of the model parameters and their sensitivity indices for COVID-19 pandemic in India estimated from the data from 25 March to 24 April 2020
| Parameters | Values | Source | Sensitivity indices |
|---|---|---|---|
| 67446.82054 | [ | – | |
| 0.0000391 | [ | − 0.00065 | |
| 0.88689 | Estimated | 1.0000 | |
| 0.24176 | Estimated | 0.44295 | |
| 0.24757 | Estimated | − 0.13547 | |
| 0.26556 | Estimated | − 0.30743 | |
| 0.05311 | Estimated | − 0.76262 | |
| 0.05090 | Estimated | − 0.02561 | |
| 0.05071 | Estimated | − 0.00435 | |
| 0.07048 | Estimated | − 0.03394 | |
| 0.26267 | Estimated | − 0.10165 | |
| 0.39787 | Estimated | 0.00255 | |
| 0.06891 | Estimated | − 0.07377 | |
| 0.94 | Assumed | − 0.12070 | |
| 0.90 | Assumed | − 0.60436 | |
| 0.67047 | Estimated | 0.76318 | |
| 0.48576 | Estimated | − 0.94461 | |
| 2.41419 | Estimated | 1.00000 |
Fig. 4Bar diagram of the daily infected cases where red bar denotes the reported case and blue bar denotes the model predicted case from a set-1 parameter values b set-2 parameter values, for 25th April to 10th May 2020
Fig. 5Time series for the a cumulative number of infected population and b different infected population using the estimated parametric values and same initial condition
Fig. 6(a) The time series of new cases of COVID-19 and (b) the daily number of cases against the cumulative number of cases
Fig. 7Effective reproduction number
Fig. 8a Total outbreak size and b Peak prevalence during the pandemic predicted by the model for the prevention programs on reducing proportion of social distance among human
Fig. 9a Total outbreak size and b Peak prevalence during the pandemic predicted by the model for the prevention programs on reducing proportion of social distance among human
Fig. 10Time series of total outbreak size for a original parameter (solid line) and increase values (dash line) of and and b original parameter (solid line) and increase values (dash line) of and
Fig. 11Time series for a cumulative number of infected population due to control apply from 25 April 2020 (blue dash line) b time series of infected classes due to control apply from 25 April 2020 (dash line)