Literature DB >> 32966858

Cell type-specific circular RNA expression in human glial cells.

Ashton Curry-Hyde1, Lachlan G Gray1, Bei Jun Chen2, Uwe Ueberham3, Thomas Arendt3, Michael Janitz4.   

Abstract

The circular transcriptome of human glial cells is an area of neuroscience that has not been thoroughly elucidated. Circular RNAs (circRNAs) have the potential to facilitate the understanding of vast, complex and unknown mechanisms derived from the human transcriptome, including elements of the human brain that are not known and the evolution of the human brain, the complexities of which are not well understood. Moreover, the glial cells have been determined to contribute to human brain evolution. This study presents the first comprehensive analysis of the human brain glia circRNA transcriptome, that is, astrocytes, microglia and oligodendrocytes. After stringent criteria applied to the detection of circRNAs, it was found that the circular transcriptomes of these glia are unique from one another, and hence might be indicative of distinct roles for circRNAs within the brain. This study found 265, 239 and 442 circRNAs comprising the unique circular transcriptome of astrocytes, microglia and oligodendrocytes, respectively. The most abundant circRNAs in these glial cell types are expressed by parent genes co-expressing linear RNAs in low abundance, suggesting spliceosome activity favorable to the back-splicing mechanism instead of canonical splicing activity.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Astrocytes; Circular RNAs; Circular transcriptome; Microglia; Oligodendrocytes; RNA-seq

Year:  2020        PMID: 32966858     DOI: 10.1016/j.ygeno.2020.09.042

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  4 in total

Review 1.  The heterogeneity of microglial activation and its epigenetic and non-coding RNA regulations in the immunopathogenesis of neurodegenerative diseases.

Authors:  Chaoyi Li; Jie Ren; Mengfei Zhang; Huakun Wang; Fang Yi; Junjiao Wu; Yu Tang
Journal:  Cell Mol Life Sci       Date:  2022-09-06       Impact factor: 9.207

Review 2.  Insights into the multifaceted role of circular RNAs: implications for Parkinson's disease pathogenesis and diagnosis.

Authors:  Epaminondas Doxakis
Journal:  NPJ Parkinsons Dis       Date:  2022-01-10

3.  Accurate identification of circRNA landscape and complexity reveals their pivotal roles in human oligodendroglia differentiation.

Authors:  Yangping Li; Feng Wang; Peng Teng; Li Ku; Li Chen; Yue Feng; Bing Yao
Journal:  Genome Biol       Date:  2022-02-07       Impact factor: 17.906

Review 4.  Glial changes in schizophrenia: Genetic and epigenetic approach.

Authors:  Ramos Daniel Francisco; Vazquez Fernando; Estrada Norma; Méndez Edna Madai; Barraza Marcelo
Journal:  Indian J Psychiatry       Date:  2022-01-21       Impact factor: 1.759

  4 in total

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